RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
CTNNA1-204ENST00000517656 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
CTNNA1-204ENST00000517656 ABCC9O60706 1549 aa18.89■□□□□ 0.61
CTNNA1-204ENST00000517656 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
CTNNA1-204ENST00000517656 NACADO15069 1562 aa17.9■□□□□ 0.46
CTNNA1-204ENST00000517656 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
CTNNA1-204ENST00000517656 MYO15BQ96JP2 1530 aa17.69■□□□□ 0.42
CTNNA1-204ENST00000517656 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
CTNNA1-204ENST00000517656 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
CTNNA1-204ENST00000517656 UNC13AQ9UPW8 1703 aa17.53■□□□□ 0.4
CTNNA1-204ENST00000517656 ZCCHC6Q5VYS8 1495 aaKnown RBP17.52■□□□□ 0.4
CTNNA1-204ENST00000517656 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
CTNNA1-204ENST00000517656 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
CTNNA1-204ENST00000517656 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
CTNNA1-204ENST00000517656 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
CTNNA1-204ENST00000517656 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
CTNNA1-204ENST00000517656 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
CTNNA1-204ENST00000517656 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
CTNNA1-204ENST00000517656 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
CTNNA1-204ENST00000517656 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
CTNNA1-204ENST00000517656 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
CTNNA1-204ENST00000517656 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
CTNNA1-204ENST00000517656 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
CTNNA1-204ENST00000517656 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
CTNNA1-204ENST00000517656 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
CTNNA1-204ENST00000517656 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
CTNNA1-204ENST00000517656 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
CTNNA1-204ENST00000517656 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
CTNNA1-204ENST00000517656 BAZ1BQ9UIG0 1483 aaKnown RBP16.31■□□□□ 0.2
CTNNA1-204ENST00000517656 CUX2O14529 1486 aa16.29■□□□□ 0.2
CTNNA1-204ENST00000517656 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
CTNNA1-204ENST00000517656 DNAJC5Q9H3Z4 198 aa16.23■□□□□ 0.19
CTNNA1-204ENST00000517656 NESP48681 1621 aa16.23■□□□□ 0.19
CTNNA1-204ENST00000517656 LAMC3Q9Y6N6 1575 aa16.14■□□□□ 0.17
CTNNA1-204ENST00000517656 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-204ENST00000517656 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
CTNNA1-204ENST00000517656 WIZO95785 1651 aa16.05■□□□□ 0.16
CTNNA1-204ENST00000517656 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
CTNNA1-204ENST00000517656 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
CTNNA1-204ENST00000517656 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
CTNNA1-204ENST00000517656 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
CTNNA1-204ENST00000517656 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
CTNNA1-204ENST00000517656 WDR62O43379 1518 aa15.87■□□□□ 0.13
CTNNA1-204ENST00000517656 CFTRP13569 1480 aa15.85■□□□□ 0.13
CTNNA1-204ENST00000517656 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
CTNNA1-204ENST00000517656 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
CTNNA1-204ENST00000517656 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
CTNNA1-204ENST00000517656 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
CTNNA1-204ENST00000517656 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
CTNNA1-204ENST00000517656 IFT140Q96RY7 1462 aa15.54■□□□□ 0.08
CTNNA1-204ENST00000517656 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
CTNNA1-204ENST00000517656 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
CTNNA1-204ENST00000517656 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
CTNNA1-204ENST00000517656 ZNF608Q9ULD9 1512 aaPredicted RBP15.5■□□□□ 0.07
CTNNA1-204ENST00000517656 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
CTNNA1-204ENST00000517656 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
CTNNA1-204ENST00000517656 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
CTNNA1-204ENST00000517656 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
CTNNA1-204ENST00000517656 POLA1P09884 1462 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-204ENST00000517656 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.058e-7■■■■■ 28.7
CTNNA1-204ENST00000517656 SOGA1O94964 1423 aa15.32■□□□□ 0.04
CTNNA1-204ENST00000517656 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
CTNNA1-204ENST00000517656 RIMBP3CA6NJZ7 1639 aa15.31■□□□□ 0.04
CTNNA1-204ENST00000517656 RIMBP3BA6NNM3 1639 aa15.31■□□□□ 0.04
CTNNA1-204ENST00000517656 RIMBP3Q9UFD9 1639 aa15.31■□□□□ 0.04
CTNNA1-204ENST00000517656 FGD5Q6ZNL6 1462 aa15.29■□□□□ 0.04
CTNNA1-204ENST00000517656 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
CTNNA1-204ENST00000517656 CUX1P39880 1505 aa15.27■□□□□ 0.04
CTNNA1-204ENST00000517656 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.04
CTNNA1-204ENST00000517656 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
CTNNA1-204ENST00000517656 CHD1O14646 1710 aa15.25■□□□□ 0.03
CTNNA1-204ENST00000517656 FBLN2P98095 1184 aa15.24■□□□□ 0.03
CTNNA1-204ENST00000517656 SUPT5HO00267 1087 aaKnown RBP15.23■□□□□ 0.03
CTNNA1-204ENST00000517656 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
CTNNA1-204ENST00000517656 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
CTNNA1-204ENST00000517656 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
CTNNA1-204ENST00000517656 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
CTNNA1-204ENST00000517656 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
CTNNA1-204ENST00000517656 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
CTNNA1-204ENST00000517656 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
CTNNA1-204ENST00000517656 CLASP1Q7Z460 1538 aa15.13■□□□□ 0.01
CTNNA1-204ENST00000517656 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
CTNNA1-204ENST00000517656 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
CTNNA1-204ENST00000517656 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
CTNNA1-204ENST00000517656 ABCA5Q8WWZ7 1642 aa15.09■□□□□ 0.01
CTNNA1-204ENST00000517656 PBRM1Q86U86 1689 aa15.08■□□□□ 0
CTNNA1-204ENST00000517656 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0
CTNNA1-204ENST00000517656 TOP2BQ02880 1626 aa15.04■□□□□ -0
CTNNA1-204ENST00000517656 BIVM-ERCC5R4GMW8 1640 aa15.03■□□□□ -0
CTNNA1-204ENST00000517656 GRIN2AQ12879 1464 aa14.99□□□□□ -0.01
CTNNA1-204ENST00000517656 ADAMTS12P58397 1594 aa14.98□□□□□ -0.01
CTNNA1-204ENST00000517656 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
CTNNA1-204ENST00000517656 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
CTNNA1-204ENST00000517656 NUP160Q12769 1436 aa14.94□□□□□ -0.02
CTNNA1-204ENST00000517656 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
CTNNA1-204ENST00000517656 CEP170Q5SW79 1584 aa14.92□□□□□ -0.02
CTNNA1-204ENST00000517656 ERCC6L2Q5T890 1561 aa14.88□□□□□ -0.03
CTNNA1-204ENST00000517656 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
CTNNA1-204ENST00000517656 PRG4Q92954 1404 aaPredicted RBP14.78□□□□□ -0.04
CTNNA1-204ENST00000517656 JPH4Q96JJ6 628 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 292.5 ms