RNA–Protein interactions for RNA: ENST00000520275.1

LINC01187-202, Transcript of long intergenic non-protein coding RNA 1187, humanhuman

TSL 3

Gene LINC01187, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01187-202ENST00000520275 NISCHQ9Y2I1 1504 aa11.5□□□□□ -0.57
LINC01187-202ENST00000520275 AEBP2Q6ZN18 517 aaPredicted RBP10.86□□□□□ -0.67
LINC01187-202ENST00000520275 CHIC1Q5VXU3 224 aa10.46□□□□□ -0.73
LINC01187-202ENST00000520275 ABCC9O60706 1549 aa10.35□□□□□ -0.75
LINC01187-202ENST00000520275 CCDC180Q9P1Z9 1646 aa10.3□□□□□ -0.76
LINC01187-202ENST00000520275 RB1CC1Q8TDY2 1594 aa9.8□□□□□ -0.84
LINC01187-202ENST00000520275 DCAF8L2P0C7V8 631 aa9.74□□□□□ -0.85
LINC01187-202ENST00000520275 DNAJC5BQ9UF47 199 aa9.74□□□□□ -0.85
LINC01187-202ENST00000520275 NACADO15069 1562 aa9.74□□□□□ -0.85
LINC01187-202ENST00000520275 UNC13AQ9UPW8 1703 aa9.66□□□□□ -0.86
LINC01187-202ENST00000520275 PABPN1Q86U42 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC01187-202ENST00000520275 MYO15BQ96JP2 1530 aa9.56□□□□□ -0.88
LINC01187-202ENST00000520275 BICRAQ9NZM4 1560 aa9.56□□□□□ -0.88
LINC01187-202ENST00000520275 ZCCHC6Q5VYS8 1495 aaKnown RBP9.53□□□□□ -0.88
LINC01187-202ENST00000520275 DCAF1Q9Y4B6 1507 aa9.46□□□□□ -0.89
LINC01187-202ENST00000520275 SCRIBQ14160 1630 aa9.43□□□□□ -0.9
LINC01187-202ENST00000520275 CC2D2AQ9P2K1 1620 aa9.34□□□□□ -0.91
LINC01187-202ENST00000520275 SHROOM4Q9ULL8 1493 aa9.34□□□□□ -0.91
LINC01187-202ENST00000520275 EIF4G1Q04637 1599 aaKnown RBP9.31□□□□□ -0.92
LINC01187-202ENST00000520275 CECR2Q9BXF3 1484 aa9.3□□□□□ -0.92
LINC01187-202ENST00000520275 PHF23Q9BUL5 403 aaPredicted RBP9.27□□□□□ -0.93
LINC01187-202ENST00000520275 SENP3Q9H4L4 574 aaPredicted RBP9.09□□□□□ -0.95
LINC01187-202ENST00000520275 NCAPD3P42695 1498 aa8.99□□□□□ -0.97
LINC01187-202ENST00000520275 ATAD2BQ9ULI0 1458 aa8.99□□□□□ -0.97
LINC01187-202ENST00000520275 SMARCA4P51532 1647 aa8.98□□□□□ -0.97
LINC01187-202ENST00000520275 SMARCA2P51531 1590 aa8.93□□□□□ -0.98
LINC01187-202ENST00000520275 HMGXB3Q12766 1538 aa8.92□□□□□ -0.98
LINC01187-202ENST00000520275 BAZ1AQ9NRL2 1556 aaPredicted RBP8.91□□□□□ -0.98
LINC01187-202ENST00000520275 NESP48681 1621 aa8.91□□□□□ -0.98
LINC01187-202ENST00000520275 ERCC6Q03468 1493 aa8.9□□□□□ -0.98
LINC01187-202ENST00000520275 DNAJC5Q9H3Z4 198 aa8.89□□□□□ -0.99
LINC01187-202ENST00000520275 MROH2BQ7Z745 1585 aa8.89□□□□□ -0.99
LINC01187-202ENST00000520275 BAZ1BQ9UIG0 1483 aaKnown RBP8.88□□□□□ -0.99
LINC01187-202ENST00000520275 PEG3Q9GZU2 1588 aa8.86□□□□□ -0.99
LINC01187-202ENST00000520275 CUX2O14529 1486 aa8.86□□□□□ -0.99
LINC01187-202ENST00000520275 WIZO95785 1651 aa8.8□□□□□ -1
LINC01187-202ENST00000520275 KIF21AQ7Z4S6 1674 aa8.79□□□□□ -1
LINC01187-202ENST00000520275 THOC2Q8NI27 1593 aaKnown RBP8.79□□□□□ -1
LINC01187-202ENST00000520275 LAMC3Q9Y6N6 1575 aa8.78□□□□□ -1
LINC01187-202ENST00000520275 CADPSQ9ULU8 1353 aa8.73□□□□□ -1.01
LINC01187-202ENST00000520275 PDS5BQ9NTI5 1447 aa8.72□□□□□ -1.01
LINC01187-202ENST00000520275 RSF1Q96T23 1441 aaPredicted RBP8.69□□□□□ -1.02
LINC01187-202ENST00000520275 MRC2Q9UBG0 1479 aa8.67□□□□□ -1.02
LINC01187-202ENST00000520275 WDR62O43379 1518 aa8.65□□□□□ -1.02
LINC01187-202ENST00000520275 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
LINC01187-202ENST00000520275 FANCD2Q9BXW9 1451 aa8.64□□□□□ -1.03
LINC01187-202ENST00000520275 CEP164Q9UPV0 1460 aa8.64□□□□□ -1.03
LINC01187-202ENST00000520275 CFTRP13569 1480 aa8.63□□□□□ -1.03
LINC01187-202ENST00000520275 PLPPR3Q6T4P5 718 aa8.61□□□□□ -1.03
LINC01187-202ENST00000520275 URB2Q14146 1524 aaKnown RBP8.59□□□□□ -1.03
LINC01187-202ENST00000520275 PRDM2Q13029 1718 aa8.57□□□□□ -1.04
LINC01187-202ENST00000520275 CCDC88BA6NC98 1476 aa8.57□□□□□ -1.04
LINC01187-202ENST00000520275 FOXD1Q16676 465 aa8.54□□□□□ -1.04
LINC01187-202ENST00000520275 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
LINC01187-202ENST00000520275 ZNF608Q9ULD9 1512 aaPredicted RBP8.49□□□□□ -1.05
LINC01187-202ENST00000520275 TOPBP1Q92547 1522 aa8.48□□□□□ -1.05
LINC01187-202ENST00000520275 OSCARQ8IYS5 282 aa8.47□□□□□ -1.05
LINC01187-202ENST00000520275 IFT140Q96RY7 1462 aa8.45□□□□□ -1.06
LINC01187-202ENST00000520275 DNMBPQ6XZF7 1577 aa8.44□□□□□ -1.06
LINC01187-202ENST00000520275 EIF4G3O43432 1585 aaKnown RBP8.42□□□□□ -1.06
LINC01187-202ENST00000520275 TARBP1Q13395 1621 aaKnown RBP8.41□□□□□ -1.06
LINC01187-202ENST00000520275 ABCC8Q09428 1581 aa8.4□□□□□ -1.06
LINC01187-202ENST00000520275 AQRO60306 1485 aaKnown RBP eCLIP8.4□□□□□ -1.06
LINC01187-202ENST00000520275 RIMBP3CA6NJZ7 1639 aa8.4□□□□□ -1.07
LINC01187-202ENST00000520275 RIMBP3BA6NNM3 1639 aa8.4□□□□□ -1.07
LINC01187-202ENST00000520275 RIMBP3Q9UFD9 1639 aa8.4□□□□□ -1.07
LINC01187-202ENST00000520275 POLA1P09884 1462 aaPredicted RBP8.39□□□□□ -1.07
LINC01187-202ENST00000520275 RAD54L2Q9Y4B4 1467 aa8.38□□□□□ -1.07
LINC01187-202ENST00000520275 CHD1O14646 1710 aa8.38□□□□□ -1.07
LINC01187-202ENST00000520275 ARHGEF11O15085 1522 aa8.36□□□□□ -1.07
LINC01187-202ENST00000520275 SOGA1O94964 1423 aa8.35□□□□□ -1.07
LINC01187-202ENST00000520275 TDRD9Q8NDG6 1382 aaKnown RBP8.35□□□□□ -1.07
LINC01187-202ENST00000520275 CUX1P39880 1505 aa8.34□□□□□ -1.07
LINC01187-202ENST00000520275 FGD5Q6ZNL6 1462 aa8.34□□□□□ -1.07
LINC01187-202ENST00000520275 SUPT5HO00267 1087 aaKnown RBP8.34□□□□□ -1.07
LINC01187-202ENST00000520275 FBLN2P98095 1184 aa8.34□□□□□ -1.07
LINC01187-202ENST00000520275 CYB5RLQ6IPT4 315 aa8.31□□□□□ -1.08
LINC01187-202ENST00000520275 SNAPC4Q5SXM2 1469 aa8.3□□□□□ -1.08
LINC01187-202ENST00000520275 ARAP1Q96P48 1450 aa8.29□□□□□ -1.08
LINC01187-202ENST00000520275 WDR97A6NE52 1622 aa8.29□□□□□ -1.08
LINC01187-202ENST00000520275 PBRM1Q86U86 1689 aa8.27□□□□□ -1.09
LINC01187-202ENST00000520275 GRIN2BQ13224 1484 aa8.26□□□□□ -1.09
LINC01187-202ENST00000520275 CLASP1Q7Z460 1538 aa8.26□□□□□ -1.09
LINC01187-202ENST00000520275 CHMP7Q8WUX9 453 aaPredicted RBP8.25□□□□□ -1.09
LINC01187-202ENST00000520275 GAPVD1Q14C86 1478 aa8.25□□□□□ -1.09
LINC01187-202ENST00000520275 MAGI1Q96QZ7 1491 aaPredicted RBP8.25□□□□□ -1.09
LINC01187-202ENST00000520275 ABCA5Q8WWZ7 1642 aa8.24□□□□□ -1.09
LINC01187-202ENST00000520275 SYNJ1O43426 1573 aa8.23□□□□□ -1.09
LINC01187-202ENST00000520275 SYNJ2O15056 1496 aa8.23□□□□□ -1.09
LINC01187-202ENST00000520275 ABCA10Q8WWZ4 1543 aa8.23□□□□□ -1.09
LINC01187-202ENST00000520275 PPP6R1Q9UPN7 881 aa8.21□□□□□ -1.1
LINC01187-202ENST00000520275 TRHP20396 242 aaPredicted RBP8.2□□□□□ -1.1
LINC01187-202ENST00000520275 BIVM-ERCC5R4GMW8 1640 aa8.2□□□□□ -1.1
LINC01187-202ENST00000520275 TOP2BQ02880 1626 aa8.19□□□□□ -1.1
LINC01187-202ENST00000520275 WRNQ14191 1432 aaPredicted RBP eCLIP8.19□□□□□ -1.1
LINC01187-202ENST00000520275 ADRA2BP18089 450 aa8.17□□□□□ -1.1
LINC01187-202ENST00000520275 ADAMTS12P58397 1594 aa8.17□□□□□ -1.1
LINC01187-202ENST00000520275 ERCC6L2Q5T890 1561 aa8.17□□□□□ -1.1
LINC01187-202ENST00000520275 GRIN2AQ12879 1464 aa8.16□□□□□ -1.1
LINC01187-202ENST00000520275 CEP170Q5SW79 1584 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms