RNA–Protein interactions for RNA: ENST00000517947.5

G3BP1-204, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 4

Gene G3BP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-204ENST00000517947 NISCHQ9Y2I1 1504 aa28.63■■■□□ 2.17
G3BP1-204ENST00000517947 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
G3BP1-204ENST00000517947 ABCC9O60706 1549 aa25.42■■□□□ 1.66
G3BP1-204ENST00000517947 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
G3BP1-204ENST00000517947 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
G3BP1-204ENST00000517947 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
G3BP1-204ENST00000517947 NACADO15069 1562 aa24.14■■□□□ 1.45
G3BP1-204ENST00000517947 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
G3BP1-204ENST00000517947 PABPN1Q86U42 306 aaKnown RBP eCLIP23.77■■□□□ 1.4
G3BP1-204ENST00000517947 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
G3BP1-204ENST00000517947 DNAJC5BQ9UF47 199 aa23.7■■□□□ 1.38
G3BP1-204ENST00000517947 UNC13AQ9UPW8 1703 aa23.64■■□□□ 1.37
G3BP1-204ENST00000517947 DCAF1Q9Y4B6 1507 aa23.63■■□□□ 1.37
G3BP1-204ENST00000517947 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
G3BP1-204ENST00000517947 BICRAQ9NZM4 1560 aa23.52■■□□□ 1.36
G3BP1-204ENST00000517947 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
G3BP1-204ENST00000517947 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
G3BP1-204ENST00000517947 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
G3BP1-204ENST00000517947 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
G3BP1-204ENST00000517947 CECR2Q9BXF3 1484 aa22.88■■□□□ 1.25
G3BP1-204ENST00000517947 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
G3BP1-204ENST00000517947 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
G3BP1-204ENST00000517947 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
G3BP1-204ENST00000517947 SMARCA2P51531 1590 aa22.2■■□□□ 1.14
G3BP1-204ENST00000517947 BAZ1AQ9NRL2 1556 aaPredicted RBP22.2■■□□□ 1.14
G3BP1-204ENST00000517947 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
G3BP1-204ENST00000517947 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
G3BP1-204ENST00000517947 BAZ1BQ9UIG0 1483 aaKnown RBP22.06■■□□□ 1.12
G3BP1-204ENST00000517947 PEG3Q9GZU2 1588 aa22.03■■□□□ 1.12
G3BP1-204ENST00000517947 ERCC6Q03468 1493 aa21.95■■□□□ 1.1
G3BP1-204ENST00000517947 NESP48681 1621 aa21.89■■□□□ 1.09
G3BP1-204ENST00000517947 WIZO95785 1651 aa21.79■■□□□ 1.08
G3BP1-204ENST00000517947 CUX2O14529 1486 aa21.79■■□□□ 1.08
G3BP1-204ENST00000517947 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
G3BP1-204ENST00000517947 RSF1Q96T23 1441 aaPredicted RBP21.71■■□□□ 1.07
G3BP1-204ENST00000517947 CADPSQ9ULU8 1353 aa21.67■■□□□ 1.06
G3BP1-204ENST00000517947 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
G3BP1-204ENST00000517947 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
G3BP1-204ENST00000517947 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
G3BP1-204ENST00000517947 THOC2Q8NI27 1593 aaKnown RBP21.55■■□□□ 1.04
G3BP1-204ENST00000517947 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
G3BP1-204ENST00000517947 CFTRP13569 1480 aa21.44■■□□□ 1.02
G3BP1-204ENST00000517947 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
G3BP1-204ENST00000517947 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.02
G3BP1-204ENST00000517947 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
G3BP1-204ENST00000517947 WDR62O43379 1518 aa21.34■■□□□ 1.01
G3BP1-204ENST00000517947 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
G3BP1-204ENST00000517947 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
G3BP1-204ENST00000517947 PRDM2Q13029 1718 aa21.14■□□□□ 0.97
G3BP1-204ENST00000517947 TOPBP1Q92547 1522 aa21■□□□□ 0.95
G3BP1-204ENST00000517947 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
G3BP1-204ENST00000517947 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
G3BP1-204ENST00000517947 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
G3BP1-204ENST00000517947 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
G3BP1-204ENST00000517947 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
G3BP1-204ENST00000517947 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
G3BP1-204ENST00000517947 POLA1P09884 1462 aaPredicted RBP20.8■□□□□ 0.92
G3BP1-204ENST00000517947 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
G3BP1-204ENST00000517947 AQRO60306 1485 aaKnown RBP eCLIP20.77■□□□□ 0.925e-8■■■■□ 20.5
G3BP1-204ENST00000517947 TARBP1Q13395 1621 aaKnown RBP20.77■□□□□ 0.92
G3BP1-204ENST00000517947 SOGA1O94964 1423 aa20.76■□□□□ 0.91
G3BP1-204ENST00000517947 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
G3BP1-204ENST00000517947 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
G3BP1-204ENST00000517947 CUX1P39880 1505 aa20.71■□□□□ 0.91
G3BP1-204ENST00000517947 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
G3BP1-204ENST00000517947 TDRD9Q8NDG6 1382 aaKnown RBP20.7■□□□□ 0.9
G3BP1-204ENST00000517947 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
G3BP1-204ENST00000517947 FBLN2P98095 1184 aa20.67■□□□□ 0.9
G3BP1-204ENST00000517947 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
G3BP1-204ENST00000517947 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
G3BP1-204ENST00000517947 CHD1O14646 1710 aa20.56■□□□□ 0.88
G3BP1-204ENST00000517947 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
G3BP1-204ENST00000517947 GRIN2BQ13224 1484 aa20.53■□□□□ 0.88
G3BP1-204ENST00000517947 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
G3BP1-204ENST00000517947 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
G3BP1-204ENST00000517947 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
G3BP1-204ENST00000517947 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
G3BP1-204ENST00000517947 ARHGEF11O15085 1522 aa20.5■□□□□ 0.87
G3BP1-204ENST00000517947 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
G3BP1-204ENST00000517947 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
G3BP1-204ENST00000517947 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
G3BP1-204ENST00000517947 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
G3BP1-204ENST00000517947 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
G3BP1-204ENST00000517947 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
G3BP1-204ENST00000517947 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
G3BP1-204ENST00000517947 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
G3BP1-204ENST00000517947 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.86
G3BP1-204ENST00000517947 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
G3BP1-204ENST00000517947 ABCA5Q8WWZ7 1642 aa20.38■□□□□ 0.85
G3BP1-204ENST00000517947 CLASP1Q7Z460 1538 aa20.33■□□□□ 0.85
G3BP1-204ENST00000517947 ARAP1Q96P48 1450 aa20.31■□□□□ 0.84
G3BP1-204ENST00000517947 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
G3BP1-204ENST00000517947 FHAD1B1AJZ9 1412 aa20.24■□□□□ 0.83
G3BP1-204ENST00000517947 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
G3BP1-204ENST00000517947 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
G3BP1-204ENST00000517947 NUP160Q12769 1436 aa20.17■□□□□ 0.82
G3BP1-204ENST00000517947 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
G3BP1-204ENST00000517947 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
G3BP1-204ENST00000517947 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
G3BP1-204ENST00000517947 IGF1RP08069 1367 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms