RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
BRD9-216ENST00000518251 ABCC9O60706 1549 aa22.69■■□□□ 1.22
BRD9-216ENST00000518251 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
BRD9-216ENST00000518251 RB1CC1Q8TDY2 1594 aa21.51■■□□□ 1.03
BRD9-216ENST00000518251 DNAJC5BQ9UF47 199 aa21.43■■□□□ 1.02
BRD9-216ENST00000518251 NACADO15069 1562 aa21.31■■□□□ 1
BRD9-216ENST00000518251 UNC13AQ9UPW8 1703 aa21.03■□□□□ 0.96
BRD9-216ENST00000518251 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
BRD9-216ENST00000518251 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
BRD9-216ENST00000518251 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
BRD9-216ENST00000518251 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
BRD9-216ENST00000518251 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
BRD9-216ENST00000518251 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
BRD9-216ENST00000518251 DCAF1Q9Y4B6 1507 aa20.62■□□□□ 0.89
BRD9-216ENST00000518251 CC2D2AQ9P2K1 1620 aa20.52■□□□□ 0.88
BRD9-216ENST00000518251 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
BRD9-216ENST00000518251 CECR2Q9BXF3 1484 aa20.47■□□□□ 0.87
BRD9-216ENST00000518251 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
BRD9-216ENST00000518251 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
BRD9-216ENST00000518251 CUX2O14529 1486 aa19.7■□□□□ 0.74
BRD9-216ENST00000518251 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
BRD9-216ENST00000518251 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
BRD9-216ENST00000518251 ATAD2BQ9ULI0 1458 aa19.58■□□□□ 0.72
BRD9-216ENST00000518251 HMGXB3Q12766 1538 aa19.57■□□□□ 0.72
BRD9-216ENST00000518251 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
BRD9-216ENST00000518251 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
BRD9-216ENST00000518251 NESP48681 1621 aa19.44■□□□□ 0.7
BRD9-216ENST00000518251 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
BRD9-216ENST00000518251 BAZ1AQ9NRL2 1556 aaPredicted RBP19.38■□□□□ 0.69
BRD9-216ENST00000518251 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
BRD9-216ENST00000518251 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
BRD9-216ENST00000518251 LAMC3Q9Y6N6 1575 aa19.28■□□□□ 0.68
BRD9-216ENST00000518251 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
BRD9-216ENST00000518251 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
BRD9-216ENST00000518251 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
BRD9-216ENST00000518251 WDR62O43379 1518 aa19.05■□□□□ 0.64
BRD9-216ENST00000518251 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
BRD9-216ENST00000518251 CADPSQ9ULU8 1353 aa19.01■□□□□ 0.63
BRD9-216ENST00000518251 WIZO95785 1651 aa18.96■□□□□ 0.63
BRD9-216ENST00000518251 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
BRD9-216ENST00000518251 FANCD2Q9BXW9 1451 aa18.84■□□□□ 0.61
BRD9-216ENST00000518251 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
BRD9-216ENST00000518251 CFTRP13569 1480 aa18.8■□□□□ 0.6
BRD9-216ENST00000518251 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
BRD9-216ENST00000518251 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
BRD9-216ENST00000518251 RSF1Q96T23 1441 aaPredicted RBP18.7■□□□□ 0.58
BRD9-216ENST00000518251 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
BRD9-216ENST00000518251 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
BRD9-216ENST00000518251 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
BRD9-216ENST00000518251 RIMBP3CA6NJZ7 1639 aa18.53■□□□□ 0.56
BRD9-216ENST00000518251 RIMBP3BA6NNM3 1639 aa18.53■□□□□ 0.56
BRD9-216ENST00000518251 RIMBP3Q9UFD9 1639 aa18.53■□□□□ 0.56
BRD9-216ENST00000518251 ZNF608Q9ULD9 1512 aaPredicted RBP18.53■□□□□ 0.56
BRD9-216ENST00000518251 IFT140Q96RY7 1462 aa18.52■□□□□ 0.55
BRD9-216ENST00000518251 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
BRD9-216ENST00000518251 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
BRD9-216ENST00000518251 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
BRD9-216ENST00000518251 ARHGEF11O15085 1522 aa18.46■□□□□ 0.55
BRD9-216ENST00000518251 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
BRD9-216ENST00000518251 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
BRD9-216ENST00000518251 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
BRD9-216ENST00000518251 CHD1O14646 1710 aa18.32■□□□□ 0.52
BRD9-216ENST00000518251 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
BRD9-216ENST00000518251 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.52
BRD9-216ENST00000518251 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.517e-7■■■■■ 39
BRD9-216ENST00000518251 RAD54L2Q9Y4B4 1467 aa18.17■□□□□ 0.5
BRD9-216ENST00000518251 CLASP1Q7Z460 1538 aa18.17■□□□□ 0.5
BRD9-216ENST00000518251 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
BRD9-216ENST00000518251 SNAPC4Q5SXM2 1469 aa18.15■□□□□ 0.5
BRD9-216ENST00000518251 CYB5RLQ6IPT4 315 aa18.15■□□□□ 0.5
BRD9-216ENST00000518251 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
BRD9-216ENST00000518251 SOGA1O94964 1423 aa18.09■□□□□ 0.49
BRD9-216ENST00000518251 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
BRD9-216ENST00000518251 CUX1P39880 1505 aa18.08■□□□□ 0.49
BRD9-216ENST00000518251 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
BRD9-216ENST00000518251 FBLN2P98095 1184 aa18.07■□□□□ 0.48
BRD9-216ENST00000518251 SYNJ1O43426 1573 aa18.07■□□□□ 0.48
BRD9-216ENST00000518251 GRIN2BQ13224 1484 aa18.02■□□□□ 0.48
BRD9-216ENST00000518251 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
BRD9-216ENST00000518251 TRHP20396 242 aaPredicted RBP18.01■□□□□ 0.47
BRD9-216ENST00000518251 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
BRD9-216ENST00000518251 ABCA5Q8WWZ7 1642 aa17.96■□□□□ 0.47
BRD9-216ENST00000518251 CHMP7Q8WUX9 453 aaPredicted RBP17.92■□□□□ 0.46
BRD9-216ENST00000518251 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
BRD9-216ENST00000518251 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
BRD9-216ENST00000518251 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
BRD9-216ENST00000518251 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.45
BRD9-216ENST00000518251 GRIN2AQ12879 1464 aa17.82■□□□□ 0.44
BRD9-216ENST00000518251 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
BRD9-216ENST00000518251 CEP170Q5SW79 1584 aa17.81■□□□□ 0.44
BRD9-216ENST00000518251 NUP160Q12769 1436 aa17.79■□□□□ 0.44
BRD9-216ENST00000518251 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
BRD9-216ENST00000518251 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
BRD9-216ENST00000518251 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
BRD9-216ENST00000518251 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
BRD9-216ENST00000518251 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
BRD9-216ENST00000518251 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
BRD9-216ENST00000518251 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
BRD9-216ENST00000518251 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
BRD9-216ENST00000518251 KIF13AQ9H1H9 1805 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms