RNA–Protein interactions for RNA: ENST00000517358.1

HAVCR2-202, Transcript of hepatitis A virus cellular receptor 2, humanhuman

TSL 4

Gene HAVCR2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HAVCR2-202ENST00000517358 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
HAVCR2-202ENST00000517358 ABCC9O60706 1549 aa22.31■■□□□ 1.16
HAVCR2-202ENST00000517358 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
HAVCR2-202ENST00000517358 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.98
HAVCR2-202ENST00000517358 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
HAVCR2-202ENST00000517358 NACADO15069 1562 aa20.94■□□□□ 0.94
HAVCR2-202ENST00000517358 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
HAVCR2-202ENST00000517358 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
HAVCR2-202ENST00000517358 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
HAVCR2-202ENST00000517358 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
HAVCR2-202ENST00000517358 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
HAVCR2-202ENST00000517358 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
HAVCR2-202ENST00000517358 SCRIBQ14160 1630 aa20.27■□□□□ 0.83
HAVCR2-202ENST00000517358 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
HAVCR2-202ENST00000517358 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
HAVCR2-202ENST00000517358 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
HAVCR2-202ENST00000517358 CECR2Q9BXF3 1484 aa20.07■□□□□ 0.8
HAVCR2-202ENST00000517358 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
HAVCR2-202ENST00000517358 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
HAVCR2-202ENST00000517358 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
HAVCR2-202ENST00000517358 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
HAVCR2-202ENST00000517358 DNAJC5Q9H3Z4 198 aa19.27■□□□□ 0.68
HAVCR2-202ENST00000517358 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
HAVCR2-202ENST00000517358 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
HAVCR2-202ENST00000517358 CUX2O14529 1486 aa19.18■□□□□ 0.66
HAVCR2-202ENST00000517358 HMGXB3Q12766 1538 aa19.17■□□□□ 0.66
HAVCR2-202ENST00000517358 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
HAVCR2-202ENST00000517358 BAZ1BQ9UIG0 1483 aaKnown RBP19.14■□□□□ 0.65
HAVCR2-202ENST00000517358 NESP48681 1621 aa19.12■□□□□ 0.65
HAVCR2-202ENST00000517358 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
HAVCR2-202ENST00000517358 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
HAVCR2-202ENST00000517358 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
HAVCR2-202ENST00000517358 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.61
HAVCR2-202ENST00000517358 KIF21AQ7Z4S6 1674 aa18.87■□□□□ 0.61
HAVCR2-202ENST00000517358 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
HAVCR2-202ENST00000517358 WIZO95785 1651 aa18.8■□□□□ 0.6
HAVCR2-202ENST00000517358 CADPSQ9ULU8 1353 aa18.77■□□□□ 0.6
HAVCR2-202ENST00000517358 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
HAVCR2-202ENST00000517358 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
HAVCR2-202ENST00000517358 WDR62O43379 1518 aa18.61■□□□□ 0.57
HAVCR2-202ENST00000517358 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.57
HAVCR2-202ENST00000517358 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
HAVCR2-202ENST00000517358 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
HAVCR2-202ENST00000517358 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
HAVCR2-202ENST00000517358 CFTRP13569 1480 aa18.51■□□□□ 0.55
HAVCR2-202ENST00000517358 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
HAVCR2-202ENST00000517358 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
HAVCR2-202ENST00000517358 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
HAVCR2-202ENST00000517358 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
HAVCR2-202ENST00000517358 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
HAVCR2-202ENST00000517358 ZNF608Q9ULD9 1512 aaPredicted RBP18.22■□□□□ 0.51
HAVCR2-202ENST00000517358 TOPBP1Q92547 1522 aa18.21■□□□□ 0.51
HAVCR2-202ENST00000517358 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
HAVCR2-202ENST00000517358 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
HAVCR2-202ENST00000517358 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
HAVCR2-202ENST00000517358 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
HAVCR2-202ENST00000517358 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
HAVCR2-202ENST00000517358 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
HAVCR2-202ENST00000517358 FBLN2P98095 1184 aa18.08■□□□□ 0.48
HAVCR2-202ENST00000517358 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.48
HAVCR2-202ENST00000517358 ARHGEF11O15085 1522 aa18.03■□□□□ 0.48
HAVCR2-202ENST00000517358 CHD1O14646 1710 aa18.02■□□□□ 0.48
HAVCR2-202ENST00000517358 TARBP1Q13395 1621 aaKnown RBP18.01■□□□□ 0.47
HAVCR2-202ENST00000517358 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
HAVCR2-202ENST00000517358 CYB5RLQ6IPT4 315 aa17.99■□□□□ 0.47
HAVCR2-202ENST00000517358 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
HAVCR2-202ENST00000517358 SOGA1O94964 1423 aa17.97■□□□□ 0.47
HAVCR2-202ENST00000517358 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
HAVCR2-202ENST00000517358 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
HAVCR2-202ENST00000517358 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
HAVCR2-202ENST00000517358 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
HAVCR2-202ENST00000517358 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
HAVCR2-202ENST00000517358 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
HAVCR2-202ENST00000517358 CUX1P39880 1505 aa17.86■□□□□ 0.45
HAVCR2-202ENST00000517358 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
HAVCR2-202ENST00000517358 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
HAVCR2-202ENST00000517358 GRIN2BQ13224 1484 aa17.8■□□□□ 0.44
HAVCR2-202ENST00000517358 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
HAVCR2-202ENST00000517358 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
HAVCR2-202ENST00000517358 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
HAVCR2-202ENST00000517358 CLASP1Q7Z460 1538 aa17.74■□□□□ 0.43
HAVCR2-202ENST00000517358 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
HAVCR2-202ENST00000517358 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
HAVCR2-202ENST00000517358 ABCA10Q8WWZ4 1543 aa17.66■□□□□ 0.42
HAVCR2-202ENST00000517358 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
HAVCR2-202ENST00000517358 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
HAVCR2-202ENST00000517358 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
HAVCR2-202ENST00000517358 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
HAVCR2-202ENST00000517358 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
HAVCR2-202ENST00000517358 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
HAVCR2-202ENST00000517358 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
HAVCR2-202ENST00000517358 ERCC6L2Q5T890 1561 aa17.5■□□□□ 0.39
HAVCR2-202ENST00000517358 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
HAVCR2-202ENST00000517358 NUP160Q12769 1436 aa17.47■□□□□ 0.39
HAVCR2-202ENST00000517358 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
HAVCR2-202ENST00000517358 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
HAVCR2-202ENST00000517358 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
HAVCR2-202ENST00000517358 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
HAVCR2-202ENST00000517358 JPH4Q96JJ6 628 aa17.36■□□□□ 0.37
HAVCR2-202ENST00000517358 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms