RNA–Protein interactions for RNA: ENST00000519903.5

CNOT8-212, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 4

Gene CNOT8, Length 648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-212ENST00000519903 NISCHQ9Y2I1 1504 aa32.7■■■□□ 2.83
CNOT8-212ENST00000519903 CCDC180Q9P1Z9 1646 aa29.14■■■□□ 2.26
CNOT8-212ENST00000519903 ABCC9O60706 1549 aa28.48■■■□□ 2.15
CNOT8-212ENST00000519903 RB1CC1Q8TDY2 1594 aa27.44■■□□□ 1.98
CNOT8-212ENST00000519903 NACADO15069 1562 aa27.41■■□□□ 1.98
CNOT8-212ENST00000519903 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
CNOT8-212ENST00000519903 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.95
CNOT8-212ENST00000519903 ZCCHC6Q5VYS8 1495 aaKnown RBP27.23■■□□□ 1.95
CNOT8-212ENST00000519903 DCAF1Q9Y4B6 1507 aa27.11■■□□□ 1.93
CNOT8-212ENST00000519903 UNC13AQ9UPW8 1703 aa26.81■■□□□ 1.88
CNOT8-212ENST00000519903 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
CNOT8-212ENST00000519903 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
CNOT8-212ENST00000519903 SCRIBQ14160 1630 aa26.51■■□□□ 1.83
CNOT8-212ENST00000519903 SHROOM4Q9ULL8 1493 aa26.37■■□□□ 1.81
CNOT8-212ENST00000519903 DNAJC5BQ9UF47 199 aa26.18■■□□□ 1.78
CNOT8-212ENST00000519903 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
CNOT8-212ENST00000519903 CC2D2AQ9P2K1 1620 aa25.8■■□□□ 1.72
CNOT8-212ENST00000519903 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
CNOT8-212ENST00000519903 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
CNOT8-212ENST00000519903 SMARCA4P51532 1647 aa25.39■■□□□ 1.66
CNOT8-212ENST00000519903 BAZ1AQ9NRL2 1556 aaPredicted RBP25.37■■□□□ 1.65
CNOT8-212ENST00000519903 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
CNOT8-212ENST00000519903 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
CNOT8-212ENST00000519903 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
CNOT8-212ENST00000519903 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
CNOT8-212ENST00000519903 PEG3Q9GZU2 1588 aa25.17■■□□□ 1.62
CNOT8-212ENST00000519903 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
CNOT8-212ENST00000519903 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
CNOT8-212ENST00000519903 WIZO95785 1651 aa24.91■■□□□ 1.58
CNOT8-212ENST00000519903 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
CNOT8-212ENST00000519903 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
CNOT8-212ENST00000519903 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
CNOT8-212ENST00000519903 LAMC3Q9Y6N6 1575 aa24.63■■□□□ 1.53
CNOT8-212ENST00000519903 NESP48681 1621 aa24.62■■□□□ 1.53
CNOT8-212ENST00000519903 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
CNOT8-212ENST00000519903 CADPSQ9ULU8 1353 aa24.53■■□□□ 1.52
CNOT8-212ENST00000519903 PDS5BQ9NTI5 1447 aa24.46■■□□□ 1.51
CNOT8-212ENST00000519903 CUX2O14529 1486 aa24.38■■□□□ 1.49
CNOT8-212ENST00000519903 CFTRP13569 1480 aa24.38■■□□□ 1.49
CNOT8-212ENST00000519903 KIF21AQ7Z4S6 1674 aa24.37■■□□□ 1.49
CNOT8-212ENST00000519903 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
CNOT8-212ENST00000519903 THOC2Q8NI27 1593 aaKnown RBP24.31■■□□□ 1.48
CNOT8-212ENST00000519903 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
CNOT8-212ENST00000519903 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
CNOT8-212ENST00000519903 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
CNOT8-212ENST00000519903 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
CNOT8-212ENST00000519903 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
CNOT8-212ENST00000519903 WDR62O43379 1518 aa24.13■■□□□ 1.45
CNOT8-212ENST00000519903 URB2Q14146 1524 aaKnown RBP23.98■■□□□ 1.43
CNOT8-212ENST00000519903 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
CNOT8-212ENST00000519903 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
CNOT8-212ENST00000519903 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
CNOT8-212ENST00000519903 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
CNOT8-212ENST00000519903 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
CNOT8-212ENST00000519903 CUX1P39880 1505 aa23.63■■□□□ 1.37
CNOT8-212ENST00000519903 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
CNOT8-212ENST00000519903 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
CNOT8-212ENST00000519903 ZNF608Q9ULD9 1512 aaPredicted RBP23.57■■□□□ 1.36
CNOT8-212ENST00000519903 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
CNOT8-212ENST00000519903 SOGA1O94964 1423 aa23.54■■□□□ 1.36
CNOT8-212ENST00000519903 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
CNOT8-212ENST00000519903 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
CNOT8-212ENST00000519903 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
CNOT8-212ENST00000519903 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
CNOT8-212ENST00000519903 BIVM-ERCC5R4GMW8 1640 aa23.44■■□□□ 1.34
CNOT8-212ENST00000519903 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
CNOT8-212ENST00000519903 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.347e-8■□□□□ 10.3
CNOT8-212ENST00000519903 SYNJ1O43426 1573 aa23.39■■□□□ 1.33
CNOT8-212ENST00000519903 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
CNOT8-212ENST00000519903 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
CNOT8-212ENST00000519903 OSCARQ8IYS5 282 aa23.35■■□□□ 1.33
CNOT8-212ENST00000519903 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
CNOT8-212ENST00000519903 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
CNOT8-212ENST00000519903 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
CNOT8-212ENST00000519903 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
CNOT8-212ENST00000519903 PBRM1Q86U86 1689 aa23.23■■□□□ 1.31
CNOT8-212ENST00000519903 SNAPC4Q5SXM2 1469 aa23.23■■□□□ 1.31
CNOT8-212ENST00000519903 CHD1O14646 1710 aa23.22■■□□□ 1.31
CNOT8-212ENST00000519903 FBLN2P98095 1184 aa23.16■■□□□ 1.3
CNOT8-212ENST00000519903 SYNJ2O15056 1496 aa23.14■■□□□ 1.29
CNOT8-212ENST00000519903 CHMP7Q8WUX9 453 aaPredicted RBP23.13■■□□□ 1.29
CNOT8-212ENST00000519903 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
CNOT8-212ENST00000519903 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
CNOT8-212ENST00000519903 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
CNOT8-212ENST00000519903 KIF27Q86VH2 1401 aa23■■□□□ 1.27
CNOT8-212ENST00000519903 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
CNOT8-212ENST00000519903 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
CNOT8-212ENST00000519903 RIMBP3CA6NJZ7 1639 aa22.97■■□□□ 1.27
CNOT8-212ENST00000519903 RIMBP3BA6NNM3 1639 aa22.97■■□□□ 1.27
CNOT8-212ENST00000519903 RIMBP3Q9UFD9 1639 aa22.97■■□□□ 1.27
CNOT8-212ENST00000519903 ARHGEF11O15085 1522 aa22.95■■□□□ 1.26
CNOT8-212ENST00000519903 IGF1RP08069 1367 aa22.89■■□□□ 1.26
CNOT8-212ENST00000519903 NUP160Q12769 1436 aa22.89■■□□□ 1.25
CNOT8-212ENST00000519903 CUL7Q14999 1698 aa22.87■■□□□ 1.25
CNOT8-212ENST00000519903 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
CNOT8-212ENST00000519903 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
CNOT8-212ENST00000519903 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
CNOT8-212ENST00000519903 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
CNOT8-212ENST00000519903 SHROOM2Q13796 1616 aa22.72■■□□□ 1.23
CNOT8-212ENST00000519903 CYB5RLQ6IPT4 315 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms