RNA–Protein interactions for RNA: ENST00000517504.5

TNIP1-204, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5

Gene TNIP1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-204ENST00000517504 NISCHQ9Y2I1 1504 aa18.29■□□□□ 0.52
TNIP1-204ENST00000517504 CCDC180Q9P1Z9 1646 aa16.44■□□□□ 0.22
TNIP1-204ENST00000517504 ABCC9O60706 1549 aa16.18■□□□□ 0.18
TNIP1-204ENST00000517504 RB1CC1Q8TDY2 1594 aa15.5■□□□□ 0.07
TNIP1-204ENST00000517504 NACADO15069 1562 aa15.43■□□□□ 0.06
TNIP1-204ENST00000517504 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
TNIP1-204ENST00000517504 MYO15BQ96JP2 1530 aa15.27■□□□□ 0.04
TNIP1-204ENST00000517504 ZCCHC6Q5VYS8 1495 aaKnown RBP15.23■□□□□ 0.03
TNIP1-204ENST00000517504 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.03
TNIP1-204ENST00000517504 DCAF1Q9Y4B6 1507 aa15.14■□□□□ 0.01
TNIP1-204ENST00000517504 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
TNIP1-204ENST00000517504 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
TNIP1-204ENST00000517504 DNAJC5BQ9UF47 199 aa14.99□□□□□ -0.01
TNIP1-204ENST00000517504 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
TNIP1-204ENST00000517504 SHROOM4Q9ULL8 1493 aa14.88□□□□□ -0.03
TNIP1-204ENST00000517504 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
TNIP1-204ENST00000517504 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
TNIP1-204ENST00000517504 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
TNIP1-204ENST00000517504 SMARCA4P51532 1647 aa14.29□□□□□ -0.12
TNIP1-204ENST00000517504 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
TNIP1-204ENST00000517504 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
TNIP1-204ENST00000517504 BAZ1AQ9NRL2 1556 aaPredicted RBP14.2□□□□□ -0.14
TNIP1-204ENST00000517504 SMARCA2P51531 1590 aa14.19□□□□□ -0.14
TNIP1-204ENST00000517504 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
TNIP1-204ENST00000517504 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
TNIP1-204ENST00000517504 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
TNIP1-204ENST00000517504 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
TNIP1-204ENST00000517504 WIZO95785 1651 aa13.98□□□□□ -0.17
TNIP1-204ENST00000517504 NESP48681 1621 aa13.97□□□□□ -0.17
TNIP1-204ENST00000517504 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
TNIP1-204ENST00000517504 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
TNIP1-204ENST00000517504 CUX2O14529 1486 aa13.9□□□□□ -0.18
TNIP1-204ENST00000517504 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
TNIP1-204ENST00000517504 THOC2Q8NI27 1593 aaKnown RBP13.87□□□□□ -0.19
TNIP1-204ENST00000517504 RSF1Q96T23 1441 aaPredicted RBP13.84□□□□□ -0.19
TNIP1-204ENST00000517504 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
TNIP1-204ENST00000517504 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
TNIP1-204ENST00000517504 PDS5BQ9NTI5 1447 aa13.75□□□□□ -0.21
TNIP1-204ENST00000517504 PRDM2Q13029 1718 aa13.71□□□□□ -0.21
TNIP1-204ENST00000517504 WDR62O43379 1518 aa13.68□□□□□ -0.22
TNIP1-204ENST00000517504 CFTRP13569 1480 aa13.67□□□□□ -0.22
TNIP1-204ENST00000517504 MRC2Q9UBG0 1479 aa13.67□□□□□ -0.22
TNIP1-204ENST00000517504 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
TNIP1-204ENST00000517504 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
TNIP1-204ENST00000517504 DNAJC5Q9H3Z4 198 aa13.62□□□□□ -0.23
TNIP1-204ENST00000517504 CCDC88BA6NC98 1476 aa13.59□□□□□ -0.23
TNIP1-204ENST00000517504 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
TNIP1-204ENST00000517504 TOPBP1Q92547 1522 aa13.42□□□□□ -0.26
TNIP1-204ENST00000517504 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
TNIP1-204ENST00000517504 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
TNIP1-204ENST00000517504 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
TNIP1-204ENST00000517504 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
TNIP1-204ENST00000517504 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.28
TNIP1-204ENST00000517504 TARBP1Q13395 1621 aaKnown RBP13.33□□□□□ -0.28
TNIP1-204ENST00000517504 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
TNIP1-204ENST00000517504 CUX1P39880 1505 aa13.26□□□□□ -0.29
TNIP1-204ENST00000517504 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
TNIP1-204ENST00000517504 CHD1O14646 1710 aa13.24□□□□□ -0.29
TNIP1-204ENST00000517504 WDR97A6NE52 1622 aa13.23□□□□□ -0.29
TNIP1-204ENST00000517504 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
TNIP1-204ENST00000517504 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.3
TNIP1-204ENST00000517504 AQRO60306 1485 aaKnown RBP eCLIP13.2□□□□□ -0.35e-7■■■■□ 26.3
TNIP1-204ENST00000517504 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
TNIP1-204ENST00000517504 SOGA1O94964 1423 aa13.16□□□□□ -0.3
TNIP1-204ENST00000517504 PBRM1Q86U86 1689 aa13.15□□□□□ -0.31
TNIP1-204ENST00000517504 RIMBP3CA6NJZ7 1639 aa13.14□□□□□ -0.31
TNIP1-204ENST00000517504 RIMBP3BA6NNM3 1639 aa13.14□□□□□ -0.31
TNIP1-204ENST00000517504 RIMBP3Q9UFD9 1639 aa13.14□□□□□ -0.31
TNIP1-204ENST00000517504 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
TNIP1-204ENST00000517504 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
TNIP1-204ENST00000517504 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
TNIP1-204ENST00000517504 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
TNIP1-204ENST00000517504 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
TNIP1-204ENST00000517504 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
TNIP1-204ENST00000517504 ARHGEF11O15085 1522 aa13.09□□□□□ -0.31
TNIP1-204ENST00000517504 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.31
TNIP1-204ENST00000517504 MAGI1Q96QZ7 1491 aaPredicted RBP13.08□□□□□ -0.32
TNIP1-204ENST00000517504 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
TNIP1-204ENST00000517504 GRIN2BQ13224 1484 aa13.07□□□□□ -0.32
TNIP1-204ENST00000517504 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
TNIP1-204ENST00000517504 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
TNIP1-204ENST00000517504 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
TNIP1-204ENST00000517504 SYNJ2O15056 1496 aa13.02□□□□□ -0.33
TNIP1-204ENST00000517504 ADAMTS12P58397 1594 aa13□□□□□ -0.33
TNIP1-204ENST00000517504 FBLN2P98095 1184 aa13□□□□□ -0.33
TNIP1-204ENST00000517504 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
TNIP1-204ENST00000517504 CHIC1Q5VXU3 224 aa12.97□□□□□ -0.33
TNIP1-204ENST00000517504 CHMP7Q8WUX9 453 aaPredicted RBP12.94□□□□□ -0.34
TNIP1-204ENST00000517504 GRIN2AQ12879 1464 aa12.93□□□□□ -0.34
TNIP1-204ENST00000517504 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
TNIP1-204ENST00000517504 CEP170Q5SW79 1584 aa12.91□□□□□ -0.34
TNIP1-204ENST00000517504 FHAD1B1AJZ9 1412 aa12.88□□□□□ -0.35
TNIP1-204ENST00000517504 NUP160Q12769 1436 aa12.88□□□□□ -0.35
TNIP1-204ENST00000517504 SHROOM2Q13796 1616 aa12.87□□□□□ -0.35
TNIP1-204ENST00000517504 CYB5RLQ6IPT4 315 aa12.86□□□□□ -0.35
TNIP1-204ENST00000517504 ERCC6L2Q5T890 1561 aa12.84□□□□□ -0.35
TNIP1-204ENST00000517504 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
TNIP1-204ENST00000517504 RUSC2Q8N2Y8 1516 aa12.82□□□□□ -0.36
TNIP1-204ENST00000517504 CUL7Q14999 1698 aa12.81□□□□□ -0.36
TNIP1-204ENST00000517504 KIF27Q86VH2 1401 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms