RNA–Protein interactions for RNA: ENST00000519126.1

TMPRSS4-206, Transcript of transmembrane serine protease 4, humanhuman

TSL 1 (best)

Gene TMPRSS4, Length 847 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-206ENST00000519126 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
TMPRSS4-206ENST00000519126 AEBP2Q6ZN18 517 aaPredicted RBP28.89■■■□□ 2.22
TMPRSS4-206ENST00000519126 ABCC9O60706 1549 aa27.31■■□□□ 1.96
TMPRSS4-206ENST00000519126 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
TMPRSS4-206ENST00000519126 CCDC180Q9P1Z9 1646 aa26.64■■□□□ 1.85
TMPRSS4-206ENST00000519126 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
TMPRSS4-206ENST00000519126 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
TMPRSS4-206ENST00000519126 NACADO15069 1562 aa25.35■■□□□ 1.65
TMPRSS4-206ENST00000519126 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.65
TMPRSS4-206ENST00000519126 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
TMPRSS4-206ENST00000519126 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
TMPRSS4-206ENST00000519126 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
TMPRSS4-206ENST00000519126 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
TMPRSS4-206ENST00000519126 CECR2Q9BXF3 1484 aa24.66■■□□□ 1.54
TMPRSS4-206ENST00000519126 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.53
TMPRSS4-206ENST00000519126 DNAJC5Q9H3Z4 198 aa24.58■■□□□ 1.53
TMPRSS4-206ENST00000519126 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
TMPRSS4-206ENST00000519126 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
TMPRSS4-206ENST00000519126 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
TMPRSS4-206ENST00000519126 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
TMPRSS4-206ENST00000519126 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
TMPRSS4-206ENST00000519126 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
TMPRSS4-206ENST00000519126 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
TMPRSS4-206ENST00000519126 CUX2O14529 1486 aa23.8■■□□□ 1.4
TMPRSS4-206ENST00000519126 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
TMPRSS4-206ENST00000519126 NCAPD3P42695 1498 aa23.4■■□□□ 1.34
TMPRSS4-206ENST00000519126 NESP48681 1621 aa23.26■■□□□ 1.31
TMPRSS4-206ENST00000519126 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
TMPRSS4-206ENST00000519126 ATAD2BQ9ULI0 1458 aa23.24■■□□□ 1.31
TMPRSS4-206ENST00000519126 THOC2Q8NI27 1593 aaKnown RBP23.15■■□□□ 1.3
TMPRSS4-206ENST00000519126 HMGXB3Q12766 1538 aa23.15■■□□□ 1.3
TMPRSS4-206ENST00000519126 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
TMPRSS4-206ENST00000519126 FOXD1Q16676 465 aa23.13■■□□□ 1.29
TMPRSS4-206ENST00000519126 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
TMPRSS4-206ENST00000519126 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
TMPRSS4-206ENST00000519126 BAZ1BQ9UIG0 1483 aaKnown RBP22.98■■□□□ 1.27
TMPRSS4-206ENST00000519126 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
TMPRSS4-206ENST00000519126 POTEDQ86YR6 584 aa22.91■■□□□ 1.26
TMPRSS4-206ENST00000519126 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
TMPRSS4-206ENST00000519126 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
TMPRSS4-206ENST00000519126 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
TMPRSS4-206ENST00000519126 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
TMPRSS4-206ENST00000519126 WDR62O43379 1518 aa22.68■■□□□ 1.22
TMPRSS4-206ENST00000519126 CADPSQ9ULU8 1353 aa22.66■■□□□ 1.22
TMPRSS4-206ENST00000519126 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
TMPRSS4-206ENST00000519126 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
TMPRSS4-206ENST00000519126 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
TMPRSS4-206ENST00000519126 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
TMPRSS4-206ENST00000519126 RIMBP3CA6NJZ7 1639 aa22.4■■□□□ 1.18
TMPRSS4-206ENST00000519126 RIMBP3BA6NNM3 1639 aa22.4■■□□□ 1.18
TMPRSS4-206ENST00000519126 RIMBP3Q9UFD9 1639 aa22.4■■□□□ 1.18
TMPRSS4-206ENST00000519126 WIZO95785 1651 aa22.33■■□□□ 1.17
TMPRSS4-206ENST00000519126 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
TMPRSS4-206ENST00000519126 CFTRP13569 1480 aa22.25■■□□□ 1.15
TMPRSS4-206ENST00000519126 ARHGEF11O15085 1522 aa22.25■■□□□ 1.15
TMPRSS4-206ENST00000519126 CYB5RLQ6IPT4 315 aa22.16■■□□□ 1.14
TMPRSS4-206ENST00000519126 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
TMPRSS4-206ENST00000519126 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
TMPRSS4-206ENST00000519126 IFT140Q96RY7 1462 aa22.07■■□□□ 1.12
TMPRSS4-206ENST00000519126 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
TMPRSS4-206ENST00000519126 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
TMPRSS4-206ENST00000519126 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
TMPRSS4-206ENST00000519126 CHD1O14646 1710 aa21.95■■□□□ 1.1
TMPRSS4-206ENST00000519126 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.1
TMPRSS4-206ENST00000519126 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
TMPRSS4-206ENST00000519126 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
TMPRSS4-206ENST00000519126 FBLN2P98095 1184 aa21.85■■□□□ 1.09
TMPRSS4-206ENST00000519126 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.09
TMPRSS4-206ENST00000519126 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
TMPRSS4-206ENST00000519126 TARBP1Q13395 1621 aaKnown RBP21.77■■□□□ 1.08
TMPRSS4-206ENST00000519126 MSH5O43196 834 aa21.77■■□□□ 1.08
TMPRSS4-206ENST00000519126 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
TMPRSS4-206ENST00000519126 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
TMPRSS4-206ENST00000519126 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
TMPRSS4-206ENST00000519126 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
TMPRSS4-206ENST00000519126 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
TMPRSS4-206ENST00000519126 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
TMPRSS4-206ENST00000519126 SYNJ1O43426 1573 aa21.58■■□□□ 1.05
TMPRSS4-206ENST00000519126 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.04
TMPRSS4-206ENST00000519126 CHMP7Q8WUX9 453 aaPredicted RBP21.57■■□□□ 1.04
TMPRSS4-206ENST00000519126 SOGA1O94964 1423 aa21.55■■□□□ 1.04
TMPRSS4-206ENST00000519126 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
TMPRSS4-206ENST00000519126 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
TMPRSS4-206ENST00000519126 GAPVD1Q14C86 1478 aa21.47■■□□□ 1.03
TMPRSS4-206ENST00000519126 SYNJ2O15056 1496 aa21.43■■□□□ 1.02
TMPRSS4-206ENST00000519126 GRIN2BQ13224 1484 aa21.42■■□□□ 1.02
TMPRSS4-206ENST00000519126 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
TMPRSS4-206ENST00000519126 PBRM1Q86U86 1689 aa21.32■■□□□ 1
TMPRSS4-206ENST00000519126 PIAS4Q8N2W9 510 aaPredicted RBP21.31■■□□□ 1
TMPRSS4-206ENST00000519126 CUX1P39880 1505 aa21.29■■□□□ 1
TMPRSS4-206ENST00000519126 ERCC6L2Q5T890 1561 aa21.27■■□□□ 1
TMPRSS4-206ENST00000519126 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
TMPRSS4-206ENST00000519126 CEP170Q5SW79 1584 aa21.18■□□□□ 0.98
TMPRSS4-206ENST00000519126 ABCA5Q8WWZ7 1642 aa21.15■□□□□ 0.98
TMPRSS4-206ENST00000519126 GRIN2AQ12879 1464 aa21.14■□□□□ 0.98
TMPRSS4-206ENST00000519126 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
TMPRSS4-206ENST00000519126 ILDR1Q86SU0 546 aaPredicted RBP21.11■□□□□ 0.97
TMPRSS4-206ENST00000519126 NUP160Q12769 1436 aa21.09■□□□□ 0.97
TMPRSS4-206ENST00000519126 SHROOM2Q13796 1616 aa21.08■□□□□ 0.97
TMPRSS4-206ENST00000519126 PPP6R1Q9UPN7 881 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms