RNA–Protein interactions for RNA: ENST00000520736.1

GINS4-207, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 375 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-207ENST00000520736 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.67
GINS4-207ENST00000520736 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.09
GINS4-207ENST00000520736 ABCC9O60706 1549 aa26.85■■□□□ 1.89
GINS4-207ENST00000520736 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
GINS4-207ENST00000520736 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
GINS4-207ENST00000520736 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
GINS4-207ENST00000520736 NACADO15069 1562 aa26.25■■□□□ 1.79
GINS4-207ENST00000520736 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
GINS4-207ENST00000520736 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
GINS4-207ENST00000520736 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
GINS4-207ENST00000520736 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
GINS4-207ENST00000520736 BICRAQ9NZM4 1560 aa25.41■■□□□ 1.66
GINS4-207ENST00000520736 SHROOM4Q9ULL8 1493 aa25.25■■□□□ 1.63
GINS4-207ENST00000520736 PABPN1Q86U42 306 aaKnown RBP eCLIP25.04■■□□□ 1.6
GINS4-207ENST00000520736 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
GINS4-207ENST00000520736 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
GINS4-207ENST00000520736 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
GINS4-207ENST00000520736 BAZ1AQ9NRL2 1556 aaPredicted RBP24.55■■□□□ 1.52
GINS4-207ENST00000520736 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
GINS4-207ENST00000520736 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
GINS4-207ENST00000520736 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
GINS4-207ENST00000520736 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
GINS4-207ENST00000520736 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
GINS4-207ENST00000520736 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
GINS4-207ENST00000520736 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
GINS4-207ENST00000520736 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
GINS4-207ENST00000520736 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
GINS4-207ENST00000520736 WIZO95785 1651 aa24.18■■□□□ 1.46
GINS4-207ENST00000520736 BAZ1BQ9UIG0 1483 aaKnown RBP24.04■■□□□ 1.44
GINS4-207ENST00000520736 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
GINS4-207ENST00000520736 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
GINS4-207ENST00000520736 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
GINS4-207ENST00000520736 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
GINS4-207ENST00000520736 CFTRP13569 1480 aa23.46■■□□□ 1.35
GINS4-207ENST00000520736 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
GINS4-207ENST00000520736 CADPSQ9ULU8 1353 aa23.43■■□□□ 1.34
GINS4-207ENST00000520736 NESP48681 1621 aa23.41■■□□□ 1.34
GINS4-207ENST00000520736 KIF21AQ7Z4S6 1674 aa23.25■■□□□ 1.31
GINS4-207ENST00000520736 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
GINS4-207ENST00000520736 FANCD2Q9BXW9 1451 aa23.18■■□□□ 1.3
GINS4-207ENST00000520736 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
GINS4-207ENST00000520736 THOC2Q8NI27 1593 aaKnown RBP23.12■■□□□ 1.29
GINS4-207ENST00000520736 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
GINS4-207ENST00000520736 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
GINS4-207ENST00000520736 MRC2Q9UBG0 1479 aa23.03■■□□□ 1.28
GINS4-207ENST00000520736 WDR62O43379 1518 aa23.01■■□□□ 1.27
GINS4-207ENST00000520736 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
GINS4-207ENST00000520736 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
GINS4-207ENST00000520736 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
GINS4-207ENST00000520736 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
GINS4-207ENST00000520736 CUX1P39880 1505 aa22.89■■□□□ 1.26
GINS4-207ENST00000520736 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
GINS4-207ENST00000520736 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
GINS4-207ENST00000520736 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
GINS4-207ENST00000520736 WRNQ14191 1432 aaPredicted RBP eCLIP22.84■■□□□ 1.25
GINS4-207ENST00000520736 CUX2O14529 1486 aa22.84■■□□□ 1.25
GINS4-207ENST00000520736 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
GINS4-207ENST00000520736 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
GINS4-207ENST00000520736 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
GINS4-207ENST00000520736 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
GINS4-207ENST00000520736 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
GINS4-207ENST00000520736 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
GINS4-207ENST00000520736 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
GINS4-207ENST00000520736 SOGA1O94964 1423 aa22.54■■□□□ 1.2
GINS4-207ENST00000520736 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
GINS4-207ENST00000520736 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
GINS4-207ENST00000520736 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
GINS4-207ENST00000520736 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
GINS4-207ENST00000520736 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
GINS4-207ENST00000520736 PBRM1Q86U86 1689 aa22.39■■□□□ 1.18
GINS4-207ENST00000520736 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
GINS4-207ENST00000520736 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
GINS4-207ENST00000520736 AQRO60306 1485 aaKnown RBP eCLIP22.33■■□□□ 1.16
GINS4-207ENST00000520736 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
GINS4-207ENST00000520736 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
GINS4-207ENST00000520736 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
GINS4-207ENST00000520736 MAGI1Q96QZ7 1491 aaPredicted RBP22.24■■□□□ 1.15
GINS4-207ENST00000520736 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
GINS4-207ENST00000520736 EEA1Q15075 1411 aa22.23■■□□□ 1.15
GINS4-207ENST00000520736 RUSC2Q8N2Y8 1516 aa22.23■■□□□ 1.15
GINS4-207ENST00000520736 CUL7Q14999 1698 aa22.23■■□□□ 1.15
GINS4-207ENST00000520736 SNAPC4Q5SXM2 1469 aa22.21■■□□□ 1.15
GINS4-207ENST00000520736 IGF1RP08069 1367 aa22.15■■□□□ 1.14
GINS4-207ENST00000520736 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
GINS4-207ENST00000520736 CHD1O14646 1710 aa22.12■■□□□ 1.13
GINS4-207ENST00000520736 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
GINS4-207ENST00000520736 PRXQ9BXM0 1461 aa22.07■■□□□ 1.12
GINS4-207ENST00000520736 GRIN2AQ12879 1464 aa22.04■■□□□ 1.12
GINS4-207ENST00000520736 KIF21BO75037 1637 aa22.04■■□□□ 1.12
GINS4-207ENST00000520736 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
GINS4-207ENST00000520736 RAPGEF2Q9Y4G8 1499 aa21.98■■□□□ 1.11
GINS4-207ENST00000520736 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
GINS4-207ENST00000520736 NUP160Q12769 1436 aa21.96■■□□□ 1.11
GINS4-207ENST00000520736 CEP170Q5SW79 1584 aa21.95■■□□□ 1.1
GINS4-207ENST00000520736 CLASP1Q7Z460 1538 aa21.92■■□□□ 1.1
GINS4-207ENST00000520736 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
GINS4-207ENST00000520736 CTTNBP2Q8WZ74 1663 aa21.88■■□□□ 1.09
GINS4-207ENST00000520736 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
GINS4-207ENST00000520736 GOLGA3Q08378 1498 aa21.83■■□□□ 1.09
GINS4-207ENST00000520736 SHROOM2Q13796 1616 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms