RNA–Protein interactions for RNA: ENST00000517310.5

EFCAB13-202, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,477 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-202ENST00000517310 NISCHQ9Y2I1 1504 aa51.28■■■■■ 5.8
EFCAB13-202ENST00000517310 CCDC180Q9P1Z9 1646 aa45.14■■■■■ 4.82
EFCAB13-202ENST00000517310 ABCC9O60706 1549 aa43.16■■■■■ 4.5
EFCAB13-202ENST00000517310 ZCCHC6Q5VYS8 1495 aaKnown RBP42.94■■■■■ 4.46
EFCAB13-202ENST00000517310 DCAF1Q9Y4B6 1507 aa42.49■■■■■ 4.39
EFCAB13-202ENST00000517310 DCAF8L2P0C7V8 631 aa42.38■■■■■ 4.38
EFCAB13-202ENST00000517310 MYO15BQ96JP2 1530 aa42.29■■■■■ 4.36
EFCAB13-202ENST00000517310 NACADO15069 1562 aa42.19■■■■■ 4.34
EFCAB13-202ENST00000517310 RB1CC1Q8TDY2 1594 aa41.97■■■■■ 4.31
EFCAB13-202ENST00000517310 SCRIBQ14160 1630 aa41.26■■■■■ 4.2
EFCAB13-202ENST00000517310 SHROOM4Q9ULL8 1493 aa41.12■■■■■ 4.17
EFCAB13-202ENST00000517310 UNC13AQ9UPW8 1703 aa41.08■■■■■ 4.17
EFCAB13-202ENST00000517310 BICRAQ9NZM4 1560 aa40.7■■■■■ 4.11
EFCAB13-202ENST00000517310 PABPN1Q86U42 306 aaKnown RBP eCLIP40.5■■■■■ 4.07
EFCAB13-202ENST00000517310 CECR2Q9BXF3 1484 aa39.83■■■■□ 3.97
EFCAB13-202ENST00000517310 BAZ1AQ9NRL2 1556 aaPredicted RBP39.67■■■■□ 3.94
EFCAB13-202ENST00000517310 SMARCA4P51532 1647 aa39.57■■■■□ 3.93
EFCAB13-202ENST00000517310 MROH2BQ7Z745 1585 aa39.54■■■■□ 3.92
EFCAB13-202ENST00000517310 EIF4G1Q04637 1599 aaKnown RBP39.53■■■■□ 3.92
EFCAB13-202ENST00000517310 RSF1Q96T23 1441 aaPredicted RBP39.46■■■■□ 3.91
EFCAB13-202ENST00000517310 SUPT5HO00267 1087 aaKnown RBP39.2■■■■□ 3.87
EFCAB13-202ENST00000517310 PEG3Q9GZU2 1588 aa39.19■■■■□ 3.86
EFCAB13-202ENST00000517310 WIZO95785 1651 aa39.18■■■■□ 3.86
EFCAB13-202ENST00000517310 CC2D2AQ9P2K1 1620 aa39.11■■■■□ 3.85
EFCAB13-202ENST00000517310 ATAD2BQ9ULI0 1458 aa39.09■■■■□ 3.85
EFCAB13-202ENST00000517310 SMARCA2P51531 1590 aa39.09■■■■□ 3.85
EFCAB13-202ENST00000517310 NCAPD3P42695 1498 aa38.91■■■■□ 3.82
EFCAB13-202ENST00000517310 BAZ1BQ9UIG0 1483 aaKnown RBP38.82■■■■□ 3.81
EFCAB13-202ENST00000517310 HMGXB3Q12766 1538 aa38.82■■■■□ 3.81
EFCAB13-202ENST00000517310 TOP2AP11388 1531 aaKnown RBP38.82■■■■□ 3.8
EFCAB13-202ENST00000517310 DNAJC5BQ9UF47 199 aa38.69■■■■□ 3.78
EFCAB13-202ENST00000517310 CCDC88BA6NC98 1476 aa38.35■■■■□ 3.73
EFCAB13-202ENST00000517310 CADPSQ9ULU8 1353 aa37.83■■■■□ 3.65
EFCAB13-202ENST00000517310 CFTRP13569 1480 aa37.83■■■■□ 3.65
EFCAB13-202ENST00000517310 LAMC3Q9Y6N6 1575 aa37.72■■■■□ 3.63
EFCAB13-202ENST00000517310 NESP48681 1621 aa37.67■■■■□ 3.62
EFCAB13-202ENST00000517310 PRDM2Q13029 1718 aa37.66■■■■□ 3.62
EFCAB13-202ENST00000517310 PDS5BQ9NTI5 1447 aa37.43■■■■□ 3.58
EFCAB13-202ENST00000517310 FANCD2Q9BXW9 1451 aa37.4■■■■□ 3.58
EFCAB13-202ENST00000517310 ABCC8Q09428 1581 aa37.27■■■■□ 3.56
EFCAB13-202ENST00000517310 KIF21AQ7Z4S6 1674 aa37.27■■■■□ 3.56
EFCAB13-202ENST00000517310 CEP164Q9UPV0 1460 aa37.25■■■■□ 3.55
EFCAB13-202ENST00000517310 CHIC1Q5VXU3 224 aa37.22■■■■□ 3.55
EFCAB13-202ENST00000517310 WRNQ14191 1432 aaPredicted RBP eCLIP37.16■■■■□ 3.54
EFCAB13-202ENST00000517310 ERCC6Q03468 1493 aa37.11■■■■□ 3.53
EFCAB13-202ENST00000517310 SYNJ1O43426 1573 aa37.04■■■■□ 3.52
EFCAB13-202ENST00000517310 CUX1P39880 1505 aa37.03■■■■□ 3.52
EFCAB13-202ENST00000517310 TOP2BQ02880 1626 aa36.99■■■■□ 3.51
EFCAB13-202ENST00000517310 BIVM-ERCC5R4GMW8 1640 aa36.99■■■■□ 3.51
EFCAB13-202ENST00000517310 TRIM41Q8WV44 630 aa36.99■■■■□ 3.51
EFCAB13-202ENST00000517310 MRC2Q9UBG0 1479 aa36.99■■■■□ 3.51
EFCAB13-202ENST00000517310 DNMBPQ6XZF7 1577 aa36.98■■■■□ 3.51
EFCAB13-202ENST00000517310 URB2Q14146 1524 aaKnown RBP36.97■■■■□ 3.51
EFCAB13-202ENST00000517310 TOPBP1Q92547 1522 aa36.92■■■■□ 3.5
EFCAB13-202ENST00000517310 THOC2Q8NI27 1593 aaKnown RBP36.89■■■■□ 3.5
EFCAB13-202ENST00000517310 WDR62O43379 1518 aa36.84■■■■□ 3.49
EFCAB13-202ENST00000517310 FGD5Q6ZNL6 1462 aa36.74■■■■□ 3.47
EFCAB13-202ENST00000517310 POLA1P09884 1462 aaPredicted RBP36.68■■■■□ 3.46
EFCAB13-202ENST00000517310 SOGA1O94964 1423 aa36.54■■■■□ 3.44
EFCAB13-202ENST00000517310 CUX2O14529 1486 aa36.52■■■■□ 3.44
EFCAB13-202ENST00000517310 RAD54L2Q9Y4B4 1467 aa36.51■■■■□ 3.43
EFCAB13-202ENST00000517310 TARBP1Q13395 1621 aaKnown RBP36.45■■■■□ 3.43
EFCAB13-202ENST00000517310 ABCA10Q8WWZ4 1543 aa36.45■■■■□ 3.42
EFCAB13-202ENST00000517310 IFT140Q96RY7 1462 aa36.43■■■■□ 3.42
EFCAB13-202ENST00000517310 WDR97A6NE52 1622 aa36.41■■■■□ 3.42
EFCAB13-202ENST00000517310 RUSC2Q8N2Y8 1516 aa36.31■■■■□ 3.4
EFCAB13-202ENST00000517310 EEA1Q15075 1411 aa36.3■■■■□ 3.4
EFCAB13-202ENST00000517310 KIF27Q86VH2 1401 aa36.3■■■■□ 3.4
EFCAB13-202ENST00000517310 ABCA5Q8WWZ7 1642 aa36.21■■■■□ 3.39
EFCAB13-202ENST00000517310 TDRD9Q8NDG6 1382 aaKnown RBP36.2■■■■□ 3.39
EFCAB13-202ENST00000517310 ZNF608Q9ULD9 1512 aaPredicted RBP36.19■■■■□ 3.38
EFCAB13-202ENST00000517310 FAM9AQ8IZU1 332 aaPredicted RBP36.18■■■■□ 3.38
EFCAB13-202ENST00000517310 GAPVD1Q14C86 1478 aa36.13■■■■□ 3.38
EFCAB13-202ENST00000517310 AQRO60306 1485 aaKnown RBP eCLIP36.1■■■■□ 3.37
EFCAB13-202ENST00000517310 CSRNP3Q8WYN3 585 aa36.1■■■■□ 3.37
EFCAB13-202ENST00000517310 EIF4G3O43432 1585 aaKnown RBP36.09■■■■□ 3.37
EFCAB13-202ENST00000517310 IGF1RP08069 1367 aa36.04■■■■□ 3.36
EFCAB13-202ENST00000517310 ERICH3Q5RHP9 1530 aa36.02■■■■□ 3.36
EFCAB13-202ENST00000517310 PBRM1Q86U86 1689 aa36.02■■■■□ 3.36
EFCAB13-202ENST00000517310 GRIN2BQ13224 1484 aa35.99■■■■□ 3.35
EFCAB13-202ENST00000517310 PRXQ9BXM0 1461 aa35.9■■■■□ 3.34
EFCAB13-202ENST00000517310 CUL7Q14999 1698 aa35.89■■■■□ 3.34
EFCAB13-202ENST00000517310 KIF21BO75037 1637 aa35.86■■■■□ 3.33
EFCAB13-202ENST00000517310 CARMIL1Q5VZK9 1371 aa35.84■■■■□ 3.33
EFCAB13-202ENST00000517310 SNAPC4Q5SXM2 1469 aa35.81■■■■□ 3.32
EFCAB13-202ENST00000517310 MAGI1Q96QZ7 1491 aaPredicted RBP35.79■■■■□ 3.32
EFCAB13-202ENST00000517310 ADAMTS12P58397 1594 aa35.79■■■■□ 3.32
EFCAB13-202ENST00000517310 FHAD1B1AJZ9 1412 aa35.76■■■■□ 3.31
EFCAB13-202ENST00000517310 RAPGEF2Q9Y4G8 1499 aa35.75■■■■□ 3.31
EFCAB13-202ENST00000517310 GOLGA3Q08378 1498 aa35.72■■■■□ 3.31
EFCAB13-202ENST00000517310 LOC105371045A0A1W2PR82 267 aa35.69■■■■□ 3.3
EFCAB13-202ENST00000517310 SYNJ2O15056 1496 aa35.63■■■■□ 3.29
EFCAB13-202ENST00000517310 EHMT2Q96KQ7 1210 aa35.62■■■■□ 3.29
EFCAB13-202ENST00000517310 GRIN2AQ12879 1464 aa35.53■■■■□ 3.28
EFCAB13-202ENST00000517310 CHMP7Q8WUX9 453 aaPredicted RBP35.52■■■■□ 3.28
EFCAB13-202ENST00000517310 UBTFP17480 764 aaKnown RBP35.51■■■■□ 3.28
EFCAB13-202ENST00000517310 TNIKQ9UKE5 1360 aa35.48■■■■□ 3.27
EFCAB13-202ENST00000517310 CHD1O14646 1710 aa35.45■■■■□ 3.26
EFCAB13-202ENST00000517310 FBLN2P98095 1184 aa35.44■■■■□ 3.26
EFCAB13-202ENST00000517310 CTTNBP2Q8WZ74 1663 aa35.37■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms