RNA–Protein interactions for RNA: ENST00000518429.2

TSPAN18-203, Transcript of tetraspanin 18, humanhuman

TSL 1 (best)

Gene TSPAN18, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-203ENST00000518429 NISCHQ9Y2I1 1504 aa48.16■■■■■ 5.3
TSPAN18-203ENST00000518429 CCDC180Q9P1Z9 1646 aa42.75■■■■■ 4.43
TSPAN18-203ENST00000518429 ABCC9O60706 1549 aa41.7■■■■■ 4.27
TSPAN18-203ENST00000518429 NACADO15069 1562 aa40.15■■■■■ 4.02
TSPAN18-203ENST00000518429 ZCCHC6Q5VYS8 1495 aaKnown RBP40.15■■■■■ 4.02
TSPAN18-203ENST00000518429 RB1CC1Q8TDY2 1594 aa40.14■■■■■ 4.02
TSPAN18-203ENST00000518429 MYO15BQ96JP2 1530 aa40.01■■■■■ 4
TSPAN18-203ENST00000518429 DCAF8L2P0C7V8 631 aa39.97■■■■□ 3.99
TSPAN18-203ENST00000518429 DCAF1Q9Y4B6 1507 aa39.87■■■■□ 3.97
TSPAN18-203ENST00000518429 UNC13AQ9UPW8 1703 aa39.36■■■■□ 3.89
TSPAN18-203ENST00000518429 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
TSPAN18-203ENST00000518429 SCRIBQ14160 1630 aa38.98■■■■□ 3.83
TSPAN18-203ENST00000518429 PABPN1Q86U42 306 aaKnown RBP eCLIP38.97■■■■□ 3.83
TSPAN18-203ENST00000518429 SHROOM4Q9ULL8 1493 aa38.56■■■■□ 3.76
TSPAN18-203ENST00000518429 DNAJC5BQ9UF47 199 aa38.32■■■■□ 3.72
TSPAN18-203ENST00000518429 EIF4G1Q04637 1599 aaKnown RBP37.95■■■■□ 3.67
TSPAN18-203ENST00000518429 CC2D2AQ9P2K1 1620 aa37.77■■■■□ 3.64
TSPAN18-203ENST00000518429 CECR2Q9BXF3 1484 aa37.54■■■■□ 3.6
TSPAN18-203ENST00000518429 SMARCA4P51532 1647 aa37.34■■■■□ 3.57
TSPAN18-203ENST00000518429 BAZ1AQ9NRL2 1556 aaPredicted RBP37.26■■■■□ 3.56
TSPAN18-203ENST00000518429 MROH2BQ7Z745 1585 aa37.13■■■■□ 3.53
TSPAN18-203ENST00000518429 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.53
TSPAN18-203ENST00000518429 NCAPD3P42695 1498 aa37.09■■■■□ 3.53
TSPAN18-203ENST00000518429 PEG3Q9GZU2 1588 aa37.03■■■■□ 3.52
TSPAN18-203ENST00000518429 SMARCA2P51531 1590 aa37.01■■■■□ 3.52
TSPAN18-203ENST00000518429 HMGXB3Q12766 1538 aa36.9■■■■□ 3.5
TSPAN18-203ENST00000518429 BAZ1BQ9UIG0 1483 aaKnown RBP36.74■■■■□ 3.47
TSPAN18-203ENST00000518429 RSF1Q96T23 1441 aaPredicted RBP36.73■■■■□ 3.47
TSPAN18-203ENST00000518429 WIZO95785 1651 aa36.72■■■■□ 3.47
TSPAN18-203ENST00000518429 TOP2AP11388 1531 aaKnown RBP36.31■■■■□ 3.4
TSPAN18-203ENST00000518429 NESP48681 1621 aa36.17■■■■□ 3.38
TSPAN18-203ENST00000518429 LAMC3Q9Y6N6 1575 aa36.05■■■■□ 3.36
TSPAN18-203ENST00000518429 CADPSQ9ULU8 1353 aa35.97■■■■□ 3.35
TSPAN18-203ENST00000518429 CCDC88BA6NC98 1476 aa35.91■■■■□ 3.34
TSPAN18-203ENST00000518429 ERCC6Q03468 1493 aa35.83■■■■□ 3.33
TSPAN18-203ENST00000518429 CFTRP13569 1480 aa35.82■■■■□ 3.32
TSPAN18-203ENST00000518429 PDS5BQ9NTI5 1447 aa35.74■■■■□ 3.31
TSPAN18-203ENST00000518429 KIF21AQ7Z4S6 1674 aa35.74■■■■□ 3.31
TSPAN18-203ENST00000518429 SUPT5HO00267 1087 aaKnown RBP35.69■■■■□ 3.3
TSPAN18-203ENST00000518429 THOC2Q8NI27 1593 aaKnown RBP35.63■■■■□ 3.29
TSPAN18-203ENST00000518429 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
TSPAN18-203ENST00000518429 PRDM2Q13029 1718 aa35.54■■■■□ 3.28
TSPAN18-203ENST00000518429 CUX2O14529 1486 aa35.52■■■■□ 3.28
TSPAN18-203ENST00000518429 CEP164Q9UPV0 1460 aa35.46■■■■□ 3.27
TSPAN18-203ENST00000518429 MRC2Q9UBG0 1479 aa35.42■■■■□ 3.26
TSPAN18-203ENST00000518429 WDR62O43379 1518 aa35.36■■■■□ 3.25
TSPAN18-203ENST00000518429 URB2Q14146 1524 aaKnown RBP35.25■■■■□ 3.23
TSPAN18-203ENST00000518429 TOPBP1Q92547 1522 aa35.02■■■■□ 3.2
TSPAN18-203ENST00000518429 DNMBPQ6XZF7 1577 aa34.97■■■■□ 3.19
TSPAN18-203ENST00000518429 ABCC8Q09428 1581 aa34.95■■■■□ 3.18
TSPAN18-203ENST00000518429 CUX1P39880 1505 aa34.82■■■■□ 3.16
TSPAN18-203ENST00000518429 IFT140Q96RY7 1462 aa34.74■■■■□ 3.15
TSPAN18-203ENST00000518429 POLA1P09884 1462 aaPredicted RBP34.73■■■■□ 3.15
TSPAN18-203ENST00000518429 TARBP1Q13395 1621 aaKnown RBP34.69■■■■□ 3.14
TSPAN18-203ENST00000518429 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
TSPAN18-203ENST00000518429 ZNF608Q9ULD9 1512 aaPredicted RBP34.64■■■■□ 3.14
TSPAN18-203ENST00000518429 RAD54L2Q9Y4B4 1467 aa34.58■■■■□ 3.13
TSPAN18-203ENST00000518429 WRNQ14191 1432 aaPredicted RBP eCLIP34.55■■■■□ 3.12
TSPAN18-203ENST00000518429 SYNJ1O43426 1573 aa34.54■■■■□ 3.12
TSPAN18-203ENST00000518429 BIVM-ERCC5R4GMW8 1640 aa34.54■■■■□ 3.12
TSPAN18-203ENST00000518429 SOGA1O94964 1423 aa34.54■■■■□ 3.12
TSPAN18-203ENST00000518429 TOP2BQ02880 1626 aa34.52■■■■□ 3.12
TSPAN18-203ENST00000518429 EIF4G3O43432 1585 aaKnown RBP34.48■■■■□ 3.11
TSPAN18-203ENST00000518429 WDR97A6NE52 1622 aa34.42■■■■□ 3.1
TSPAN18-203ENST00000518429 AQRO60306 1485 aaKnown RBP eCLIP34.42■■■■□ 3.1
TSPAN18-203ENST00000518429 DNAJC5Q9H3Z4 198 aa34.35■■■■□ 3.09
TSPAN18-203ENST00000518429 TDRD9Q8NDG6 1382 aaKnown RBP34.35■■■■□ 3.09
TSPAN18-203ENST00000518429 ABCA10Q8WWZ4 1543 aa34.34■■■■□ 3.09
TSPAN18-203ENST00000518429 ABCA5Q8WWZ7 1642 aa34.22■■■■□ 3.07
TSPAN18-203ENST00000518429 GAPVD1Q14C86 1478 aa34.14■■■■□ 3.06
TSPAN18-203ENST00000518429 GRIN2BQ13224 1484 aa34.13■■■■□ 3.05
TSPAN18-203ENST00000518429 PBRM1Q86U86 1689 aa34.09■■■■□ 3.05
TSPAN18-203ENST00000518429 SNAPC4Q5SXM2 1469 aa34.08■■■■□ 3.05
TSPAN18-203ENST00000518429 MAGI1Q96QZ7 1491 aaPredicted RBP34.03■■■■□ 3.04
TSPAN18-203ENST00000518429 CHD1O14646 1710 aa34.02■■■■□ 3.04
TSPAN18-203ENST00000518429 OSCARQ8IYS5 282 aa34■■■■□ 3.03
TSPAN18-203ENST00000518429 ERICH3Q5RHP9 1530 aa33.9■■■■□ 3.02
TSPAN18-203ENST00000518429 SYNJ2O15056 1496 aa33.9■■■■□ 3.02
TSPAN18-203ENST00000518429 ADAMTS12P58397 1594 aa33.85■■■■□ 3.01
TSPAN18-203ENST00000518429 FBLN2P98095 1184 aa33.82■■■■□ 3
TSPAN18-203ENST00000518429 KIF27Q86VH2 1401 aa33.79■■■■□ 3
TSPAN18-203ENST00000518429 CHMP7Q8WUX9 453 aaPredicted RBP33.78■■■■□ 3
TSPAN18-203ENST00000518429 FHAD1B1AJZ9 1412 aa33.76■■■□□ 2.99
TSPAN18-203ENST00000518429 IGF1RP08069 1367 aa33.74■■■□□ 2.99
TSPAN18-203ENST00000518429 GRIN2AQ12879 1464 aa33.72■■■□□ 2.99
TSPAN18-203ENST00000518429 CLASP1Q7Z460 1538 aa33.71■■■□□ 2.99
TSPAN18-203ENST00000518429 TRIM41Q8WV44 630 aa33.7■■■□□ 2.99
TSPAN18-203ENST00000518429 RUSC2Q8N2Y8 1516 aa33.64■■■□□ 2.98
TSPAN18-203ENST00000518429 NUP160Q12769 1436 aa33.61■■■□□ 2.97
TSPAN18-203ENST00000518429 CEP170Q5SW79 1584 aa33.59■■■□□ 2.97
TSPAN18-203ENST00000518429 CUL7Q14999 1698 aa33.58■■■□□ 2.97
TSPAN18-203ENST00000518429 RIMBP3CA6NJZ7 1639 aa33.55■■■□□ 2.96
TSPAN18-203ENST00000518429 RIMBP3BA6NNM3 1639 aa33.55■■■□□ 2.96
TSPAN18-203ENST00000518429 RIMBP3Q9UFD9 1639 aa33.55■■■□□ 2.96
TSPAN18-203ENST00000518429 ARHGEF11O15085 1522 aa33.54■■■□□ 2.96
TSPAN18-203ENST00000518429 CHIC1Q5VXU3 224 aa33.48■■■□□ 2.95
TSPAN18-203ENST00000518429 CARMIL1Q5VZK9 1371 aa33.47■■■□□ 2.95
TSPAN18-203ENST00000518429 SHROOM2Q13796 1616 aa33.36■■■□□ 2.93
TSPAN18-203ENST00000518429 ARAP1Q96P48 1450 aa33.31■■■□□ 2.92
TSPAN18-203ENST00000518429 RAPGEF2Q9Y4G8 1499 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms