RNA–Protein interactions for RNA: ENST00000519633.1

PSD3-209, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 3

Gene PSD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-209ENST00000519633 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
PSD3-209ENST00000519633 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
PSD3-209ENST00000519633 ABCC9O60706 1549 aa27.94■■■□□ 2.06
PSD3-209ENST00000519633 RB1CC1Q8TDY2 1594 aa26.7■■□□□ 1.86
PSD3-209ENST00000519633 NACADO15069 1562 aa26.58■■□□□ 1.85
PSD3-209ENST00000519633 DCAF8L2P0C7V8 631 aa26.52■■□□□ 1.84
PSD3-209ENST00000519633 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
PSD3-209ENST00000519633 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
PSD3-209ENST00000519633 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
PSD3-209ENST00000519633 DNAJC5BQ9UF47 199 aa26.07■■□□□ 1.76
PSD3-209ENST00000519633 DCAF1Q9Y4B6 1507 aa26.03■■□□□ 1.76
PSD3-209ENST00000519633 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
PSD3-209ENST00000519633 BICRAQ9NZM4 1560 aa25.88■■□□□ 1.73
PSD3-209ENST00000519633 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
PSD3-209ENST00000519633 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
PSD3-209ENST00000519633 EIF4G1Q04637 1599 aaKnown RBP25.25■■□□□ 1.63
PSD3-209ENST00000519633 CC2D2AQ9P2K1 1620 aa25.24■■□□□ 1.63
PSD3-209ENST00000519633 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
PSD3-209ENST00000519633 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
PSD3-209ENST00000519633 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
PSD3-209ENST00000519633 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
PSD3-209ENST00000519633 SMARCA4P51532 1647 aa24.47■■□□□ 1.51
PSD3-209ENST00000519633 SMARCA2P51531 1590 aa24.43■■□□□ 1.5
PSD3-209ENST00000519633 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
PSD3-209ENST00000519633 HMGXB3Q12766 1538 aa24.36■■□□□ 1.49
PSD3-209ENST00000519633 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
PSD3-209ENST00000519633 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
PSD3-209ENST00000519633 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
PSD3-209ENST00000519633 ERCC6Q03468 1493 aa24.14■■□□□ 1.46
PSD3-209ENST00000519633 NESP48681 1621 aa24.05■■□□□ 1.44
PSD3-209ENST00000519633 CUX2O14529 1486 aa24.05■■□□□ 1.44
PSD3-209ENST00000519633 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
PSD3-209ENST00000519633 WIZO95785 1651 aa23.9■■□□□ 1.42
PSD3-209ENST00000519633 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
PSD3-209ENST00000519633 DNAJC5Q9H3Z4 198 aa23.84■■□□□ 1.41
PSD3-209ENST00000519633 CADPSQ9ULU8 1353 aa23.83■■□□□ 1.41
PSD3-209ENST00000519633 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.4
PSD3-209ENST00000519633 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
PSD3-209ENST00000519633 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
PSD3-209ENST00000519633 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
PSD3-209ENST00000519633 CFTRP13569 1480 aa23.58■■□□□ 1.37
PSD3-209ENST00000519633 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.37
PSD3-209ENST00000519633 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
PSD3-209ENST00000519633 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
PSD3-209ENST00000519633 WDR62O43379 1518 aa23.51■■□□□ 1.35
PSD3-209ENST00000519633 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
PSD3-209ENST00000519633 URB2Q14146 1524 aaKnown RBP23.3■■□□□ 1.32
PSD3-209ENST00000519633 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
PSD3-209ENST00000519633 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
PSD3-209ENST00000519633 TOPBP1Q92547 1522 aa23.09■■□□□ 1.29
PSD3-209ENST00000519633 IFT140Q96RY7 1462 aa23.07■■□□□ 1.28
PSD3-209ENST00000519633 OSCARQ8IYS5 282 aa23.03■■□□□ 1.28
PSD3-209ENST00000519633 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
PSD3-209ENST00000519633 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
PSD3-209ENST00000519633 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
PSD3-209ENST00000519633 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
PSD3-209ENST00000519633 POLA1P09884 1462 aaPredicted RBP22.87■■□□□ 1.25
PSD3-209ENST00000519633 TARBP1Q13395 1621 aaKnown RBP22.84■■□□□ 1.25
PSD3-209ENST00000519633 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
PSD3-209ENST00000519633 EIF4G3O43432 1585 aaKnown RBP22.83■■□□□ 1.25
PSD3-209ENST00000519633 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
PSD3-209ENST00000519633 SOGA1O94964 1423 aa22.81■■□□□ 1.24
PSD3-209ENST00000519633 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
PSD3-209ENST00000519633 FGD5Q6ZNL6 1462 aa22.75■■□□□ 1.23
PSD3-209ENST00000519633 CUX1P39880 1505 aa22.75■■□□□ 1.23
PSD3-209ENST00000519633 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
PSD3-209ENST00000519633 FBLN2P98095 1184 aa22.66■■□□□ 1.22
PSD3-209ENST00000519633 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
PSD3-209ENST00000519633 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
PSD3-209ENST00000519633 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
PSD3-209ENST00000519633 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
PSD3-209ENST00000519633 ARHGEF11O15085 1522 aa22.58■■□□□ 1.21
PSD3-209ENST00000519633 CHD1O14646 1710 aa22.58■■□□□ 1.21
PSD3-209ENST00000519633 GRIN2BQ13224 1484 aa22.57■■□□□ 1.2
PSD3-209ENST00000519633 SNAPC4Q5SXM2 1469 aa22.57■■□□□ 1.2
PSD3-209ENST00000519633 MAGI1Q96QZ7 1491 aaPredicted RBP22.55■■□□□ 1.2
PSD3-209ENST00000519633 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
PSD3-209ENST00000519633 ABCA10Q8WWZ4 1543 aa22.52■■□□□ 1.2
PSD3-209ENST00000519633 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.2
PSD3-209ENST00000519633 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
PSD3-209ENST00000519633 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
PSD3-209ENST00000519633 CYB5RLQ6IPT4 315 aa22.45■■□□□ 1.18
PSD3-209ENST00000519633 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
PSD3-209ENST00000519633 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
PSD3-209ENST00000519633 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
PSD3-209ENST00000519633 BIVM-ERCC5R4GMW8 1640 aa22.41■■□□□ 1.18
PSD3-209ENST00000519633 CLASP1Q7Z460 1538 aa22.4■■□□□ 1.18
PSD3-209ENST00000519633 PBRM1Q86U86 1689 aa22.39■■□□□ 1.17
PSD3-209ENST00000519633 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
PSD3-209ENST00000519633 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
PSD3-209ENST00000519633 FHAD1B1AJZ9 1412 aa22.25■■□□□ 1.15
PSD3-209ENST00000519633 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
PSD3-209ENST00000519633 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
PSD3-209ENST00000519633 NUP160Q12769 1436 aa22.2■■□□□ 1.14
PSD3-209ENST00000519633 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
PSD3-209ENST00000519633 CEP170Q5SW79 1584 aa22.13■■□□□ 1.13
PSD3-209ENST00000519633 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
PSD3-209ENST00000519633 IGF1RP08069 1367 aa22.04■■□□□ 1.12
PSD3-209ENST00000519633 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
PSD3-209ENST00000519633 SHROOM2Q13796 1616 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms