RNA–Protein interactions for RNA: ENST00000520141.5

CDK16-214, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-214ENST00000520141 NISCHQ9Y2I1 1504 aa32.39■■■□□ 2.78
CDK16-214ENST00000520141 ABCC9O60706 1549 aa29.26■■■□□ 2.27
CDK16-214ENST00000520141 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.23
CDK16-214ENST00000520141 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
CDK16-214ENST00000520141 DCAF8L2P0C7V8 631 aa27.68■■■□□ 2.02
CDK16-214ENST00000520141 DNAJC5BQ9UF47 199 aa27.58■■■□□ 2.01
CDK16-214ENST00000520141 NACADO15069 1562 aa27.5■■□□□ 1.99
CDK16-214ENST00000520141 PABPN1Q86U42 306 aaKnown RBP eCLIP27.33■■□□□ 1.972e-11■■□□□ 14
CDK16-214ENST00000520141 UNC13AQ9UPW8 1703 aa27.1■■□□□ 1.93
CDK16-214ENST00000520141 MYO15BQ96JP2 1530 aa27.01■■□□□ 1.91
CDK16-214ENST00000520141 BICRAQ9NZM4 1560 aa26.9■■□□□ 1.9
CDK16-214ENST00000520141 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
CDK16-214ENST00000520141 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
CDK16-214ENST00000520141 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
CDK16-214ENST00000520141 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
CDK16-214ENST00000520141 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
CDK16-214ENST00000520141 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
CDK16-214ENST00000520141 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
CDK16-214ENST00000520141 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
CDK16-214ENST00000520141 DNAJC5Q9H3Z4 198 aa25.36■■□□□ 1.65
CDK16-214ENST00000520141 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
CDK16-214ENST00000520141 ERCC6Q03468 1493 aa25.27■■□□□ 1.64
CDK16-214ENST00000520141 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
CDK16-214ENST00000520141 SMARCA2P51531 1590 aa25.24■■□□□ 1.63
CDK16-214ENST00000520141 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
CDK16-214ENST00000520141 CUX2O14529 1486 aa25.15■■□□□ 1.62
CDK16-214ENST00000520141 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
CDK16-214ENST00000520141 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
CDK16-214ENST00000520141 NESP48681 1621 aa25.1■■□□□ 1.61
CDK16-214ENST00000520141 MROH2BQ7Z745 1585 aa24.99■■□□□ 1.59
CDK16-214ENST00000520141 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
CDK16-214ENST00000520141 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
CDK16-214ENST00000520141 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
CDK16-214ENST00000520141 THOC2Q8NI27 1593 aaKnown RBP24.74■■□□□ 1.55
CDK16-214ENST00000520141 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
CDK16-214ENST00000520141 WIZO95785 1651 aa24.69■■□□□ 1.54
CDK16-214ENST00000520141 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
CDK16-214ENST00000520141 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
CDK16-214ENST00000520141 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.51
CDK16-214ENST00000520141 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
CDK16-214ENST00000520141 WDR62O43379 1518 aa24.39■■□□□ 1.49
CDK16-214ENST00000520141 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
CDK16-214ENST00000520141 CFTRP13569 1480 aa24.33■■□□□ 1.49
CDK16-214ENST00000520141 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
CDK16-214ENST00000520141 TOP2AP11388 1531 aaKnown RBP24.31■■□□□ 1.48
CDK16-214ENST00000520141 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
CDK16-214ENST00000520141 OSCARQ8IYS5 282 aa24.16■■□□□ 1.46
CDK16-214ENST00000520141 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
CDK16-214ENST00000520141 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
CDK16-214ENST00000520141 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
CDK16-214ENST00000520141 IFT140Q96RY7 1462 aa23.92■■□□□ 1.42
CDK16-214ENST00000520141 TOPBP1Q92547 1522 aa23.91■■□□□ 1.42
CDK16-214ENST00000520141 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
CDK16-214ENST00000520141 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
CDK16-214ENST00000520141 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
CDK16-214ENST00000520141 FBLN2P98095 1184 aa23.73■■□□□ 1.39
CDK16-214ENST00000520141 RIMBP3CA6NJZ7 1639 aa23.73■■□□□ 1.39
CDK16-214ENST00000520141 RIMBP3BA6NNM3 1639 aa23.73■■□□□ 1.39
CDK16-214ENST00000520141 RIMBP3Q9UFD9 1639 aa23.73■■□□□ 1.39
CDK16-214ENST00000520141 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
CDK16-214ENST00000520141 TARBP1Q13395 1621 aaKnown RBP23.66■■□□□ 1.38
CDK16-214ENST00000520141 POLA1P09884 1462 aaPredicted RBP23.64■■□□□ 1.38
CDK16-214ENST00000520141 CYB5RLQ6IPT4 315 aa23.64■■□□□ 1.37
CDK16-214ENST00000520141 RAD54L2Q9Y4B4 1467 aa23.63■■□□□ 1.37
CDK16-214ENST00000520141 SOGA1O94964 1423 aa23.63■■□□□ 1.37
CDK16-214ENST00000520141 ARHGEF11O15085 1522 aa23.63■■□□□ 1.37
CDK16-214ENST00000520141 TDRD9Q8NDG6 1382 aaKnown RBP23.61■■□□□ 1.37
CDK16-214ENST00000520141 CHD1O14646 1710 aa23.6■■□□□ 1.37
CDK16-214ENST00000520141 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
CDK16-214ENST00000520141 FGD5Q6ZNL6 1462 aa23.51■■□□□ 1.35
CDK16-214ENST00000520141 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
CDK16-214ENST00000520141 CUX1P39880 1505 aa23.46■■□□□ 1.35
CDK16-214ENST00000520141 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
CDK16-214ENST00000520141 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
CDK16-214ENST00000520141 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
CDK16-214ENST00000520141 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
CDK16-214ENST00000520141 WDR97A6NE52 1622 aa23.33■■□□□ 1.33
CDK16-214ENST00000520141 MAGI1Q96QZ7 1491 aaPredicted RBP23.33■■□□□ 1.33
CDK16-214ENST00000520141 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
CDK16-214ENST00000520141 SYNJ1O43426 1573 aa23.29■■□□□ 1.32
CDK16-214ENST00000520141 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
CDK16-214ENST00000520141 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
CDK16-214ENST00000520141 PBRM1Q86U86 1689 aa23.22■■□□□ 1.31
CDK16-214ENST00000520141 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
CDK16-214ENST00000520141 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
CDK16-214ENST00000520141 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
CDK16-214ENST00000520141 GRIN2AQ12879 1464 aa23.05■■□□□ 1.28
CDK16-214ENST00000520141 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
CDK16-214ENST00000520141 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
CDK16-214ENST00000520141 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
CDK16-214ENST00000520141 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
CDK16-214ENST00000520141 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
CDK16-214ENST00000520141 NUP160Q12769 1436 aa22.95■■□□□ 1.26
CDK16-214ENST00000520141 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
CDK16-214ENST00000520141 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.26
CDK16-214ENST00000520141 JPH4Q96JJ6 628 aa22.88■■□□□ 1.25
CDK16-214ENST00000520141 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
CDK16-214ENST00000520141 AEBP2Q6ZN18 517 aaPredicted RBP22.82■■□□□ 1.24
CDK16-214ENST00000520141 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
CDK16-214ENST00000520141 NPM1P06748 294 aaKnown RBP eCLIP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms