RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 NISCHQ9Y2I1 1504 aa51.49■■■■■ 5.83
MTCL1-204ENST00000517554 CCDC180Q9P1Z9 1646 aa45.68■■■■■ 4.9
MTCL1-204ENST00000517554 ABCC9O60706 1549 aa44.81■■■■■ 4.76
MTCL1-204ENST00000517554 RB1CC1Q8TDY2 1594 aa43■■■■■ 4.47
MTCL1-204ENST00000517554 DCAF8L2P0C7V8 631 aa43■■■■■ 4.47
MTCL1-204ENST00000517554 NACADO15069 1562 aa42.97■■■■■ 4.47
MTCL1-204ENST00000517554 ZCCHC6Q5VYS8 1495 aaKnown RBP42.9■■■■■ 4.46
MTCL1-204ENST00000517554 MYO15BQ96JP2 1530 aa42.73■■■■■ 4.43
MTCL1-204ENST00000517554 DCAF1Q9Y4B6 1507 aa42.56■■■■■ 4.4
MTCL1-204ENST00000517554 UNC13AQ9UPW8 1703 aa42.08■■■■■ 4.33
MTCL1-204ENST00000517554 PABPN1Q86U42 306 aaKnown RBP eCLIP41.91■■■■■ 4.3
MTCL1-204ENST00000517554 BICRAQ9NZM4 1560 aa41.83■■■■■ 4.29
MTCL1-204ENST00000517554 SCRIBQ14160 1630 aa41.76■■■■■ 4.27
MTCL1-204ENST00000517554 DNAJC5BQ9UF47 199 aa41.25■■■■■ 4.19
MTCL1-204ENST00000517554 SHROOM4Q9ULL8 1493 aa41.24■■■■■ 4.19
MTCL1-204ENST00000517554 EIF4G1Q04637 1599 aaKnown RBP40.67■■■■■ 4.1
MTCL1-204ENST00000517554 CC2D2AQ9P2K1 1620 aa40.5■■■■■ 4.07
MTCL1-204ENST00000517554 CECR2Q9BXF3 1484 aa40.23■■■■■ 4.03
MTCL1-204ENST00000517554 SMARCA4P51532 1647 aa39.93■■■■□ 3.98
MTCL1-204ENST00000517554 BAZ1AQ9NRL2 1556 aaPredicted RBP39.85■■■■□ 3.97
MTCL1-204ENST00000517554 ATAD2BQ9ULI0 1458 aa39.75■■■■□ 3.95
MTCL1-204ENST00000517554 MROH2BQ7Z745 1585 aa39.73■■■■□ 3.95
MTCL1-204ENST00000517554 NCAPD3P42695 1498 aa39.71■■■■□ 3.95
MTCL1-204ENST00000517554 SMARCA2P51531 1590 aa39.61■■■■□ 3.93
MTCL1-204ENST00000517554 PEG3Q9GZU2 1588 aa39.54■■■■□ 3.92
MTCL1-204ENST00000517554 HMGXB3Q12766 1538 aa39.47■■■■□ 3.91
MTCL1-204ENST00000517554 BAZ1BQ9UIG0 1483 aaKnown RBP39.36■■■■□ 3.89
MTCL1-204ENST00000517554 RSF1Q96T23 1441 aaPredicted RBP39.27■■■■□ 3.88
MTCL1-204ENST00000517554 WIZO95785 1651 aa39.27■■■■□ 3.88
MTCL1-204ENST00000517554 NESP48681 1621 aa38.81■■■■□ 3.8
MTCL1-204ENST00000517554 TOP2AP11388 1531 aaKnown RBP38.81■■■■□ 3.8
MTCL1-204ENST00000517554 LAMC3Q9Y6N6 1575 aa38.6■■■■□ 3.77
MTCL1-204ENST00000517554 CADPSQ9ULU8 1353 aa38.55■■■■□ 3.76
MTCL1-204ENST00000517554 ERCC6Q03468 1493 aa38.53■■■■□ 3.76
MTCL1-204ENST00000517554 CCDC88BA6NC98 1476 aa38.41■■■■□ 3.74
MTCL1-204ENST00000517554 PDS5BQ9NTI5 1447 aa38.34■■■■□ 3.73
MTCL1-204ENST00000517554 CFTRP13569 1480 aa38.33■■■■□ 3.73
MTCL1-204ENST00000517554 KIF21AQ7Z4S6 1674 aa38.28■■■■□ 3.72
MTCL1-204ENST00000517554 SUPT5HO00267 1087 aaKnown RBP38.25■■■■□ 3.71
MTCL1-204ENST00000517554 THOC2Q8NI27 1593 aaKnown RBP38.17■■■■□ 3.7
MTCL1-204ENST00000517554 CUX2O14529 1486 aa38.12■■■■□ 3.69
MTCL1-204ENST00000517554 FANCD2Q9BXW9 1451 aa38.09■■■■□ 3.69
MTCL1-204ENST00000517554 CEP164Q9UPV0 1460 aa38.01■■■■□ 3.68
MTCL1-204ENST00000517554 MRC2Q9UBG0 1479 aa37.98■■■■□ 3.67
MTCL1-204ENST00000517554 PRDM2Q13029 1718 aa37.92■■■■□ 3.66
MTCL1-204ENST00000517554 WDR62O43379 1518 aa37.86■■■■□ 3.65
MTCL1-204ENST00000517554 URB2Q14146 1524 aaKnown RBP37.77■■■■□ 3.64
MTCL1-204ENST00000517554 TOPBP1Q92547 1522 aa37.5■■■■□ 3.59
MTCL1-204ENST00000517554 DNMBPQ6XZF7 1577 aa37.42■■■■□ 3.58
MTCL1-204ENST00000517554 ABCC8Q09428 1581 aa37.4■■■■□ 3.58
MTCL1-204ENST00000517554 CUX1P39880 1505 aa37.25■■■■□ 3.55
MTCL1-204ENST00000517554 IFT140Q96RY7 1462 aa37.22■■■■□ 3.55
MTCL1-204ENST00000517554 POLA1P09884 1462 aaPredicted RBP37.2■■■■□ 3.55
MTCL1-204ENST00000517554 ZNF608Q9ULD9 1512 aaPredicted RBP37.14■■■■□ 3.54
MTCL1-204ENST00000517554 TARBP1Q13395 1621 aaKnown RBP37.11■■■■□ 3.53
MTCL1-204ENST00000517554 FGD5Q6ZNL6 1462 aa37.09■■■■□ 3.53
MTCL1-204ENST00000517554 RAD54L2Q9Y4B4 1467 aa37.07■■■■□ 3.52
MTCL1-204ENST00000517554 DNAJC5Q9H3Z4 198 aa37.04■■■■□ 3.52
MTCL1-204ENST00000517554 SOGA1O94964 1423 aa37.02■■■■□ 3.52
MTCL1-204ENST00000517554 WRNQ14191 1432 aaPredicted RBP eCLIP36.97■■■■□ 3.51
MTCL1-204ENST00000517554 EIF4G3O43432 1585 aaKnown RBP36.93■■■■□ 3.5
MTCL1-204ENST00000517554 AQRO60306 1485 aaKnown RBP eCLIP36.93■■■■□ 3.54e-8■■■■□ 22.5
MTCL1-204ENST00000517554 SYNJ1O43426 1573 aa36.92■■■■□ 3.5
MTCL1-204ENST00000517554 TOP2BQ02880 1626 aa36.88■■■■□ 3.49
MTCL1-204ENST00000517554 BIVM-ERCC5R4GMW8 1640 aa36.87■■■■□ 3.49
MTCL1-204ENST00000517554 TDRD9Q8NDG6 1382 aaKnown RBP36.86■■■■□ 3.49
MTCL1-204ENST00000517554 WDR97A6NE52 1622 aa36.78■■■■□ 3.48
MTCL1-204ENST00000517554 ABCA10Q8WWZ4 1543 aa36.72■■■■□ 3.47
MTCL1-204ENST00000517554 GAPVD1Q14C86 1478 aa36.58■■■■□ 3.45
MTCL1-204ENST00000517554 OSCARQ8IYS5 282 aa36.57■■■■□ 3.45
MTCL1-204ENST00000517554 ABCA5Q8WWZ7 1642 aa36.57■■■■□ 3.45
MTCL1-204ENST00000517554 GRIN2BQ13224 1484 aa36.56■■■■□ 3.44
MTCL1-204ENST00000517554 SNAPC4Q5SXM2 1469 aa36.54■■■■□ 3.44
MTCL1-204ENST00000517554 PBRM1Q86U86 1689 aa36.47■■■■□ 3.43
MTCL1-204ENST00000517554 MAGI1Q96QZ7 1491 aaPredicted RBP36.45■■■■□ 3.43
MTCL1-204ENST00000517554 CHD1O14646 1710 aa36.45■■■■□ 3.42
MTCL1-204ENST00000517554 FBLN2P98095 1184 aa36.41■■■■□ 3.42
MTCL1-204ENST00000517554 SYNJ2O15056 1496 aa36.33■■■■□ 3.41
MTCL1-204ENST00000517554 CHMP7Q8WUX9 453 aaPredicted RBP36.31■■■■□ 3.4
MTCL1-204ENST00000517554 ERICH3Q5RHP9 1530 aa36.26■■■■□ 3.39
MTCL1-204ENST00000517554 ADAMTS12P58397 1594 aa36.21■■■■□ 3.39
MTCL1-204ENST00000517554 KIF27Q86VH2 1401 aa36.16■■■■□ 3.38
MTCL1-204ENST00000517554 FHAD1B1AJZ9 1412 aa36.15■■■■□ 3.38
MTCL1-204ENST00000517554 GRIN2AQ12879 1464 aa36.11■■■■□ 3.37
MTCL1-204ENST00000517554 IGF1RP08069 1367 aa36.11■■■■□ 3.37
MTCL1-204ENST00000517554 CLASP1Q7Z460 1538 aa36.09■■■■□ 3.37
MTCL1-204ENST00000517554 TRIM41Q8WV44 630 aa36.08■■■■□ 3.37
MTCL1-204ENST00000517554 ARHGEF11O15085 1522 aa36.01■■■■□ 3.36
MTCL1-204ENST00000517554 RIMBP3CA6NJZ7 1639 aa36.01■■■■□ 3.35
MTCL1-204ENST00000517554 RIMBP3BA6NNM3 1639 aa36.01■■■■□ 3.35
MTCL1-204ENST00000517554 RIMBP3Q9UFD9 1639 aa36.01■■■■□ 3.35
MTCL1-204ENST00000517554 RUSC2Q8N2Y8 1516 aa35.98■■■■□ 3.35
MTCL1-204ENST00000517554 NUP160Q12769 1436 aa35.98■■■■□ 3.35
MTCL1-204ENST00000517554 CEP170Q5SW79 1584 aa35.96■■■■□ 3.35
MTCL1-204ENST00000517554 CUL7Q14999 1698 aa35.89■■■■□ 3.34
MTCL1-204ENST00000517554 CARMIL1Q5VZK9 1371 aa35.84■■■■□ 3.33
MTCL1-204ENST00000517554 ARAP1Q96P48 1450 aa35.76■■■■□ 3.31
MTCL1-204ENST00000517554 CHIC1Q5VXU3 224 aa35.74■■■■□ 3.31
MTCL1-204ENST00000517554 CYB5RLQ6IPT4 315 aa35.69■■■■□ 3.3
MTCL1-204ENST00000517554 SHROOM2Q13796 1616 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms