RNA–Protein interactions for RNA: ENST00000518680.1

MCM4-205, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 5

Gene MCM4, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-205ENST00000518680 NISCHQ9Y2I1 1504 aa28.97■■■□□ 2.23
MCM4-205ENST00000518680 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
MCM4-205ENST00000518680 ABCC9O60706 1549 aa25.61■■□□□ 1.69
MCM4-205ENST00000518680 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
MCM4-205ENST00000518680 NACADO15069 1562 aa24.42■■□□□ 1.5
MCM4-205ENST00000518680 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
MCM4-205ENST00000518680 MYO15BQ96JP2 1530 aa24.17■■□□□ 1.46
MCM4-205ENST00000518680 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
MCM4-205ENST00000518680 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
MCM4-205ENST00000518680 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
MCM4-205ENST00000518680 PABPN1Q86U42 306 aaKnown RBP eCLIP23.86■■□□□ 1.41
MCM4-205ENST00000518680 BICRAQ9NZM4 1560 aa23.77■■□□□ 1.4
MCM4-205ENST00000518680 DNAJC5BQ9UF47 199 aa23.72■■□□□ 1.39
MCM4-205ENST00000518680 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
MCM4-205ENST00000518680 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
MCM4-205ENST00000518680 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
MCM4-205ENST00000518680 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
MCM4-205ENST00000518680 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
MCM4-205ENST00000518680 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
MCM4-205ENST00000518680 SMARCA4P51532 1647 aa22.56■■□□□ 1.2
MCM4-205ENST00000518680 NCAPD3P42695 1498 aa22.52■■□□□ 1.2
MCM4-205ENST00000518680 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
MCM4-205ENST00000518680 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
MCM4-205ENST00000518680 SMARCA2P51531 1590 aa22.48■■□□□ 1.19
MCM4-205ENST00000518680 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
MCM4-205ENST00000518680 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
MCM4-205ENST00000518680 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.16
MCM4-205ENST00000518680 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
MCM4-205ENST00000518680 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
MCM4-205ENST00000518680 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
MCM4-205ENST00000518680 WIZO95785 1651 aa22.07■■□□□ 1.12
MCM4-205ENST00000518680 NESP48681 1621 aa22.06■■□□□ 1.12
MCM4-205ENST00000518680 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
MCM4-205ENST00000518680 CUX2O14529 1486 aa21.98■■□□□ 1.11
MCM4-205ENST00000518680 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
MCM4-205ENST00000518680 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
MCM4-205ENST00000518680 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
MCM4-205ENST00000518680 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.09
MCM4-205ENST00000518680 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
MCM4-205ENST00000518680 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
MCM4-205ENST00000518680 CFTRP13569 1480 aa21.65■■□□□ 1.06
MCM4-205ENST00000518680 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.06
MCM4-205ENST00000518680 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
MCM4-205ENST00000518680 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
MCM4-205ENST00000518680 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
MCM4-205ENST00000518680 WDR62O43379 1518 aa21.58■■□□□ 1.04
MCM4-205ENST00000518680 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
MCM4-205ENST00000518680 PRDM2Q13029 1718 aa21.53■■□□□ 1.04
MCM4-205ENST00000518680 URB2Q14146 1524 aaKnown RBP21.4■■□□□ 1.02
MCM4-205ENST00000518680 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
MCM4-205ENST00000518680 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
MCM4-205ENST00000518680 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
MCM4-205ENST00000518680 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
MCM4-205ENST00000518680 IFT140Q96RY7 1462 aa21.18■□□□□ 0.98
MCM4-205ENST00000518680 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
MCM4-205ENST00000518680 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
MCM4-205ENST00000518680 TARBP1Q13395 1621 aaKnown RBP21.02■□□□□ 0.96
MCM4-205ENST00000518680 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.95
MCM4-205ENST00000518680 OSCARQ8IYS5 282 aa21.01■□□□□ 0.95
MCM4-205ENST00000518680 CUX1P39880 1505 aa20.96■□□□□ 0.95
MCM4-205ENST00000518680 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
MCM4-205ENST00000518680 SOGA1O94964 1423 aa20.94■□□□□ 0.94
MCM4-205ENST00000518680 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.941e-9■■□□□ 11.8
MCM4-205ENST00000518680 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
MCM4-205ENST00000518680 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
MCM4-205ENST00000518680 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
MCM4-205ENST00000518680 CHD1O14646 1710 aa20.82■□□□□ 0.92
MCM4-205ENST00000518680 TRIM41Q8WV44 630 aa20.8■□□□□ 0.92
MCM4-205ENST00000518680 FBLN2P98095 1184 aa20.76■□□□□ 0.91
MCM4-205ENST00000518680 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
MCM4-205ENST00000518680 GRIN2BQ13224 1484 aa20.74■□□□□ 0.91
MCM4-205ENST00000518680 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
MCM4-205ENST00000518680 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
MCM4-205ENST00000518680 BIVM-ERCC5R4GMW8 1640 aa20.72■□□□□ 0.91
MCM4-205ENST00000518680 MAGI1Q96QZ7 1491 aaPredicted RBP20.72■□□□□ 0.91
MCM4-205ENST00000518680 RIMBP3CA6NJZ7 1639 aa20.71■□□□□ 0.91
MCM4-205ENST00000518680 RIMBP3BA6NNM3 1639 aa20.71■□□□□ 0.91
MCM4-205ENST00000518680 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
MCM4-205ENST00000518680 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
MCM4-205ENST00000518680 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
MCM4-205ENST00000518680 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
MCM4-205ENST00000518680 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
MCM4-205ENST00000518680 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
MCM4-205ENST00000518680 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
MCM4-205ENST00000518680 CHMP7Q8WUX9 453 aaPredicted RBP20.66■□□□□ 0.9
MCM4-205ENST00000518680 SYNJ2O15056 1496 aa20.63■□□□□ 0.89
MCM4-205ENST00000518680 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
MCM4-205ENST00000518680 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
MCM4-205ENST00000518680 CYB5RLQ6IPT4 315 aa20.49■□□□□ 0.87
MCM4-205ENST00000518680 ARAP1Q96P48 1450 aa20.49■□□□□ 0.87
MCM4-205ENST00000518680 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
MCM4-205ENST00000518680 GRIN2AQ12879 1464 aa20.47■□□□□ 0.87
MCM4-205ENST00000518680 FHAD1B1AJZ9 1412 aa20.45■□□□□ 0.86
MCM4-205ENST00000518680 NUP160Q12769 1436 aa20.38■□□□□ 0.85
MCM4-205ENST00000518680 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
MCM4-205ENST00000518680 KIF27Q86VH2 1401 aa20.33■□□□□ 0.84
MCM4-205ENST00000518680 SHROOM2Q13796 1616 aa20.27■□□□□ 0.83
MCM4-205ENST00000518680 CUL7Q14999 1698 aa20.26■□□□□ 0.83
MCM4-205ENST00000518680 IGF1RP08069 1367 aa20.25■□□□□ 0.83
MCM4-205ENST00000518680 ERCC6L2Q5T890 1561 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms