RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
SPIDR-203ENST00000517693 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.28
SPIDR-203ENST00000517693 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
SPIDR-203ENST00000517693 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
SPIDR-203ENST00000517693 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
SPIDR-203ENST00000517693 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.06
SPIDR-203ENST00000517693 ABCC9O60706 1549 aa21.54■■□□□ 1.04
SPIDR-203ENST00000517693 SHROOM4Q9ULL8 1493 aa21.46■■□□□ 1.03
SPIDR-203ENST00000517693 NACADO15069 1562 aa21.45■■□□□ 1.02
SPIDR-203ENST00000517693 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
SPIDR-203ENST00000517693 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
SPIDR-203ENST00000517693 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
SPIDR-203ENST00000517693 UNC13AQ9UPW8 1703 aa20.68■□□□□ 0.9
SPIDR-203ENST00000517693 RSF1Q96T23 1441 aaPredicted RBP20.48■□□□□ 0.87
SPIDR-203ENST00000517693 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
SPIDR-203ENST00000517693 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
SPIDR-203ENST00000517693 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
SPIDR-203ENST00000517693 MROH2BQ7Z745 1585 aa20.33■□□□□ 0.84
SPIDR-203ENST00000517693 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
SPIDR-203ENST00000517693 PABPN1Q86U42 306 aaKnown RBP eCLIP20.27■□□□□ 0.84
SPIDR-203ENST00000517693 WIZO95785 1651 aa20.17■□□□□ 0.82
SPIDR-203ENST00000517693 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.8
SPIDR-203ENST00000517693 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
SPIDR-203ENST00000517693 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
SPIDR-203ENST00000517693 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
SPIDR-203ENST00000517693 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
SPIDR-203ENST00000517693 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
SPIDR-203ENST00000517693 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
SPIDR-203ENST00000517693 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
SPIDR-203ENST00000517693 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
SPIDR-203ENST00000517693 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
SPIDR-203ENST00000517693 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
SPIDR-203ENST00000517693 TRIM41Q8WV44 630 aa19.58■□□□□ 0.72
SPIDR-203ENST00000517693 CC2D2AQ9P2K1 1620 aa19.55■□□□□ 0.72
SPIDR-203ENST00000517693 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
SPIDR-203ENST00000517693 CFTRP13569 1480 aa19.33■□□□□ 0.69
SPIDR-203ENST00000517693 WRNQ14191 1432 aaPredicted RBP eCLIP19.33■□□□□ 0.68
SPIDR-203ENST00000517693 PRDM2Q13029 1718 aa19.31■□□□□ 0.68
SPIDR-203ENST00000517693 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
SPIDR-203ENST00000517693 EEA1Q15075 1411 aa19.23■□□□□ 0.67
SPIDR-203ENST00000517693 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
SPIDR-203ENST00000517693 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
SPIDR-203ENST00000517693 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
SPIDR-203ENST00000517693 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
SPIDR-203ENST00000517693 FAM9AQ8IZU1 332 aaPredicted RBP19.09■□□□□ 0.65
SPIDR-203ENST00000517693 LOC105371045A0A1W2PR82 267 aa19.07■□□□□ 0.64
SPIDR-203ENST00000517693 CUX1P39880 1505 aa19.03■□□□□ 0.64
SPIDR-203ENST00000517693 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
SPIDR-203ENST00000517693 SOGA1O94964 1423 aa19.02■□□□□ 0.63
SPIDR-203ENST00000517693 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
SPIDR-203ENST00000517693 PDS5BQ9NTI5 1447 aa18.95■□□□□ 0.62
SPIDR-203ENST00000517693 CEP164Q9UPV0 1460 aa18.93■□□□□ 0.62
SPIDR-203ENST00000517693 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
SPIDR-203ENST00000517693 NESP48681 1621 aa18.91■□□□□ 0.62
SPIDR-203ENST00000517693 KIF21BO75037 1637 aa18.9■□□□□ 0.62
SPIDR-203ENST00000517693 GOLGA3Q08378 1498 aa18.89■□□□□ 0.61
SPIDR-203ENST00000517693 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
SPIDR-203ENST00000517693 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
SPIDR-203ENST00000517693 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.6
SPIDR-203ENST00000517693 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
SPIDR-203ENST00000517693 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
SPIDR-203ENST00000517693 ERICH3Q5RHP9 1530 aa18.78■□□□□ 0.6
SPIDR-203ENST00000517693 DNAJC5Q9H3Z4 198 aa18.77■□□□□ 0.59
SPIDR-203ENST00000517693 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
SPIDR-203ENST00000517693 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
SPIDR-203ENST00000517693 CUX2O14529 1486 aa18.73■□□□□ 0.59
SPIDR-203ENST00000517693 UBTFP17480 764 aaKnown RBP18.73■□□□□ 0.59
SPIDR-203ENST00000517693 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
SPIDR-203ENST00000517693 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
SPIDR-203ENST00000517693 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
SPIDR-203ENST00000517693 ABCA10Q8WWZ4 1543 aa18.71■□□□□ 0.59
SPIDR-203ENST00000517693 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
SPIDR-203ENST00000517693 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
SPIDR-203ENST00000517693 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
SPIDR-203ENST00000517693 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
SPIDR-203ENST00000517693 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
SPIDR-203ENST00000517693 IGF1RP08069 1367 aa18.59■□□□□ 0.57
SPIDR-203ENST00000517693 CUL7Q14999 1698 aa18.58■□□□□ 0.56
SPIDR-203ENST00000517693 WDR62O43379 1518 aa18.57■□□□□ 0.56
SPIDR-203ENST00000517693 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
SPIDR-203ENST00000517693 CLIP1P30622 1438 aa18.55■□□□□ 0.56
SPIDR-203ENST00000517693 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
SPIDR-203ENST00000517693 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
SPIDR-203ENST00000517693 TARBP1Q13395 1621 aaKnown RBP18.51■□□□□ 0.55
SPIDR-203ENST00000517693 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
SPIDR-203ENST00000517693 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
SPIDR-203ENST00000517693 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
SPIDR-203ENST00000517693 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
SPIDR-203ENST00000517693 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
SPIDR-203ENST00000517693 TDRD9Q8NDG6 1382 aaKnown RBP18.4■□□□□ 0.54
SPIDR-203ENST00000517693 PCGF6Q9BYE7 350 aa18.39■□□□□ 0.53
SPIDR-203ENST00000517693 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
SPIDR-203ENST00000517693 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
SPIDR-203ENST00000517693 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
SPIDR-203ENST00000517693 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
SPIDR-203ENST00000517693 EFCAB5A4FU69 1503 aa18.31■□□□□ 0.52
SPIDR-203ENST00000517693 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
SPIDR-203ENST00000517693 APLP2Q06481 763 aa18.3■□□□□ 0.52
SPIDR-203ENST00000517693 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
SPIDR-203ENST00000517693 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms