RNA–Protein interactions for RNA: ENST00000518557.5

LINC00599-202, long intergenic non-protein coding RNA 599, humanhuman

TSL 1 (best)

Gene LINC00599, Length 869 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00599-202ENST00000518557 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
LINC00599-202ENST00000518557 AEBP2Q6ZN18 517 aaPredicted RBP23.66■■□□□ 1.38
LINC00599-202ENST00000518557 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
LINC00599-202ENST00000518557 CCDC180Q9P1Z9 1646 aa21.42■■□□□ 1.02
LINC00599-202ENST00000518557 ABCC9O60706 1549 aa21.21■□□□□ 0.99
LINC00599-202ENST00000518557 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
LINC00599-202ENST00000518557 NACADO15069 1562 aa20.25■□□□□ 0.83
LINC00599-202ENST00000518557 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
LINC00599-202ENST00000518557 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
LINC00599-202ENST00000518557 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
LINC00599-202ENST00000518557 ZCCHC6Q5VYS8 1495 aaKnown RBP19.94■□□□□ 0.78
LINC00599-202ENST00000518557 PHF23Q9BUL5 403 aaPredicted RBP19.9■□□□□ 0.78
LINC00599-202ENST00000518557 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
LINC00599-202ENST00000518557 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
LINC00599-202ENST00000518557 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.76
LINC00599-202ENST00000518557 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
LINC00599-202ENST00000518557 BICRAQ9NZM4 1560 aa19.76■□□□□ 0.75
LINC00599-202ENST00000518557 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
LINC00599-202ENST00000518557 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
LINC00599-202ENST00000518557 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
LINC00599-202ENST00000518557 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
LINC00599-202ENST00000518557 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
LINC00599-202ENST00000518557 FOXD1Q16676 465 aa18.85■□□□□ 0.61
LINC00599-202ENST00000518557 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
LINC00599-202ENST00000518557 ATAD2BQ9ULI0 1458 aa18.66■□□□□ 0.58
LINC00599-202ENST00000518557 SMARCA4P51532 1647 aa18.63■□□□□ 0.57
LINC00599-202ENST00000518557 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
LINC00599-202ENST00000518557 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
LINC00599-202ENST00000518557 HMGXB3Q12766 1538 aa18.58■□□□□ 0.56
LINC00599-202ENST00000518557 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
LINC00599-202ENST00000518557 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
LINC00599-202ENST00000518557 BAZ1BQ9UIG0 1483 aaKnown RBP18.43■□□□□ 0.54
LINC00599-202ENST00000518557 CUX2O14529 1486 aa18.3■□□□□ 0.52
LINC00599-202ENST00000518557 NESP48681 1621 aa18.29■□□□□ 0.52
LINC00599-202ENST00000518557 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
LINC00599-202ENST00000518557 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
LINC00599-202ENST00000518557 WIZO95785 1651 aa18.18■□□□□ 0.5
LINC00599-202ENST00000518557 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
LINC00599-202ENST00000518557 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
LINC00599-202ENST00000518557 THOC2Q8NI27 1593 aaKnown RBP18.11■□□□□ 0.49
LINC00599-202ENST00000518557 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
LINC00599-202ENST00000518557 DNAJC5Q9H3Z4 198 aa18.1■□□□□ 0.49
LINC00599-202ENST00000518557 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
LINC00599-202ENST00000518557 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
LINC00599-202ENST00000518557 CFTRP13569 1480 aa17.99■□□□□ 0.47
LINC00599-202ENST00000518557 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
LINC00599-202ENST00000518557 WDR62O43379 1518 aa17.93■□□□□ 0.46
LINC00599-202ENST00000518557 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
LINC00599-202ENST00000518557 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
LINC00599-202ENST00000518557 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.44
LINC00599-202ENST00000518557 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
LINC00599-202ENST00000518557 URB2Q14146 1524 aaKnown RBP17.75■□□□□ 0.43
LINC00599-202ENST00000518557 MSH5O43196 834 aa17.73■□□□□ 0.43
LINC00599-202ENST00000518557 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
LINC00599-202ENST00000518557 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
LINC00599-202ENST00000518557 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
LINC00599-202ENST00000518557 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
LINC00599-202ENST00000518557 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
LINC00599-202ENST00000518557 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
LINC00599-202ENST00000518557 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
LINC00599-202ENST00000518557 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
LINC00599-202ENST00000518557 PPP6R1Q9UPN7 881 aa17.47■□□□□ 0.39
LINC00599-202ENST00000518557 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
LINC00599-202ENST00000518557 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
LINC00599-202ENST00000518557 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
LINC00599-202ENST00000518557 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
LINC00599-202ENST00000518557 ADRA2BP18089 450 aa17.35■□□□□ 0.37
LINC00599-202ENST00000518557 CUX1P39880 1505 aa17.33■□□□□ 0.37
LINC00599-202ENST00000518557 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.37
LINC00599-202ENST00000518557 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
LINC00599-202ENST00000518557 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
LINC00599-202ENST00000518557 SOGA1O94964 1423 aa17.3■□□□□ 0.36
LINC00599-202ENST00000518557 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
LINC00599-202ENST00000518557 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
LINC00599-202ENST00000518557 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
LINC00599-202ENST00000518557 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
LINC00599-202ENST00000518557 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
LINC00599-202ENST00000518557 RIMBP3CA6NJZ7 1639 aa17.17■□□□□ 0.34
LINC00599-202ENST00000518557 RIMBP3BA6NNM3 1639 aa17.17■□□□□ 0.34
LINC00599-202ENST00000518557 RIMBP3Q9UFD9 1639 aa17.17■□□□□ 0.34
LINC00599-202ENST00000518557 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
LINC00599-202ENST00000518557 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
LINC00599-202ENST00000518557 GRIN2BQ13224 1484 aa17.16■□□□□ 0.34
LINC00599-202ENST00000518557 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
LINC00599-202ENST00000518557 CHD1O14646 1710 aa17.15■□□□□ 0.34
LINC00599-202ENST00000518557 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
LINC00599-202ENST00000518557 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
LINC00599-202ENST00000518557 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
LINC00599-202ENST00000518557 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
LINC00599-202ENST00000518557 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
LINC00599-202ENST00000518557 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
LINC00599-202ENST00000518557 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
LINC00599-202ENST00000518557 FBLN2P98095 1184 aa17.07■□□□□ 0.32
LINC00599-202ENST00000518557 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
LINC00599-202ENST00000518557 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
LINC00599-202ENST00000518557 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
LINC00599-202ENST00000518557 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
LINC00599-202ENST00000518557 CYB5RLQ6IPT4 315 aa16.97■□□□□ 0.31
LINC00599-202ENST00000518557 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
LINC00599-202ENST00000518557 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms