RNA–Protein interactions for RNA: ENST00000518146.5

NSMCE2-205, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-205ENST00000518146 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
NSMCE2-205ENST00000518146 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
NSMCE2-205ENST00000518146 NISCHQ9Y2I1 1504 aa23.05■■□□□ 1.28
NSMCE2-205ENST00000518146 ABCC9O60706 1549 aa21.08■□□□□ 0.96
NSMCE2-205ENST00000518146 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
NSMCE2-205ENST00000518146 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
NSMCE2-205ENST00000518146 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
NSMCE2-205ENST00000518146 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
NSMCE2-205ENST00000518146 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
NSMCE2-205ENST00000518146 NACADO15069 1562 aa19.75■□□□□ 0.75
NSMCE2-205ENST00000518146 FOXD1Q16676 465 aa19.58■□□□□ 0.72
NSMCE2-205ENST00000518146 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
NSMCE2-205ENST00000518146 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
NSMCE2-205ENST00000518146 UNC13AQ9UPW8 1703 aa19.5■□□□□ 0.71
NSMCE2-205ENST00000518146 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
NSMCE2-205ENST00000518146 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
NSMCE2-205ENST00000518146 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
NSMCE2-205ENST00000518146 ZCCHC6Q5VYS8 1495 aaKnown RBP19.06■□□□□ 0.64
NSMCE2-205ENST00000518146 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
NSMCE2-205ENST00000518146 CC2D2AQ9P2K1 1620 aa19.04■□□□□ 0.64
NSMCE2-205ENST00000518146 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
NSMCE2-205ENST00000518146 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
NSMCE2-205ENST00000518146 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
NSMCE2-205ENST00000518146 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
NSMCE2-205ENST00000518146 POTEDQ86YR6 584 aa18.46■□□□□ 0.55
NSMCE2-205ENST00000518146 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
NSMCE2-205ENST00000518146 MSH5O43196 834 aa18.38■□□□□ 0.53
NSMCE2-205ENST00000518146 CUX2O14529 1486 aa18.32■□□□□ 0.52
NSMCE2-205ENST00000518146 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
NSMCE2-205ENST00000518146 NCAPD3P42695 1498 aa18.23■□□□□ 0.51
NSMCE2-205ENST00000518146 PIAS4Q8N2W9 510 aaPredicted RBP18.21■□□□□ 0.51
NSMCE2-205ENST00000518146 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
NSMCE2-205ENST00000518146 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
NSMCE2-205ENST00000518146 HMGXB3Q12766 1538 aa18.09■□□□□ 0.49
NSMCE2-205ENST00000518146 SMARCA2P51531 1590 aa18.08■□□□□ 0.49
NSMCE2-205ENST00000518146 ADRA2BP18089 450 aa18.08■□□□□ 0.48
NSMCE2-205ENST00000518146 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
NSMCE2-205ENST00000518146 NESP48681 1621 aa18.03■□□□□ 0.48
NSMCE2-205ENST00000518146 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
NSMCE2-205ENST00000518146 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
NSMCE2-205ENST00000518146 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
NSMCE2-205ENST00000518146 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
NSMCE2-205ENST00000518146 LAMC3Q9Y6N6 1575 aa17.88■□□□□ 0.45
NSMCE2-205ENST00000518146 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
NSMCE2-205ENST00000518146 PDS5BQ9NTI5 1447 aa17.78■□□□□ 0.44
NSMCE2-205ENST00000518146 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
NSMCE2-205ENST00000518146 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
NSMCE2-205ENST00000518146 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
NSMCE2-205ENST00000518146 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
NSMCE2-205ENST00000518146 WDR62O43379 1518 aa17.62■□□□□ 0.41
NSMCE2-205ENST00000518146 WIZO95785 1651 aa17.53■□□□□ 0.4
NSMCE2-205ENST00000518146 CEP164Q9UPV0 1460 aa17.52■□□□□ 0.4
NSMCE2-205ENST00000518146 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
NSMCE2-205ENST00000518146 CFTRP13569 1480 aa17.41■□□□□ 0.38
NSMCE2-205ENST00000518146 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
NSMCE2-205ENST00000518146 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
NSMCE2-205ENST00000518146 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
NSMCE2-205ENST00000518146 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
NSMCE2-205ENST00000518146 RIMBP3CA6NJZ7 1639 aa17.22■□□□□ 0.35
NSMCE2-205ENST00000518146 RIMBP3BA6NNM3 1639 aa17.22■□□□□ 0.35
NSMCE2-205ENST00000518146 RIMBP3Q9UFD9 1639 aa17.22■□□□□ 0.35
NSMCE2-205ENST00000518146 PRDM2Q13029 1718 aa17.22■□□□□ 0.35
NSMCE2-205ENST00000518146 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
NSMCE2-205ENST00000518146 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
NSMCE2-205ENST00000518146 ARHGEF11O15085 1522 aa17.15■□□□□ 0.34
NSMCE2-205ENST00000518146 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
NSMCE2-205ENST00000518146 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
NSMCE2-205ENST00000518146 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
NSMCE2-205ENST00000518146 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
NSMCE2-205ENST00000518146 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
NSMCE2-205ENST00000518146 CHD1O14646 1710 aa16.99■□□□□ 0.31
NSMCE2-205ENST00000518146 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
NSMCE2-205ENST00000518146 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
NSMCE2-205ENST00000518146 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.31
NSMCE2-205ENST00000518146 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
NSMCE2-205ENST00000518146 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
NSMCE2-205ENST00000518146 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
NSMCE2-205ENST00000518146 FBLN2P98095 1184 aa16.9■□□□□ 0.3
NSMCE2-205ENST00000518146 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
NSMCE2-205ENST00000518146 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
NSMCE2-205ENST00000518146 SOGA1O94964 1423 aa16.81■□□□□ 0.28
NSMCE2-205ENST00000518146 TDRD9Q8NDG6 1382 aaKnown RBP16.81■□□□□ 0.28
NSMCE2-205ENST00000518146 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
NSMCE2-205ENST00000518146 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
NSMCE2-205ENST00000518146 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
NSMCE2-205ENST00000518146 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
NSMCE2-205ENST00000518146 MAGI1Q96QZ7 1491 aaPredicted RBP16.75■□□□□ 0.27
NSMCE2-205ENST00000518146 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
NSMCE2-205ENST00000518146 GRIN2BQ13224 1484 aa16.72■□□□□ 0.27
NSMCE2-205ENST00000518146 CUX1P39880 1505 aa16.7■□□□□ 0.26
NSMCE2-205ENST00000518146 SYNJ2O15056 1496 aa16.7■□□□□ 0.26
NSMCE2-205ENST00000518146 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
NSMCE2-205ENST00000518146 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
NSMCE2-205ENST00000518146 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
NSMCE2-205ENST00000518146 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
NSMCE2-205ENST00000518146 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.24
NSMCE2-205ENST00000518146 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
NSMCE2-205ENST00000518146 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
NSMCE2-205ENST00000518146 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
NSMCE2-205ENST00000518146 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms