RNA–Protein interactions for RNA: ENST00000518122.5

GABRP-202, Transcript of gamma-aminobutyric acid type A receptor pi subunit, humanhuman

TSL 4

Gene GABRP, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRP-202ENST00000518122 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
GABRP-202ENST00000518122 CCDC180Q9P1Z9 1646 aa20.65■□□□□ 0.9
GABRP-202ENST00000518122 ABCC9O60706 1549 aa20.2■□□□□ 0.82
GABRP-202ENST00000518122 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
GABRP-202ENST00000518122 NACADO15069 1562 aa19.42■□□□□ 0.7
GABRP-202ENST00000518122 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
GABRP-202ENST00000518122 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
GABRP-202ENST00000518122 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
GABRP-202ENST00000518122 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
GABRP-202ENST00000518122 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
GABRP-202ENST00000518122 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
GABRP-202ENST00000518122 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
GABRP-202ENST00000518122 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
GABRP-202ENST00000518122 SHROOM4Q9ULL8 1493 aa18.67■□□□□ 0.58
GABRP-202ENST00000518122 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
GABRP-202ENST00000518122 EIF4G1Q04637 1599 aaKnown RBP18.36■□□□□ 0.53
GABRP-202ENST00000518122 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
GABRP-202ENST00000518122 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
GABRP-202ENST00000518122 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
GABRP-202ENST00000518122 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
GABRP-202ENST00000518122 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
GABRP-202ENST00000518122 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
GABRP-202ENST00000518122 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
GABRP-202ENST00000518122 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
GABRP-202ENST00000518122 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
GABRP-202ENST00000518122 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
GABRP-202ENST00000518122 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
GABRP-202ENST00000518122 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
GABRP-202ENST00000518122 WIZO95785 1651 aa17.7■□□□□ 0.42
GABRP-202ENST00000518122 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.39
GABRP-202ENST00000518122 NESP48681 1621 aa17.49■□□□□ 0.39
GABRP-202ENST00000518122 LAMC3Q9Y6N6 1575 aa17.44■□□□□ 0.38
GABRP-202ENST00000518122 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
GABRP-202ENST00000518122 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
GABRP-202ENST00000518122 PDS5BQ9NTI5 1447 aa17.32■□□□□ 0.36
GABRP-202ENST00000518122 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
GABRP-202ENST00000518122 CFTRP13569 1480 aa17.3■□□□□ 0.36
GABRP-202ENST00000518122 KIF21AQ7Z4S6 1674 aa17.27■□□□□ 0.36
GABRP-202ENST00000518122 CUX2O14529 1486 aa17.24■□□□□ 0.35
GABRP-202ENST00000518122 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
GABRP-202ENST00000518122 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
GABRP-202ENST00000518122 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
GABRP-202ENST00000518122 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
GABRP-202ENST00000518122 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
GABRP-202ENST00000518122 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
GABRP-202ENST00000518122 WDR62O43379 1518 aa17.1■□□□□ 0.33
GABRP-202ENST00000518122 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
GABRP-202ENST00000518122 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
GABRP-202ENST00000518122 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
GABRP-202ENST00000518122 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.3
GABRP-202ENST00000518122 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
GABRP-202ENST00000518122 CUX1P39880 1505 aa16.79■□□□□ 0.28
GABRP-202ENST00000518122 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
GABRP-202ENST00000518122 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
GABRP-202ENST00000518122 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
GABRP-202ENST00000518122 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
GABRP-202ENST00000518122 DNAJC5Q9H3Z4 198 aa16.72■□□□□ 0.27
GABRP-202ENST00000518122 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
GABRP-202ENST00000518122 SOGA1O94964 1423 aa16.7■□□□□ 0.26
GABRP-202ENST00000518122 WRNQ14191 1432 aaPredicted RBP eCLIP16.67■□□□□ 0.26
GABRP-202ENST00000518122 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
GABRP-202ENST00000518122 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
GABRP-202ENST00000518122 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
GABRP-202ENST00000518122 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
GABRP-202ENST00000518122 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.25
GABRP-202ENST00000518122 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
GABRP-202ENST00000518122 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
GABRP-202ENST00000518122 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
GABRP-202ENST00000518122 GRIN2BQ13224 1484 aa16.51■□□□□ 0.23
GABRP-202ENST00000518122 GAPVD1Q14C86 1478 aa16.51■□□□□ 0.23
GABRP-202ENST00000518122 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
GABRP-202ENST00000518122 ABCA5Q8WWZ7 1642 aa16.51■□□□□ 0.23
GABRP-202ENST00000518122 SNAPC4Q5SXM2 1469 aa16.48■□□□□ 0.23
GABRP-202ENST00000518122 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
GABRP-202ENST00000518122 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
GABRP-202ENST00000518122 CHD1O14646 1710 aa16.45■□□□□ 0.22
GABRP-202ENST00000518122 FBLN2P98095 1184 aa16.41■□□□□ 0.22
GABRP-202ENST00000518122 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
GABRP-202ENST00000518122 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
GABRP-202ENST00000518122 ERICH3Q5RHP9 1530 aa16.37■□□□□ 0.21
GABRP-202ENST00000518122 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
GABRP-202ENST00000518122 FHAD1B1AJZ9 1412 aa16.32■□□□□ 0.2
GABRP-202ENST00000518122 KIF27Q86VH2 1401 aa16.32■□□□□ 0.2
GABRP-202ENST00000518122 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
GABRP-202ENST00000518122 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
GABRP-202ENST00000518122 IGF1RP08069 1367 aa16.27■□□□□ 0.2
GABRP-202ENST00000518122 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
GABRP-202ENST00000518122 ARHGEF11O15085 1522 aa16.25■□□□□ 0.19
GABRP-202ENST00000518122 RIMBP3CA6NJZ7 1639 aa16.25■□□□□ 0.19
GABRP-202ENST00000518122 RIMBP3BA6NNM3 1639 aa16.25■□□□□ 0.19
GABRP-202ENST00000518122 RIMBP3Q9UFD9 1639 aa16.25■□□□□ 0.19
GABRP-202ENST00000518122 NUP160Q12769 1436 aa16.24■□□□□ 0.19
GABRP-202ENST00000518122 CEP170Q5SW79 1584 aa16.21■□□□□ 0.19
GABRP-202ENST00000518122 CUL7Q14999 1698 aa16.21■□□□□ 0.19
GABRP-202ENST00000518122 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
GABRP-202ENST00000518122 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
GABRP-202ENST00000518122 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
GABRP-202ENST00000518122 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
GABRP-202ENST00000518122 SHROOM2Q13796 1616 aa16.11■□□□□ 0.17
GABRP-202ENST00000518122 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms