RNA–Protein interactions for RNA: ENST00000516681.1

RN7SKP66-201, Transcript of RNA, 7SK small nuclear pseudogene 66, humanhuman

BASIC

Gene RN7SKP66, Length 231 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP66-201ENST00000516681 NISCHQ9Y2I1 1504 aa13.08□□□□□ -0.31
RN7SKP66-201ENST00000516681 ABCC9O60706 1549 aa12.38□□□□□ -0.43
RN7SKP66-201ENST00000516681 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.49
RN7SKP66-201ENST00000516681 CCDC180Q9P1Z9 1646 aa11.92□□□□□ -0.5
RN7SKP66-201ENST00000516681 RB1CC1Q8TDY2 1594 aa11.6□□□□□ -0.55
RN7SKP66-201ENST00000516681 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
RN7SKP66-201ENST00000516681 DNAJC5Q9H3Z4 198 aa11.42□□□□□ -0.58
RN7SKP66-201ENST00000516681 NACADO15069 1562 aa11.41□□□□□ -0.58
RN7SKP66-201ENST00000516681 DCAF8L2P0C7V8 631 aa11.3□□□□□ -0.6
RN7SKP66-201ENST00000516681 UNC13AQ9UPW8 1703 aa11.26□□□□□ -0.61
RN7SKP66-201ENST00000516681 BICRAQ9NZM4 1560 aa11.23□□□□□ -0.61
RN7SKP66-201ENST00000516681 CECR2Q9BXF3 1484 aa11.22□□□□□ -0.61
RN7SKP66-201ENST00000516681 CC2D2AQ9P2K1 1620 aa11.15□□□□□ -0.62
RN7SKP66-201ENST00000516681 MYO15BQ96JP2 1530 aa11.11□□□□□ -0.63
RN7SKP66-201ENST00000516681 SHROOM4Q9ULL8 1493 aa11.1□□□□□ -0.63
RN7SKP66-201ENST00000516681 EIF4G1Q04637 1599 aaKnown RBP11.02□□□□□ -0.65
RN7SKP66-201ENST00000516681 CUX2O14529 1486 aa10.88□□□□□ -0.67
RN7SKP66-201ENST00000516681 SCRIBQ14160 1630 aa10.82□□□□□ -0.68
RN7SKP66-201ENST00000516681 DCAF1Q9Y4B6 1507 aa10.79□□□□□ -0.68
RN7SKP66-201ENST00000516681 ERCC6Q03468 1493 aa10.75□□□□□ -0.69
RN7SKP66-201ENST00000516681 ZCCHC6Q5VYS8 1495 aaKnown RBP10.73□□□□□ -0.69
RN7SKP66-201ENST00000516681 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
RN7SKP66-201ENST00000516681 AEBP2Q6ZN18 517 aaPredicted RBP10.61□□□□□ -0.71
RN7SKP66-201ENST00000516681 NCAPD3P42695 1498 aa10.55□□□□□ -0.72
RN7SKP66-201ENST00000516681 NESP48681 1621 aa10.48□□□□□ -0.73
RN7SKP66-201ENST00000516681 THOC2Q8NI27 1593 aaKnown RBP10.46□□□□□ -0.74
RN7SKP66-201ENST00000516681 ATAD2BQ9ULI0 1458 aa10.43□□□□□ -0.74
RN7SKP66-201ENST00000516681 HMGXB3Q12766 1538 aa10.4□□□□□ -0.74
RN7SKP66-201ENST00000516681 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
RN7SKP66-201ENST00000516681 LAMC3Q9Y6N6 1575 aa10.37□□□□□ -0.75
RN7SKP66-201ENST00000516681 PDS5BQ9NTI5 1447 aa10.36□□□□□ -0.75
RN7SKP66-201ENST00000516681 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
RN7SKP66-201ENST00000516681 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
RN7SKP66-201ENST00000516681 BAZ1BQ9UIG0 1483 aaKnown RBP10.31□□□□□ -0.76
RN7SKP66-201ENST00000516681 BAZ1AQ9NRL2 1556 aaPredicted RBP10.3□□□□□ -0.76
RN7SKP66-201ENST00000516681 SMARCA4P51532 1647 aa10.28□□□□□ -0.76
RN7SKP66-201ENST00000516681 MRC2Q9UBG0 1479 aa10.26□□□□□ -0.77
RN7SKP66-201ENST00000516681 WDR62O43379 1518 aa10.23□□□□□ -0.77
RN7SKP66-201ENST00000516681 CHIC1Q5VXU3 224 aa10.22□□□□□ -0.77
RN7SKP66-201ENST00000516681 CADPSQ9ULU8 1353 aa10.22□□□□□ -0.77
RN7SKP66-201ENST00000516681 PEG3Q9GZU2 1588 aa10.2□□□□□ -0.78
RN7SKP66-201ENST00000516681 RIMBP3CA6NJZ7 1639 aa10.19□□□□□ -0.78
RN7SKP66-201ENST00000516681 RIMBP3BA6NNM3 1639 aa10.19□□□□□ -0.78
RN7SKP66-201ENST00000516681 RIMBP3Q9UFD9 1639 aa10.19□□□□□ -0.78
RN7SKP66-201ENST00000516681 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP66-201ENST00000516681 CEP164Q9UPV0 1460 aa10.13□□□□□ -0.79
RN7SKP66-201ENST00000516681 CYB5RLQ6IPT4 315 aa10.13□□□□□ -0.79
RN7SKP66-201ENST00000516681 ARHGEF11O15085 1522 aa10.12□□□□□ -0.79
RN7SKP66-201ENST00000516681 FANCD2Q9BXW9 1451 aa10.08□□□□□ -0.8
RN7SKP66-201ENST00000516681 MROH2BQ7Z745 1585 aa10.05□□□□□ -0.8
RN7SKP66-201ENST00000516681 URB2Q14146 1524 aaKnown RBP10□□□□□ -0.81
RN7SKP66-201ENST00000516681 CFTRP13569 1480 aa9.98□□□□□ -0.81
RN7SKP66-201ENST00000516681 ARAP1Q96P48 1450 aa9.98□□□□□ -0.81
RN7SKP66-201ENST00000516681 IFT140Q96RY7 1462 aa9.96□□□□□ -0.82
RN7SKP66-201ENST00000516681 ZNF608Q9ULD9 1512 aaPredicted RBP9.96□□□□□ -0.82
RN7SKP66-201ENST00000516681 RSF1Q96T23 1441 aaPredicted RBP9.95□□□□□ -0.82
RN7SKP66-201ENST00000516681 WIZO95785 1651 aa9.9□□□□□ -0.82
RN7SKP66-201ENST00000516681 FBLN2P98095 1184 aa9.9□□□□□ -0.82
RN7SKP66-201ENST00000516681 EIF4G3O43432 1585 aaKnown RBP9.87□□□□□ -0.83
RN7SKP66-201ENST00000516681 CHD1O14646 1710 aa9.87□□□□□ -0.83
RN7SKP66-201ENST00000516681 ILDR1Q86SU0 546 aaPredicted RBP9.83□□□□□ -0.84
RN7SKP66-201ENST00000516681 AQRO60306 1485 aaKnown RBP eCLIP9.83□□□□□ -0.84
RN7SKP66-201ENST00000516681 ABCC8Q09428 1581 aa9.83□□□□□ -0.84
RN7SKP66-201ENST00000516681 TOPBP1Q92547 1522 aa9.82□□□□□ -0.84
RN7SKP66-201ENST00000516681 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
RN7SKP66-201ENST00000516681 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.85
RN7SKP66-201ENST00000516681 CLASP1Q7Z460 1538 aa9.77□□□□□ -0.85
RN7SKP66-201ENST00000516681 CHMP7Q8WUX9 453 aaPredicted RBP9.76□□□□□ -0.85
RN7SKP66-201ENST00000516681 TARBP1Q13395 1621 aaKnown RBP9.75□□□□□ -0.85
RN7SKP66-201ENST00000516681 SYNJ1O43426 1573 aa9.75□□□□□ -0.85
RN7SKP66-201ENST00000516681 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
RN7SKP66-201ENST00000516681 GAPVD1Q14C86 1478 aa9.72□□□□□ -0.85
RN7SKP66-201ENST00000516681 TDRD9Q8NDG6 1382 aaKnown RBP9.7□□□□□ -0.86
RN7SKP66-201ENST00000516681 SNAPC4Q5SXM2 1469 aa9.7□□□□□ -0.86
RN7SKP66-201ENST00000516681 POLA1P09884 1462 aaPredicted RBP9.69□□□□□ -0.86
RN7SKP66-201ENST00000516681 MAGI1Q96QZ7 1491 aaPredicted RBP9.68□□□□□ -0.86
RN7SKP66-201ENST00000516681 CCDC88BA6NC98 1476 aa9.67□□□□□ -0.86
RN7SKP66-201ENST00000516681 SOGA1O94964 1423 aa9.67□□□□□ -0.86
RN7SKP66-201ENST00000516681 RAD54L2Q9Y4B4 1467 aa9.66□□□□□ -0.86
RN7SKP66-201ENST00000516681 WDR97A6NE52 1622 aa9.66□□□□□ -0.86
RN7SKP66-201ENST00000516681 SYNJ2O15056 1496 aa9.66□□□□□ -0.86
RN7SKP66-201ENST00000516681 KDM4FA0A1W2PPD8 638 aa9.64□□□□□ -0.87
RN7SKP66-201ENST00000516681 GRIN2BQ13224 1484 aa9.64□□□□□ -0.87
RN7SKP66-201ENST00000516681 KIF13AQ9H1H9 1805 aa9.59□□□□□ -0.88
RN7SKP66-201ENST00000516681 FAM69CQ0P6D2 419 aa9.57□□□□□ -0.88
RN7SKP66-201ENST00000516681 FGD5Q6ZNL6 1462 aa9.57□□□□□ -0.88
RN7SKP66-201ENST00000516681 ERCC6L2Q5T890 1561 aa9.55□□□□□ -0.88
RN7SKP66-201ENST00000516681 NPM1P06748 294 aaKnown RBP eCLIP9.53□□□□□ -0.88
RN7SKP66-201ENST00000516681 ABCC10Q5T3U5 1492 aa9.53□□□□□ -0.88
RN7SKP66-201ENST00000516681 CEP170Q5SW79 1584 aa9.52□□□□□ -0.89
RN7SKP66-201ENST00000516681 KDM6BO15054 1643 aa9.52□□□□□ -0.89
RN7SKP66-201ENST00000516681 PBRM1Q86U86 1689 aa9.51□□□□□ -0.89
RN7SKP66-201ENST00000516681 GRIN2AQ12879 1464 aa9.49□□□□□ -0.89
RN7SKP66-201ENST00000516681 NUP160Q12769 1436 aa9.48□□□□□ -0.89
RN7SKP66-201ENST00000516681 CUX1P39880 1505 aa9.47□□□□□ -0.89
RN7SKP66-201ENST00000516681 SHROOM2Q13796 1616 aa9.47□□□□□ -0.89
RN7SKP66-201ENST00000516681 FBXO41Q8TF61 875 aa9.47□□□□□ -0.89
RN7SKP66-201ENST00000516681 MAPKBP1O60336 1514 aa9.46□□□□□ -0.89
RN7SKP66-201ENST00000516681 DIP2BQ9P265 1576 aa9.46□□□□□ -0.9
RN7SKP66-201ENST00000516681 PRG4Q92954 1404 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms