RNA–Protein interactions for RNA: ENST00000518285.1

FAM49B-207, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-207ENST00000518285 NISCHQ9Y2I1 1504 aa45.51■■■■■ 4.88
FAM49B-207ENST00000518285 ABCC9O60706 1549 aa41.23■■■■■ 4.19
FAM49B-207ENST00000518285 CCDC180Q9P1Z9 1646 aa40.85■■■■■ 4.13
FAM49B-207ENST00000518285 RB1CC1Q8TDY2 1594 aa39.04■■■■□ 3.84
FAM49B-207ENST00000518285 DNAJC5BQ9UF47 199 aa38.9■■■■□ 3.82
FAM49B-207ENST00000518285 NACADO15069 1562 aa38.7■■■■□ 3.79
FAM49B-207ENST00000518285 DCAF8L2P0C7V8 631 aa38.7■■■■□ 3.79
FAM49B-207ENST00000518285 PABPN1Q86U42 306 aaKnown RBP eCLIP38.41■■■■□ 3.74
FAM49B-207ENST00000518285 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
FAM49B-207ENST00000518285 MYO15BQ96JP2 1530 aa38.03■■■■□ 3.68
FAM49B-207ENST00000518285 BICRAQ9NZM4 1560 aa37.94■■■■□ 3.66
FAM49B-207ENST00000518285 ZCCHC6Q5VYS8 1495 aaKnown RBP37.86■■■■□ 3.65
FAM49B-207ENST00000518285 DCAF1Q9Y4B6 1507 aa37.64■■■■□ 3.62
FAM49B-207ENST00000518285 SCRIBQ14160 1630 aa37.34■■■■□ 3.57
FAM49B-207ENST00000518285 SHROOM4Q9ULL8 1493 aa37.27■■■■□ 3.56
FAM49B-207ENST00000518285 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
FAM49B-207ENST00000518285 CECR2Q9BXF3 1484 aa37.12■■■■□ 3.53
FAM49B-207ENST00000518285 EIF4G1Q04637 1599 aaKnown RBP37.03■■■■□ 3.52
FAM49B-207ENST00000518285 DNAJC5Q9H3Z4 198 aa35.81■■■■□ 3.32
FAM49B-207ENST00000518285 NCAPD3P42695 1498 aa35.75■■■■□ 3.31
FAM49B-207ENST00000518285 ATAD2BQ9ULI0 1458 aa35.65■■■■□ 3.3
FAM49B-207ENST00000518285 ERCC6Q03468 1493 aa35.58■■■■□ 3.29
FAM49B-207ENST00000518285 SMARCA4P51532 1647 aa35.54■■■■□ 3.28
FAM49B-207ENST00000518285 CUX2O14529 1486 aa35.5■■■■□ 3.27
FAM49B-207ENST00000518285 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
FAM49B-207ENST00000518285 HMGXB3Q12766 1538 aa35.44■■■■□ 3.26
FAM49B-207ENST00000518285 NESP48681 1621 aa35.36■■■■□ 3.25
FAM49B-207ENST00000518285 BAZ1AQ9NRL2 1556 aaPredicted RBP35.32■■■■□ 3.24
FAM49B-207ENST00000518285 BAZ1BQ9UIG0 1483 aaKnown RBP35.3■■■■□ 3.24
FAM49B-207ENST00000518285 PEG3Q9GZU2 1588 aa35.13■■■■□ 3.21
FAM49B-207ENST00000518285 MROH2BQ7Z745 1585 aa35.11■■■■□ 3.21
FAM49B-207ENST00000518285 LAMC3Q9Y6N6 1575 aa34.96■■■■□ 3.19
FAM49B-207ENST00000518285 THOC2Q8NI27 1593 aaKnown RBP34.96■■■■□ 3.19
FAM49B-207ENST00000518285 KIF21AQ7Z4S6 1674 aa34.84■■■■□ 3.17
FAM49B-207ENST00000518285 PDS5BQ9NTI5 1447 aa34.81■■■■□ 3.16
FAM49B-207ENST00000518285 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
FAM49B-207ENST00000518285 CADPSQ9ULU8 1353 aa34.69■■■■□ 3.14
FAM49B-207ENST00000518285 WIZO95785 1651 aa34.69■■■■□ 3.14
FAM49B-207ENST00000518285 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
FAM49B-207ENST00000518285 WDR62O43379 1518 aa34.42■■■■□ 3.1
FAM49B-207ENST00000518285 CEP164Q9UPV0 1460 aa34.35■■■■□ 3.09
FAM49B-207ENST00000518285 FANCD2Q9BXW9 1451 aa34.32■■■■□ 3.08
FAM49B-207ENST00000518285 TRIM41Q8WV44 630 aa34.27■■■■□ 3.08
FAM49B-207ENST00000518285 TOP2AP11388 1531 aaKnown RBP34.26■■■■□ 3.08
FAM49B-207ENST00000518285 CFTRP13569 1480 aa34.23■■■■□ 3.07
FAM49B-207ENST00000518285 SUPT5HO00267 1087 aaKnown RBP34.17■■■■□ 3.06
FAM49B-207ENST00000518285 URB2Q14146 1524 aaKnown RBP34.05■■■■□ 3.04
FAM49B-207ENST00000518285 OSCARQ8IYS5 282 aa33.94■■■■□ 3.02
FAM49B-207ENST00000518285 CCDC88BA6NC98 1476 aa33.87■■■■□ 3.01
FAM49B-207ENST00000518285 PRDM2Q13029 1718 aa33.82■■■■□ 3
FAM49B-207ENST00000518285 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
FAM49B-207ENST00000518285 IFT140Q96RY7 1462 aa33.66■■■□□ 2.98
FAM49B-207ENST00000518285 TOPBP1Q92547 1522 aa33.63■■■□□ 2.97
FAM49B-207ENST00000518285 RIMBP3CA6NJZ7 1639 aa33.5■■■□□ 2.95
FAM49B-207ENST00000518285 RIMBP3BA6NNM3 1639 aa33.5■■■□□ 2.95
FAM49B-207ENST00000518285 RIMBP3Q9UFD9 1639 aa33.5■■■□□ 2.95
FAM49B-207ENST00000518285 ABCC8Q09428 1581 aa33.48■■■□□ 2.95
FAM49B-207ENST00000518285 DNMBPQ6XZF7 1577 aa33.46■■■□□ 2.95
FAM49B-207ENST00000518285 EIF4G3O43432 1585 aaKnown RBP33.44■■■□□ 2.94
FAM49B-207ENST00000518285 AQRO60306 1485 aaKnown RBP eCLIP33.37■■■□□ 2.93
FAM49B-207ENST00000518285 ARHGEF11O15085 1522 aa33.37■■■□□ 2.93
FAM49B-207ENST00000518285 TARBP1Q13395 1621 aaKnown RBP33.33■■■□□ 2.93
FAM49B-207ENST00000518285 POLA1P09884 1462 aaPredicted RBP33.28■■■□□ 2.92
FAM49B-207ENST00000518285 FBLN2P98095 1184 aa33.27■■■□□ 2.92
FAM49B-207ENST00000518285 CHD1O14646 1710 aa33.25■■■□□ 2.91
FAM49B-207ENST00000518285 CYB5RLQ6IPT4 315 aa33.22■■■□□ 2.91
FAM49B-207ENST00000518285 RAD54L2Q9Y4B4 1467 aa33.22■■■□□ 2.91
FAM49B-207ENST00000518285 SOGA1O94964 1423 aa33.15■■■□□ 2.9
FAM49B-207ENST00000518285 TDRD9Q8NDG6 1382 aaKnown RBP33.15■■■□□ 2.9
FAM49B-207ENST00000518285 FGD5Q6ZNL6 1462 aa33.05■■■□□ 2.88
FAM49B-207ENST00000518285 ARAP1Q96P48 1450 aa33.03■■■□□ 2.88
FAM49B-207ENST00000518285 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
FAM49B-207ENST00000518285 CUX1P39880 1505 aa32.99■■■□□ 2.87
FAM49B-207ENST00000518285 TRHP20396 242 aaPredicted RBP32.94■■■□□ 2.86
FAM49B-207ENST00000518285 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
FAM49B-207ENST00000518285 WDR97A6NE52 1622 aa32.88■■■□□ 2.85
FAM49B-207ENST00000518285 GRIN2BQ13224 1484 aa32.85■■■□□ 2.85
FAM49B-207ENST00000518285 MAGI1Q96QZ7 1491 aaPredicted RBP32.84■■■□□ 2.85
FAM49B-207ENST00000518285 CLASP1Q7Z460 1538 aa32.83■■■□□ 2.85
FAM49B-207ENST00000518285 SYNJ1O43426 1573 aa32.79■■■□□ 2.84
FAM49B-207ENST00000518285 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
FAM49B-207ENST00000518285 SYNJ2O15056 1496 aa32.75■■■□□ 2.83
FAM49B-207ENST00000518285 GAPVD1Q14C86 1478 aa32.73■■■□□ 2.83
FAM49B-207ENST00000518285 PBRM1Q86U86 1689 aa32.69■■■□□ 2.82
FAM49B-207ENST00000518285 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
FAM49B-207ENST00000518285 TOP2BQ02880 1626 aa32.6■■■□□ 2.81
FAM49B-207ENST00000518285 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
FAM49B-207ENST00000518285 BIVM-ERCC5R4GMW8 1640 aa32.56■■■□□ 2.8
FAM49B-207ENST00000518285 GRIN2AQ12879 1464 aa32.43■■■□□ 2.78
FAM49B-207ENST00000518285 ERCC6L2Q5T890 1561 aa32.39■■■□□ 2.78
FAM49B-207ENST00000518285 ADAMTS12P58397 1594 aa32.37■■■□□ 2.77
FAM49B-207ENST00000518285 CEP170Q5SW79 1584 aa32.34■■■□□ 2.77
FAM49B-207ENST00000518285 NUP160Q12769 1436 aa32.31■■■□□ 2.76
FAM49B-207ENST00000518285 FHAD1B1AJZ9 1412 aa32.28■■■□□ 2.76
FAM49B-207ENST00000518285 ERICH3Q5RHP9 1530 aa32.19■■■□□ 2.74
FAM49B-207ENST00000518285 SHROOM2Q13796 1616 aa32.17■■■□□ 2.74
FAM49B-207ENST00000518285 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
FAM49B-207ENST00000518285 AEBP2Q6ZN18 517 aaPredicted RBP32.11■■■□□ 2.73
FAM49B-207ENST00000518285 KIF27Q86VH2 1401 aa32.09■■■□□ 2.73
FAM49B-207ENST00000518285 PRG4Q92954 1404 aaPredicted RBP32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms