RNA–Protein interactions for RNA: ENST00000520178.3

CNOT7-208, Transcript of CCR4-NOT transcription complex subunit 7, humanhuman

TSL 5

Gene CNOT7, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT7-208ENST00000520178 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
CNOT7-208ENST00000520178 ABCC9O60706 1549 aa26.07■■□□□ 1.76
CNOT7-208ENST00000520178 CCDC180Q9P1Z9 1646 aa25.74■■□□□ 1.71
CNOT7-208ENST00000520178 DNAJC5BQ9UF47 199 aa24.94■■□□□ 1.58
CNOT7-208ENST00000520178 RB1CC1Q8TDY2 1594 aa24.69■■□□□ 1.54
CNOT7-208ENST00000520178 NACADO15069 1562 aa24.38■■□□□ 1.49
CNOT7-208ENST00000520178 UNC13AQ9UPW8 1703 aa24.29■■□□□ 1.48
CNOT7-208ENST00000520178 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
CNOT7-208ENST00000520178 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
CNOT7-208ENST00000520178 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.41
CNOT7-208ENST00000520178 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
CNOT7-208ENST00000520178 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
CNOT7-208ENST00000520178 CC2D2AQ9P2K1 1620 aa23.63■■□□□ 1.37
CNOT7-208ENST00000520178 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
CNOT7-208ENST00000520178 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
CNOT7-208ENST00000520178 DNAJC5Q9H3Z4 198 aa23.41■■□□□ 1.34
CNOT7-208ENST00000520178 DCAF1Q9Y4B6 1507 aa23.33■■□□□ 1.33
CNOT7-208ENST00000520178 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
CNOT7-208ENST00000520178 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
CNOT7-208ENST00000520178 CUX2O14529 1486 aa22.84■■□□□ 1.25
CNOT7-208ENST00000520178 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
CNOT7-208ENST00000520178 NCAPD3P42695 1498 aa22.46■■□□□ 1.19
CNOT7-208ENST00000520178 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
CNOT7-208ENST00000520178 THOC2Q8NI27 1593 aaKnown RBP22.28■■□□□ 1.16
CNOT7-208ENST00000520178 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
CNOT7-208ENST00000520178 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
CNOT7-208ENST00000520178 NESP48681 1621 aa22.23■■□□□ 1.15
CNOT7-208ENST00000520178 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
CNOT7-208ENST00000520178 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
CNOT7-208ENST00000520178 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
CNOT7-208ENST00000520178 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
CNOT7-208ENST00000520178 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
CNOT7-208ENST00000520178 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
CNOT7-208ENST00000520178 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.1
CNOT7-208ENST00000520178 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
CNOT7-208ENST00000520178 WDR62O43379 1518 aa21.8■■□□□ 1.08
CNOT7-208ENST00000520178 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.08
CNOT7-208ENST00000520178 CADPSQ9ULU8 1353 aa21.68■■□□□ 1.06
CNOT7-208ENST00000520178 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
CNOT7-208ENST00000520178 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
CNOT7-208ENST00000520178 OSCARQ8IYS5 282 aa21.55■■□□□ 1.04
CNOT7-208ENST00000520178 RIMBP3CA6NJZ7 1639 aa21.48■■□□□ 1.03
CNOT7-208ENST00000520178 RIMBP3BA6NNM3 1639 aa21.48■■□□□ 1.03
CNOT7-208ENST00000520178 RIMBP3Q9UFD9 1639 aa21.48■■□□□ 1.03
CNOT7-208ENST00000520178 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.03
CNOT7-208ENST00000520178 WIZO95785 1651 aa21.44■■□□□ 1.02
CNOT7-208ENST00000520178 CFTRP13569 1480 aa21.36■■□□□ 1.01
CNOT7-208ENST00000520178 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
CNOT7-208ENST00000520178 URB2Q14146 1524 aaKnown RBP21.33■■□□□ 1
CNOT7-208ENST00000520178 ARHGEF11O15085 1522 aa21.31■■□□□ 1
CNOT7-208ENST00000520178 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
CNOT7-208ENST00000520178 TOP2AP11388 1531 aaKnown RBP21.13■□□□□ 0.97
CNOT7-208ENST00000520178 ZNF608Q9ULD9 1512 aaPredicted RBP21.13■□□□□ 0.97
CNOT7-208ENST00000520178 CHD1O14646 1710 aa21.12■□□□□ 0.97
CNOT7-208ENST00000520178 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
CNOT7-208ENST00000520178 CYB5RLQ6IPT4 315 aa21.04■□□□□ 0.96
CNOT7-208ENST00000520178 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
CNOT7-208ENST00000520178 TOPBP1Q92547 1522 aa21.01■□□□□ 0.95
CNOT7-208ENST00000520178 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
CNOT7-208ENST00000520178 TRHP20396 242 aaPredicted RBP20.98■□□□□ 0.95
CNOT7-208ENST00000520178 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
CNOT7-208ENST00000520178 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
CNOT7-208ENST00000520178 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
CNOT7-208ENST00000520178 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
CNOT7-208ENST00000520178 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.93
CNOT7-208ENST00000520178 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
CNOT7-208ENST00000520178 CLASP1Q7Z460 1538 aa20.79■□□□□ 0.92
CNOT7-208ENST00000520178 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
CNOT7-208ENST00000520178 POLA1P09884 1462 aaPredicted RBP20.74■□□□□ 0.91
CNOT7-208ENST00000520178 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
CNOT7-208ENST00000520178 FBLN2P98095 1184 aa20.71■□□□□ 0.91
CNOT7-208ENST00000520178 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
CNOT7-208ENST00000520178 MAGI1Q96QZ7 1491 aaPredicted RBP20.63■□□□□ 0.89
CNOT7-208ENST00000520178 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
CNOT7-208ENST00000520178 SOGA1O94964 1423 aa20.58■□□□□ 0.88
CNOT7-208ENST00000520178 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
CNOT7-208ENST00000520178 PBRM1Q86U86 1689 aa20.55■□□□□ 0.88
CNOT7-208ENST00000520178 SYNJ2O15056 1496 aa20.55■□□□□ 0.88
CNOT7-208ENST00000520178 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
CNOT7-208ENST00000520178 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
CNOT7-208ENST00000520178 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
CNOT7-208ENST00000520178 FGD5Q6ZNL6 1462 aa20.51■□□□□ 0.87
CNOT7-208ENST00000520178 KIF13AQ9H1H9 1805 aa20.46■□□□□ 0.87
CNOT7-208ENST00000520178 CUX1P39880 1505 aa20.42■□□□□ 0.86
CNOT7-208ENST00000520178 ABCA5Q8WWZ7 1642 aa20.38■□□□□ 0.85
CNOT7-208ENST00000520178 ERCC6L2Q5T890 1561 aa20.35■□□□□ 0.85
CNOT7-208ENST00000520178 SHROOM2Q13796 1616 aa20.32■□□□□ 0.84
CNOT7-208ENST00000520178 CEP170Q5SW79 1584 aa20.31■□□□□ 0.84
CNOT7-208ENST00000520178 ABCA10Q8WWZ4 1543 aa20.28■□□□□ 0.84
CNOT7-208ENST00000520178 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
CNOT7-208ENST00000520178 NUP160Q12769 1436 aa20.24■□□□□ 0.83
CNOT7-208ENST00000520178 ADAMTS12P58397 1594 aa20.24■□□□□ 0.83
CNOT7-208ENST00000520178 ABCC10Q5T3U5 1492 aa20.1■□□□□ 0.81
CNOT7-208ENST00000520178 DIP2BQ9P265 1576 aa20.09■□□□□ 0.81
CNOT7-208ENST00000520178 MAPKBP1O60336 1514 aa20.09■□□□□ 0.81
CNOT7-208ENST00000520178 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
CNOT7-208ENST00000520178 KDM6BO15054 1643 aa20.06■□□□□ 0.8
CNOT7-208ENST00000520178 ERICH3Q5RHP9 1530 aa20.05■□□□□ 0.8
CNOT7-208ENST00000520178 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
CNOT7-208ENST00000520178 TSPOAP1O95153 1857 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms