RNA–Protein interactions for RNA: ENST00000516815.1

RNA5SP409-201, Transcript of RNA, 5S ribosomal pseudogene 409, humanhuman

BASIC

Gene RNA5SP409, Length 109 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP409-201ENST00000516815 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
RNA5SP409-201ENST00000516815 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
RNA5SP409-201ENST00000516815 ZCCHC6Q5VYS8 1495 aaKnown RBP19.17■□□□□ 0.66
RNA5SP409-201ENST00000516815 ABCC9O60706 1549 aa19.16■□□□□ 0.66
RNA5SP409-201ENST00000516815 DCAF1Q9Y4B6 1507 aa18.96■□□□□ 0.63
RNA5SP409-201ENST00000516815 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
RNA5SP409-201ENST00000516815 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
RNA5SP409-201ENST00000516815 NACADO15069 1562 aa18.79■□□□□ 0.6
RNA5SP409-201ENST00000516815 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
RNA5SP409-201ENST00000516815 SCRIBQ14160 1630 aa18.4■□□□□ 0.54
RNA5SP409-201ENST00000516815 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
RNA5SP409-201ENST00000516815 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
RNA5SP409-201ENST00000516815 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
RNA5SP409-201ENST00000516815 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
RNA5SP409-201ENST00000516815 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
RNA5SP409-201ENST00000516815 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
RNA5SP409-201ENST00000516815 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
RNA5SP409-201ENST00000516815 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
RNA5SP409-201ENST00000516815 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
RNA5SP409-201ENST00000516815 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.41
RNA5SP409-201ENST00000516815 SUPT5HO00267 1087 aaKnown RBP17.51■□□□□ 0.39
RNA5SP409-201ENST00000516815 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
RNA5SP409-201ENST00000516815 WIZO95785 1651 aa17.47■□□□□ 0.39
RNA5SP409-201ENST00000516815 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
RNA5SP409-201ENST00000516815 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
RNA5SP409-201ENST00000516815 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
RNA5SP409-201ENST00000516815 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.37
RNA5SP409-201ENST00000516815 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
RNA5SP409-201ENST00000516815 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
RNA5SP409-201ENST00000516815 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
RNA5SP409-201ENST00000516815 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
RNA5SP409-201ENST00000516815 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
RNA5SP409-201ENST00000516815 CFTRP13569 1480 aa16.85■□□□□ 0.29
RNA5SP409-201ENST00000516815 CADPSQ9ULU8 1353 aa16.84■□□□□ 0.29
RNA5SP409-201ENST00000516815 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
RNA5SP409-201ENST00000516815 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
RNA5SP409-201ENST00000516815 NESP48681 1621 aa16.74■□□□□ 0.27
RNA5SP409-201ENST00000516815 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
RNA5SP409-201ENST00000516815 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
RNA5SP409-201ENST00000516815 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
RNA5SP409-201ENST00000516815 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
RNA5SP409-201ENST00000516815 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
RNA5SP409-201ENST00000516815 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
RNA5SP409-201ENST00000516815 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
RNA5SP409-201ENST00000516815 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
RNA5SP409-201ENST00000516815 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.24
RNA5SP409-201ENST00000516815 CUX1P39880 1505 aa16.52■□□□□ 0.24
RNA5SP409-201ENST00000516815 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
RNA5SP409-201ENST00000516815 TOP2BQ02880 1626 aa16.52■□□□□ 0.23
RNA5SP409-201ENST00000516815 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
RNA5SP409-201ENST00000516815 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
RNA5SP409-201ENST00000516815 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
RNA5SP409-201ENST00000516815 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
RNA5SP409-201ENST00000516815 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
RNA5SP409-201ENST00000516815 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
RNA5SP409-201ENST00000516815 WDR62O43379 1518 aa16.4■□□□□ 0.22
RNA5SP409-201ENST00000516815 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
RNA5SP409-201ENST00000516815 POLA1P09884 1462 aaPredicted RBP16.34■□□□□ 0.21
RNA5SP409-201ENST00000516815 SOGA1O94964 1423 aa16.27■□□□□ 0.19
RNA5SP409-201ENST00000516815 RAD54L2Q9Y4B4 1467 aa16.25■□□□□ 0.19
RNA5SP409-201ENST00000516815 EEA1Q15075 1411 aa16.25■□□□□ 0.19
RNA5SP409-201ENST00000516815 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
RNA5SP409-201ENST00000516815 CUX2O14529 1486 aa16.24■□□□□ 0.19
RNA5SP409-201ENST00000516815 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
RNA5SP409-201ENST00000516815 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
RNA5SP409-201ENST00000516815 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
RNA5SP409-201ENST00000516815 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.19
RNA5SP409-201ENST00000516815 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
RNA5SP409-201ENST00000516815 FAM9AQ8IZU1 332 aaPredicted RBP16.16■□□□□ 0.18
RNA5SP409-201ENST00000516815 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
RNA5SP409-201ENST00000516815 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
RNA5SP409-201ENST00000516815 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
RNA5SP409-201ENST00000516815 TDRD9Q8NDG6 1382 aaKnown RBP16.1■□□□□ 0.17
RNA5SP409-201ENST00000516815 ZNF608Q9ULD9 1512 aaPredicted RBP16.09■□□□□ 0.17
RNA5SP409-201ENST00000516815 ERICH3Q5RHP9 1530 aa16.07■□□□□ 0.16
RNA5SP409-201ENST00000516815 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
RNA5SP409-201ENST00000516815 PBRM1Q86U86 1689 aa16.06■□□□□ 0.16
RNA5SP409-201ENST00000516815 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.16
RNA5SP409-201ENST00000516815 IGF1RP08069 1367 aa16.06■□□□□ 0.16
RNA5SP409-201ENST00000516815 KIF21BO75037 1637 aa16.05■□□□□ 0.16
RNA5SP409-201ENST00000516815 CUL7Q14999 1698 aa16.03■□□□□ 0.16
RNA5SP409-201ENST00000516815 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
RNA5SP409-201ENST00000516815 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
RNA5SP409-201ENST00000516815 GOLGA3Q08378 1498 aa15.99■□□□□ 0.15
RNA5SP409-201ENST00000516815 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
RNA5SP409-201ENST00000516815 LOC105371045A0A1W2PR82 267 aa15.97■□□□□ 0.15
RNA5SP409-201ENST00000516815 ADAMTS12P58397 1594 aa15.96■□□□□ 0.15
RNA5SP409-201ENST00000516815 RAPGEF2Q9Y4G8 1499 aa15.96■□□□□ 0.14
RNA5SP409-201ENST00000516815 SNAPC4Q5SXM2 1469 aa15.94■□□□□ 0.14
RNA5SP409-201ENST00000516815 MAGI1Q96QZ7 1491 aaPredicted RBP15.94■□□□□ 0.14
RNA5SP409-201ENST00000516815 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
RNA5SP409-201ENST00000516815 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
RNA5SP409-201ENST00000516815 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
RNA5SP409-201ENST00000516815 SYNJ2O15056 1496 aa15.86■□□□□ 0.13
RNA5SP409-201ENST00000516815 UBTFP17480 764 aaKnown RBP15.86■□□□□ 0.13
RNA5SP409-201ENST00000516815 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
RNA5SP409-201ENST00000516815 CTTNBP2Q8WZ74 1663 aa15.8■□□□□ 0.12
RNA5SP409-201ENST00000516815 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
RNA5SP409-201ENST00000516815 CHD1O14646 1710 aa15.77■□□□□ 0.12
RNA5SP409-201ENST00000516815 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms