RNA–Protein interactions for RNA: ENST00000518423.1

IGKV2D-38-201, Transcript of immunoglobulin kappa variable 2D-38 (pseudogene), humanhuman

BASIC

Gene IGKV2D-38, Length 240 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-38-201ENST00000518423 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
IGKV2D-38-201ENST00000518423 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
IGKV2D-38-201ENST00000518423 ABCC9O60706 1549 aa14.54□□□□□ -0.08
IGKV2D-38-201ENST00000518423 AEBP2Q6ZN18 517 aaPredicted RBP14.45□□□□□ -0.1
IGKV2D-38-201ENST00000518423 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
IGKV2D-38-201ENST00000518423 CHIC1Q5VXU3 224 aa13.99□□□□□ -0.17
IGKV2D-38-201ENST00000518423 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
IGKV2D-38-201ENST00000518423 NACADO15069 1562 aa13.79□□□□□ -0.2
IGKV2D-38-201ENST00000518423 ZCCHC6Q5VYS8 1495 aaKnown RBP13.72□□□□□ -0.21
IGKV2D-38-201ENST00000518423 UNC13AQ9UPW8 1703 aa13.62□□□□□ -0.23
IGKV2D-38-201ENST00000518423 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
IGKV2D-38-201ENST00000518423 SCRIBQ14160 1630 aa13.57□□□□□ -0.24
IGKV2D-38-201ENST00000518423 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
IGKV2D-38-201ENST00000518423 DCAF1Q9Y4B6 1507 aa13.53□□□□□ -0.24
IGKV2D-38-201ENST00000518423 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
IGKV2D-38-201ENST00000518423 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
IGKV2D-38-201ENST00000518423 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
IGKV2D-38-201ENST00000518423 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
IGKV2D-38-201ENST00000518423 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
IGKV2D-38-201ENST00000518423 CECR2Q9BXF3 1484 aa13.01□□□□□ -0.33
IGKV2D-38-201ENST00000518423 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
IGKV2D-38-201ENST00000518423 BAZ1AQ9NRL2 1556 aaPredicted RBP12.81□□□□□ -0.36
IGKV2D-38-201ENST00000518423 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
IGKV2D-38-201ENST00000518423 MROH2BQ7Z745 1585 aa12.74□□□□□ -0.37
IGKV2D-38-201ENST00000518423 ATAD2BQ9ULI0 1458 aa12.73□□□□□ -0.37
IGKV2D-38-201ENST00000518423 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
IGKV2D-38-201ENST00000518423 WIZO95785 1651 aa12.67□□□□□ -0.38
IGKV2D-38-201ENST00000518423 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
IGKV2D-38-201ENST00000518423 NCAPD3P42695 1498 aa12.66□□□□□ -0.38
IGKV2D-38-201ENST00000518423 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
IGKV2D-38-201ENST00000518423 ERCC6Q03468 1493 aa12.58□□□□□ -0.4
IGKV2D-38-201ENST00000518423 NESP48681 1621 aa12.54□□□□□ -0.4
IGKV2D-38-201ENST00000518423 RSF1Q96T23 1441 aaPredicted RBP12.53□□□□□ -0.4
IGKV2D-38-201ENST00000518423 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
IGKV2D-38-201ENST00000518423 KIF21AQ7Z4S6 1674 aa12.44□□□□□ -0.42
IGKV2D-38-201ENST00000518423 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
IGKV2D-38-201ENST00000518423 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
IGKV2D-38-201ENST00000518423 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
IGKV2D-38-201ENST00000518423 CADPSQ9ULU8 1353 aa12.34□□□□□ -0.43
IGKV2D-38-201ENST00000518423 THOC2Q8NI27 1593 aaKnown RBP12.33□□□□□ -0.44
IGKV2D-38-201ENST00000518423 CCDC88BA6NC98 1476 aa12.31□□□□□ -0.44
IGKV2D-38-201ENST00000518423 CUX2O14529 1486 aa12.3□□□□□ -0.44
IGKV2D-38-201ENST00000518423 CEP164Q9UPV0 1460 aa12.3□□□□□ -0.44
IGKV2D-38-201ENST00000518423 PRDM2Q13029 1718 aa12.29□□□□□ -0.44
IGKV2D-38-201ENST00000518423 PHF23Q9BUL5 403 aaPredicted RBP12.29□□□□□ -0.44
IGKV2D-38-201ENST00000518423 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
IGKV2D-38-201ENST00000518423 SENP3Q9H4L4 574 aaPredicted RBP12.27□□□□□ -0.45
IGKV2D-38-201ENST00000518423 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
IGKV2D-38-201ENST00000518423 CFTRP13569 1480 aa12.24□□□□□ -0.45
IGKV2D-38-201ENST00000518423 WDR62O43379 1518 aa12.18□□□□□ -0.46
IGKV2D-38-201ENST00000518423 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
IGKV2D-38-201ENST00000518423 TOPBP1Q92547 1522 aa12.07□□□□□ -0.48
IGKV2D-38-201ENST00000518423 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
IGKV2D-38-201ENST00000518423 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
IGKV2D-38-201ENST00000518423 IFT140Q96RY7 1462 aa11.98□□□□□ -0.49
IGKV2D-38-201ENST00000518423 EIF4G3O43432 1585 aaKnown RBP11.97□□□□□ -0.49
IGKV2D-38-201ENST00000518423 ZNF608Q9ULD9 1512 aaPredicted RBP11.97□□□□□ -0.49
IGKV2D-38-201ENST00000518423 CUX1P39880 1505 aa11.96□□□□□ -0.49
IGKV2D-38-201ENST00000518423 FGD5Q6ZNL6 1462 aa11.96□□□□□ -0.49
IGKV2D-38-201ENST00000518423 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
IGKV2D-38-201ENST00000518423 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
IGKV2D-38-201ENST00000518423 DNAJC5Q9H3Z4 198 aa11.92□□□□□ -0.5
IGKV2D-38-201ENST00000518423 SOGA1O94964 1423 aa11.92□□□□□ -0.5
IGKV2D-38-201ENST00000518423 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
IGKV2D-38-201ENST00000518423 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.5
IGKV2D-38-201ENST00000518423 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
IGKV2D-38-201ENST00000518423 FBLN2P98095 1184 aa11.89□□□□□ -0.51
IGKV2D-38-201ENST00000518423 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
IGKV2D-38-201ENST00000518423 TDRD9Q8NDG6 1382 aaKnown RBP11.88□□□□□ -0.51
IGKV2D-38-201ENST00000518423 CHD1O14646 1710 aa11.87□□□□□ -0.51
IGKV2D-38-201ENST00000518423 PBRM1Q86U86 1689 aa11.86□□□□□ -0.51
IGKV2D-38-201ENST00000518423 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
IGKV2D-38-201ENST00000518423 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
IGKV2D-38-201ENST00000518423 TOP2BQ02880 1626 aa11.84□□□□□ -0.51
IGKV2D-38-201ENST00000518423 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
IGKV2D-38-201ENST00000518423 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
IGKV2D-38-201ENST00000518423 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
IGKV2D-38-201ENST00000518423 GRIN2BQ13224 1484 aa11.77□□□□□ -0.52
IGKV2D-38-201ENST00000518423 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
IGKV2D-38-201ENST00000518423 ABCA5Q8WWZ7 1642 aa11.77□□□□□ -0.53
IGKV2D-38-201ENST00000518423 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
IGKV2D-38-201ENST00000518423 CHMP7Q8WUX9 453 aaPredicted RBP11.75□□□□□ -0.53
IGKV2D-38-201ENST00000518423 MAGI1Q96QZ7 1491 aaPredicted RBP11.73□□□□□ -0.53
IGKV2D-38-201ENST00000518423 ADAMTS12P58397 1594 aa11.71□□□□□ -0.54
IGKV2D-38-201ENST00000518423 RIMBP3CA6NJZ7 1639 aa11.7□□□□□ -0.54
IGKV2D-38-201ENST00000518423 RIMBP3BA6NNM3 1639 aa11.7□□□□□ -0.54
IGKV2D-38-201ENST00000518423 RIMBP3Q9UFD9 1639 aa11.7□□□□□ -0.54
IGKV2D-38-201ENST00000518423 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
IGKV2D-38-201ENST00000518423 ARHGEF11O15085 1522 aa11.65□□□□□ -0.55
IGKV2D-38-201ENST00000518423 GRIN2AQ12879 1464 aa11.63□□□□□ -0.55
IGKV2D-38-201ENST00000518423 KIF27Q86VH2 1401 aa11.63□□□□□ -0.55
IGKV2D-38-201ENST00000518423 ERICH3Q5RHP9 1530 aa11.63□□□□□ -0.55
IGKV2D-38-201ENST00000518423 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
IGKV2D-38-201ENST00000518423 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
IGKV2D-38-201ENST00000518423 CEP170Q5SW79 1584 aa11.61□□□□□ -0.55
IGKV2D-38-201ENST00000518423 CUL7Q14999 1698 aa11.59□□□□□ -0.55
IGKV2D-38-201ENST00000518423 CYB5RLQ6IPT4 315 aa11.58□□□□□ -0.56
IGKV2D-38-201ENST00000518423 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
IGKV2D-38-201ENST00000518423 TTBK1Q5TCY1 1321 aaPredicted RBP11.55□□□□□ -0.56
IGKV2D-38-201ENST00000518423 RUSC2Q8N2Y8 1516 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms