RNA–Protein interactions for RNA: ENST00000518343.5

MSR1-208, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-208ENST00000518343 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
MSR1-208ENST00000518343 CHIC1Q5VXU3 224 aa14.86□□□□□ -0.03
MSR1-208ENST00000518343 NISCHQ9Y2I1 1504 aa14.35□□□□□ -0.11
MSR1-208ENST00000518343 SENP3Q9H4L4 574 aaPredicted RBP13.54□□□□□ -0.24
MSR1-208ENST00000518343 PHF23Q9BUL5 403 aaPredicted RBP13.38□□□□□ -0.27
MSR1-208ENST00000518343 ABCC9O60706 1549 aa13.1□□□□□ -0.31
MSR1-208ENST00000518343 CCDC180Q9P1Z9 1646 aa13.06□□□□□ -0.32
MSR1-208ENST00000518343 FOXD1Q16676 465 aa12.75□□□□□ -0.37
MSR1-208ENST00000518343 RB1CC1Q8TDY2 1594 aa12.53□□□□□ -0.4
MSR1-208ENST00000518343 NACADO15069 1562 aa12.41□□□□□ -0.42
MSR1-208ENST00000518343 DNAJC5BQ9UF47 199 aa12.4□□□□□ -0.42
MSR1-208ENST00000518343 MYO15BQ96JP2 1530 aa12.23□□□□□ -0.45
MSR1-208ENST00000518343 POTEDQ86YR6 584 aa12.17□□□□□ -0.46
MSR1-208ENST00000518343 SHROOM4Q9ULL8 1493 aa12.12□□□□□ -0.47
MSR1-208ENST00000518343 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
MSR1-208ENST00000518343 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
MSR1-208ENST00000518343 UNC13AQ9UPW8 1703 aa12.11□□□□□ -0.47
MSR1-208ENST00000518343 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
MSR1-208ENST00000518343 DCAF1Q9Y4B6 1507 aa11.96□□□□□ -0.5
MSR1-208ENST00000518343 MSH5O43196 834 aa11.91□□□□□ -0.5
MSR1-208ENST00000518343 CECR2Q9BXF3 1484 aa11.9□□□□□ -0.5
MSR1-208ENST00000518343 CC2D2AQ9P2K1 1620 aa11.87□□□□□ -0.51
MSR1-208ENST00000518343 ZCCHC6Q5VYS8 1495 aaKnown RBP11.84□□□□□ -0.51
MSR1-208ENST00000518343 EIF4G1Q04637 1599 aaKnown RBP11.81□□□□□ -0.52
MSR1-208ENST00000518343 PIAS4Q8N2W9 510 aaPredicted RBP11.8□□□□□ -0.52
MSR1-208ENST00000518343 PPP6R1Q9UPN7 881 aa11.77□□□□□ -0.53
MSR1-208ENST00000518343 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
MSR1-208ENST00000518343 SCRIBQ14160 1630 aa11.72□□□□□ -0.53
MSR1-208ENST00000518343 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
MSR1-208ENST00000518343 ADRA2BP18089 450 aa11.68□□□□□ -0.54
MSR1-208ENST00000518343 CUX2O14529 1486 aa11.56□□□□□ -0.56
MSR1-208ENST00000518343 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
MSR1-208ENST00000518343 NCAPD3P42695 1498 aa11.43□□□□□ -0.58
MSR1-208ENST00000518343 SMARCA2P51531 1590 aa11.35□□□□□ -0.59
MSR1-208ENST00000518343 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
MSR1-208ENST00000518343 ATAD2BQ9ULI0 1458 aa11.3□□□□□ -0.6
MSR1-208ENST00000518343 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
MSR1-208ENST00000518343 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
MSR1-208ENST00000518343 BAZ1AQ9NRL2 1556 aaPredicted RBP11.21□□□□□ -0.61
MSR1-208ENST00000518343 BAZ1BQ9UIG0 1483 aaKnown RBP11.21□□□□□ -0.61
MSR1-208ENST00000518343 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
MSR1-208ENST00000518343 PDS5BQ9NTI5 1447 aa11.19□□□□□ -0.62
MSR1-208ENST00000518343 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
MSR1-208ENST00000518343 NESP48681 1621 aa11.14□□□□□ -0.63
MSR1-208ENST00000518343 KIF21AQ7Z4S6 1674 aa11.05□□□□□ -0.64
MSR1-208ENST00000518343 CADPSQ9ULU8 1353 aa11.04□□□□□ -0.64
MSR1-208ENST00000518343 MRC2Q9UBG0 1479 aa11.04□□□□□ -0.64
MSR1-208ENST00000518343 WDR62O43379 1518 aa11.02□□□□□ -0.65
MSR1-208ENST00000518343 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
MSR1-208ENST00000518343 MROH2BQ7Z745 1585 aa10.97□□□□□ -0.65
MSR1-208ENST00000518343 CEP164Q9UPV0 1460 aa10.96□□□□□ -0.65
MSR1-208ENST00000518343 OSCARQ8IYS5 282 aa10.96□□□□□ -0.65
MSR1-208ENST00000518343 FANCD2Q9BXW9 1451 aa10.89□□□□□ -0.67
MSR1-208ENST00000518343 CFTRP13569 1480 aa10.87□□□□□ -0.67
MSR1-208ENST00000518343 MAPK8IP2Q13387 824 aaPredicted RBP10.84□□□□□ -0.67
MSR1-208ENST00000518343 WIZO95785 1651 aa10.82□□□□□ -0.68
MSR1-208ENST00000518343 PRDM2Q13029 1718 aa10.78□□□□□ -0.68
MSR1-208ENST00000518343 ABCC8Q09428 1581 aa10.77□□□□□ -0.68
MSR1-208ENST00000518343 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
MSR1-208ENST00000518343 TOP2AP11388 1531 aaKnown RBP10.77□□□□□ -0.69
MSR1-208ENST00000518343 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
MSR1-208ENST00000518343 RIMBP3CA6NJZ7 1639 aa10.75□□□□□ -0.69
MSR1-208ENST00000518343 RIMBP3BA6NNM3 1639 aa10.75□□□□□ -0.69
MSR1-208ENST00000518343 RIMBP3Q9UFD9 1639 aa10.75□□□□□ -0.69
MSR1-208ENST00000518343 DMRT2Q9Y5R5 561 aa10.74□□□□□ -0.69
MSR1-208ENST00000518343 ARHGEF11O15085 1522 aa10.72□□□□□ -0.69
MSR1-208ENST00000518343 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
MSR1-208ENST00000518343 TOPBP1Q92547 1522 aa10.65□□□□□ -0.7
MSR1-208ENST00000518343 EIF4G3O43432 1585 aaKnown RBP10.63□□□□□ -0.71
MSR1-208ENST00000518343 DNMBPQ6XZF7 1577 aa10.63□□□□□ -0.71
MSR1-208ENST00000518343 ZNF608Q9ULD9 1512 aaPredicted RBP10.63□□□□□ -0.71
MSR1-208ENST00000518343 CYB5RLQ6IPT4 315 aa10.62□□□□□ -0.71
MSR1-208ENST00000518343 WDR97A6NE52 1622 aa10.62□□□□□ -0.71
MSR1-208ENST00000518343 TRHP20396 242 aaPredicted RBP10.6□□□□□ -0.71
MSR1-208ENST00000518343 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
MSR1-208ENST00000518343 CHD1O14646 1710 aa10.57□□□□□ -0.72
MSR1-208ENST00000518343 ARAP1Q96P48 1450 aa10.56□□□□□ -0.72
MSR1-208ENST00000518343 TARBP1Q13395 1621 aaKnown RBP10.56□□□□□ -0.72
MSR1-208ENST00000518343 FBLN2P98095 1184 aa10.54□□□□□ -0.72
MSR1-208ENST00000518343 AQRO60306 1485 aaKnown RBP eCLIP10.53□□□□□ -0.72
MSR1-208ENST00000518343 SYNJ1O43426 1573 aa10.52□□□□□ -0.72
MSR1-208ENST00000518343 POLA1P09884 1462 aaPredicted RBP10.52□□□□□ -0.73
MSR1-208ENST00000518343 MAGI1Q96QZ7 1491 aaPredicted RBP10.52□□□□□ -0.73
MSR1-208ENST00000518343 SCAF1Q9H7N4 1312 aaKnown RBP10.51□□□□□ -0.73
MSR1-208ENST00000518343 SOGA1O94964 1423 aa10.5□□□□□ -0.73
MSR1-208ENST00000518343 CHMP7Q8WUX9 453 aaPredicted RBP10.49□□□□□ -0.73
MSR1-208ENST00000518343 CLASP1Q7Z460 1538 aa10.48□□□□□ -0.73
MSR1-208ENST00000518343 GRIN2BQ13224 1484 aa10.47□□□□□ -0.73
MSR1-208ENST00000518343 SYNJ2O15056 1496 aa10.46□□□□□ -0.74
MSR1-208ENST00000518343 SNAPC4Q5SXM2 1469 aa10.44□□□□□ -0.74
MSR1-208ENST00000518343 TDRD9Q8NDG6 1382 aaKnown RBP10.43□□□□□ -0.74
MSR1-208ENST00000518343 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
MSR1-208ENST00000518343 RAD54L2Q9Y4B4 1467 aa10.41□□□□□ -0.74
MSR1-208ENST00000518343 CACNB1Q02641 598 aaPredicted RBP10.4□□□□□ -0.74
MSR1-208ENST00000518343 GAPVD1Q14C86 1478 aa10.39□□□□□ -0.75
MSR1-208ENST00000518343 PBRM1Q86U86 1689 aa10.35□□□□□ -0.75
MSR1-208ENST00000518343 ABCA10Q8WWZ4 1543 aa10.34□□□□□ -0.75
MSR1-208ENST00000518343 CUX1P39880 1505 aa10.33□□□□□ -0.76
MSR1-208ENST00000518343 ABCA5Q8WWZ7 1642 aa10.31□□□□□ -0.76
MSR1-208ENST00000518343 GRIN2AQ12879 1464 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms