RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 NISCHQ9Y2I1 1504 aa36.83■■■■□ 3.49
FBXO28-204ENST00000519894 AEBP2Q6ZN18 517 aaPredicted RBP35.46■■■■□ 3.27
FBXO28-204ENST00000519894 CHIC1Q5VXU3 224 aa33.09■■■□□ 2.89
FBXO28-204ENST00000519894 CCDC180Q9P1Z9 1646 aa32.83■■■□□ 2.85
FBXO28-204ENST00000519894 ABCC9O60706 1549 aa32.46■■■□□ 2.79
FBXO28-204ENST00000519894 RB1CC1Q8TDY2 1594 aa31.06■■■□□ 2.56
FBXO28-204ENST00000519894 NACADO15069 1562 aa30.96■■■□□ 2.55
FBXO28-204ENST00000519894 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
FBXO28-204ENST00000519894 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
FBXO28-204ENST00000519894 ZCCHC6Q5VYS8 1495 aaKnown RBP30.61■■■□□ 2.49
FBXO28-204ENST00000519894 DCAF1Q9Y4B6 1507 aa30.43■■■□□ 2.46
FBXO28-204ENST00000519894 UNC13AQ9UPW8 1703 aa30.38■■■□□ 2.45
FBXO28-204ENST00000519894 SENP3Q9H4L4 574 aaPredicted RBP30.33■■■□□ 2.45
FBXO28-204ENST00000519894 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
FBXO28-204ENST00000519894 BICRAQ9NZM4 1560 aa30.17■■■□□ 2.42
FBXO28-204ENST00000519894 DNAJC5BQ9UF47 199 aa30.15■■■□□ 2.42
FBXO28-204ENST00000519894 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
FBXO28-204ENST00000519894 PHF23Q9BUL5 403 aaPredicted RBP29.85■■■□□ 2.37
FBXO28-204ENST00000519894 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
FBXO28-204ENST00000519894 EIF4G1Q04637 1599 aaKnown RBP29.38■■■□□ 2.29
FBXO28-204ENST00000519894 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
FBXO28-204ENST00000519894 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
FBXO28-204ENST00000519894 SMARCA4P51532 1647 aa28.62■■■□□ 2.17
FBXO28-204ENST00000519894 NCAPD3P42695 1498 aa28.59■■■□□ 2.17
FBXO28-204ENST00000519894 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
FBXO28-204ENST00000519894 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
FBXO28-204ENST00000519894 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
FBXO28-204ENST00000519894 MROH2BQ7Z745 1585 aa28.4■■■□□ 2.14
FBXO28-204ENST00000519894 HMGXB3Q12766 1538 aa28.39■■■□□ 2.14
FBXO28-204ENST00000519894 FOXD1Q16676 465 aa28.39■■■□□ 2.14
FBXO28-204ENST00000519894 PEG3Q9GZU2 1588 aa28.35■■■□□ 2.13
FBXO28-204ENST00000519894 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
FBXO28-204ENST00000519894 WIZO95785 1651 aa28.07■■■□□ 2.08
FBXO28-204ENST00000519894 NESP48681 1621 aa28.02■■■□□ 2.08
FBXO28-204ENST00000519894 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
FBXO28-204ENST00000519894 RSF1Q96T23 1441 aaPredicted RBP27.96■■■□□ 2.07
FBXO28-204ENST00000519894 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
FBXO28-204ENST00000519894 CUX2O14529 1486 aa27.79■■■□□ 2.04
FBXO28-204ENST00000519894 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
FBXO28-204ENST00000519894 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
FBXO28-204ENST00000519894 PDS5BQ9NTI5 1447 aa27.69■■■□□ 2.02
FBXO28-204ENST00000519894 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
FBXO28-204ENST00000519894 THOC2Q8NI27 1593 aaKnown RBP27.63■■■□□ 2.01
FBXO28-204ENST00000519894 POTEDQ86YR6 584 aa27.57■■■□□ 2
FBXO28-204ENST00000519894 CFTRP13569 1480 aa27.51■■■□□ 2
FBXO28-204ENST00000519894 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
FBXO28-204ENST00000519894 MRC2Q9UBG0 1479 aa27.43■■□□□ 1.98
FBXO28-204ENST00000519894 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
FBXO28-204ENST00000519894 CEP164Q9UPV0 1460 aa27.39■■□□□ 1.98
FBXO28-204ENST00000519894 DNAJC5Q9H3Z4 198 aa27.35■■□□□ 1.97
FBXO28-204ENST00000519894 WDR62O43379 1518 aa27.35■■□□□ 1.97
FBXO28-204ENST00000519894 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
FBXO28-204ENST00000519894 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
FBXO28-204ENST00000519894 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
FBXO28-204ENST00000519894 TOPBP1Q92547 1522 aa26.95■■□□□ 1.91
FBXO28-204ENST00000519894 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
FBXO28-204ENST00000519894 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
FBXO28-204ENST00000519894 MSH5O43196 834 aa26.84■■□□□ 1.89
FBXO28-204ENST00000519894 IFT140Q96RY7 1462 aa26.84■■□□□ 1.89
FBXO28-204ENST00000519894 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
FBXO28-204ENST00000519894 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
FBXO28-204ENST00000519894 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
FBXO28-204ENST00000519894 CUX1P39880 1505 aa26.65■■□□□ 1.86
FBXO28-204ENST00000519894 OSCARQ8IYS5 282 aa26.62■■□□□ 1.85
FBXO28-204ENST00000519894 EIF4G3O43432 1585 aaKnown RBP26.62■■□□□ 1.85
FBXO28-204ENST00000519894 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
FBXO28-204ENST00000519894 SOGA1O94964 1423 aa26.6■■□□□ 1.85
FBXO28-204ENST00000519894 AQRO60306 1485 aaKnown RBP eCLIP26.6■■□□□ 1.851e-6■□□□□ 8.5
FBXO28-204ENST00000519894 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
FBXO28-204ENST00000519894 TDRD9Q8NDG6 1382 aaKnown RBP26.49■■□□□ 1.83
FBXO28-204ENST00000519894 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
FBXO28-204ENST00000519894 CHD1O14646 1710 aa26.35■■□□□ 1.81
FBXO28-204ENST00000519894 WRNQ14191 1432 aaPredicted RBP eCLIP26.35■■□□□ 1.81
FBXO28-204ENST00000519894 PIAS4Q8N2W9 510 aaPredicted RBP26.34■■□□□ 1.81
FBXO28-204ENST00000519894 FBLN2P98095 1184 aa26.32■■□□□ 1.8
FBXO28-204ENST00000519894 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
FBXO28-204ENST00000519894 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
FBXO28-204ENST00000519894 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
FBXO28-204ENST00000519894 TOP2BQ02880 1626 aa26.31■■□□□ 1.8
FBXO28-204ENST00000519894 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
FBXO28-204ENST00000519894 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
FBXO28-204ENST00000519894 TRIM41Q8WV44 630 aa26.3■■□□□ 1.8
FBXO28-204ENST00000519894 GAPVD1Q14C86 1478 aa26.27■■□□□ 1.8
FBXO28-204ENST00000519894 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
FBXO28-204ENST00000519894 ABCA5Q8WWZ7 1642 aa26.23■■□□□ 1.79
FBXO28-204ENST00000519894 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
FBXO28-204ENST00000519894 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
FBXO28-204ENST00000519894 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
FBXO28-204ENST00000519894 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
FBXO28-204ENST00000519894 CHMP7Q8WUX9 453 aaPredicted RBP26.2■■□□□ 1.78
FBXO28-204ENST00000519894 ARHGEF11O15085 1522 aa26.17■■□□□ 1.78
FBXO28-204ENST00000519894 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
FBXO28-204ENST00000519894 CLASP1Q7Z460 1538 aa26.07■■□□□ 1.76
FBXO28-204ENST00000519894 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
FBXO28-204ENST00000519894 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
FBXO28-204ENST00000519894 CYB5RLQ6IPT4 315 aa25.98■■□□□ 1.75
FBXO28-204ENST00000519894 GRIN2AQ12879 1464 aa25.97■■□□□ 1.75
FBXO28-204ENST00000519894 PPP6R1Q9UPN7 881 aa25.96■■□□□ 1.75
FBXO28-204ENST00000519894 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
FBXO28-204ENST00000519894 ARAP1Q96P48 1450 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms