RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
CTD-2270F17.1-201ENST00000518387 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
CTD-2270F17.1-201ENST00000518387 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
CTD-2270F17.1-201ENST00000518387 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
CTD-2270F17.1-201ENST00000518387 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
CTD-2270F17.1-201ENST00000518387 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
CTD-2270F17.1-201ENST00000518387 ABCC9O60706 1549 aa23.03■■□□□ 1.28
CTD-2270F17.1-201ENST00000518387 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
CTD-2270F17.1-201ENST00000518387 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
CTD-2270F17.1-201ENST00000518387 NACADO15069 1562 aa22.04■■□□□ 1.12
CTD-2270F17.1-201ENST00000518387 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
CTD-2270F17.1-201ENST00000518387 FOXD1Q16676 465 aa21.96■■□□□ 1.11
CTD-2270F17.1-201ENST00000518387 MYO15BQ96JP2 1530 aa21.82■■□□□ 1.08
CTD-2270F17.1-201ENST00000518387 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
CTD-2270F17.1-201ENST00000518387 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
CTD-2270F17.1-201ENST00000518387 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
CTD-2270F17.1-201ENST00000518387 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
CTD-2270F17.1-201ENST00000518387 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
CTD-2270F17.1-201ENST00000518387 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
CTD-2270F17.1-201ENST00000518387 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
CTD-2270F17.1-201ENST00000518387 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.94
CTD-2270F17.1-201ENST00000518387 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
CTD-2270F17.1-201ENST00000518387 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
CTD-2270F17.1-201ENST00000518387 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
CTD-2270F17.1-201ENST00000518387 MSH5O43196 834 aa20.6■□□□□ 0.89
CTD-2270F17.1-201ENST00000518387 PIAS4Q8N2W9 510 aaPredicted RBP20.6■□□□□ 0.89
CTD-2270F17.1-201ENST00000518387 SMARCA4P51532 1647 aa20.51■□□□□ 0.87
CTD-2270F17.1-201ENST00000518387 ADRA2BP18089 450 aa20.45■□□□□ 0.86
CTD-2270F17.1-201ENST00000518387 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
CTD-2270F17.1-201ENST00000518387 BAZ1AQ9NRL2 1556 aaPredicted RBP20.45■□□□□ 0.86
CTD-2270F17.1-201ENST00000518387 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
CTD-2270F17.1-201ENST00000518387 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
CTD-2270F17.1-201ENST00000518387 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
CTD-2270F17.1-201ENST00000518387 NCAPD3P42695 1498 aa20.29■□□□□ 0.84
CTD-2270F17.1-201ENST00000518387 POTEDQ86YR6 584 aa20.28■□□□□ 0.84
CTD-2270F17.1-201ENST00000518387 HMGXB3Q12766 1538 aa20.25■□□□□ 0.83
CTD-2270F17.1-201ENST00000518387 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
CTD-2270F17.1-201ENST00000518387 BAZ1BQ9UIG0 1483 aaKnown RBP20.22■□□□□ 0.83
CTD-2270F17.1-201ENST00000518387 WIZO95785 1651 aa20.19■□□□□ 0.82
CTD-2270F17.1-201ENST00000518387 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
CTD-2270F17.1-201ENST00000518387 NESP48681 1621 aa19.92■□□□□ 0.78
CTD-2270F17.1-201ENST00000518387 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
CTD-2270F17.1-201ENST00000518387 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
CTD-2270F17.1-201ENST00000518387 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
CTD-2270F17.1-201ENST00000518387 KIF21AQ7Z4S6 1674 aa19.77■□□□□ 0.76
CTD-2270F17.1-201ENST00000518387 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
CTD-2270F17.1-201ENST00000518387 PDS5BQ9NTI5 1447 aa19.65■□□□□ 0.74
CTD-2270F17.1-201ENST00000518387 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
CTD-2270F17.1-201ENST00000518387 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.73
CTD-2270F17.1-201ENST00000518387 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
CTD-2270F17.1-201ENST00000518387 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
CTD-2270F17.1-201ENST00000518387 CFTRP13569 1480 aa19.6■□□□□ 0.73
CTD-2270F17.1-201ENST00000518387 CUX2O14529 1486 aa19.58■□□□□ 0.72
CTD-2270F17.1-201ENST00000518387 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
CTD-2270F17.1-201ENST00000518387 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
CTD-2270F17.1-201ENST00000518387 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
CTD-2270F17.1-201ENST00000518387 WDR62O43379 1518 aa19.44■□□□□ 0.7
CTD-2270F17.1-201ENST00000518387 URB2Q14146 1524 aaKnown RBP19.36■□□□□ 0.69
CTD-2270F17.1-201ENST00000518387 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
CTD-2270F17.1-201ENST00000518387 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
CTD-2270F17.1-201ENST00000518387 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
CTD-2270F17.1-201ENST00000518387 CUX1P39880 1505 aa19.1■□□□□ 0.65
CTD-2270F17.1-201ENST00000518387 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
CTD-2270F17.1-201ENST00000518387 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
CTD-2270F17.1-201ENST00000518387 ZNF608Q9ULD9 1512 aaPredicted RBP19.05■□□□□ 0.64
CTD-2270F17.1-201ENST00000518387 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
CTD-2270F17.1-201ENST00000518387 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
CTD-2270F17.1-201ENST00000518387 EIF4G3O43432 1585 aaKnown RBP19.03■□□□□ 0.64
CTD-2270F17.1-201ENST00000518387 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
CTD-2270F17.1-201ENST00000518387 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
CTD-2270F17.1-201ENST00000518387 SOGA1O94964 1423 aa18.95■□□□□ 0.62
CTD-2270F17.1-201ENST00000518387 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
CTD-2270F17.1-201ENST00000518387 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
CTD-2270F17.1-201ENST00000518387 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.62
CTD-2270F17.1-201ENST00000518387 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
CTD-2270F17.1-201ENST00000518387 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
CTD-2270F17.1-201ENST00000518387 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.62
CTD-2270F17.1-201ENST00000518387 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
CTD-2270F17.1-201ENST00000518387 CHD1O14646 1710 aa18.85■□□□□ 0.61
CTD-2270F17.1-201ENST00000518387 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
CTD-2270F17.1-201ENST00000518387 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
CTD-2270F17.1-201ENST00000518387 ABCA10Q8WWZ4 1543 aa18.8■□□□□ 0.6
CTD-2270F17.1-201ENST00000518387 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
CTD-2270F17.1-201ENST00000518387 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.6
CTD-2270F17.1-201ENST00000518387 GAPVD1Q14C86 1478 aa18.76■□□□□ 0.59
CTD-2270F17.1-201ENST00000518387 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
CTD-2270F17.1-201ENST00000518387 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
CTD-2270F17.1-201ENST00000518387 FBLN2P98095 1184 aa18.72■□□□□ 0.59
CTD-2270F17.1-201ENST00000518387 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
CTD-2270F17.1-201ENST00000518387 MAGI1Q96QZ7 1491 aaPredicted RBP18.7■□□□□ 0.58
CTD-2270F17.1-201ENST00000518387 SYNJ2O15056 1496 aa18.64■□□□□ 0.57
CTD-2270F17.1-201ENST00000518387 ADAMTS12P58397 1594 aa18.64■□□□□ 0.57
CTD-2270F17.1-201ENST00000518387 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
CTD-2270F17.1-201ENST00000518387 CHMP7Q8WUX9 453 aaPredicted RBP18.61■□□□□ 0.57
CTD-2270F17.1-201ENST00000518387 ERICH3Q5RHP9 1530 aa18.59■□□□□ 0.57
CTD-2270F17.1-201ENST00000518387 RIMBP3CA6NJZ7 1639 aa18.56■□□□□ 0.56
CTD-2270F17.1-201ENST00000518387 RIMBP3BA6NNM3 1639 aa18.56■□□□□ 0.56
CTD-2270F17.1-201ENST00000518387 RIMBP3Q9UFD9 1639 aa18.56■□□□□ 0.56
CTD-2270F17.1-201ENST00000518387 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
CTD-2270F17.1-201ENST00000518387 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms