RNA–Protein interactions for RNA: ENST00000515811.1

LINC00575-202, long intergenic non-protein coding RNA 575, humanhuman

TSL 1 (best)

Gene LINC00575, Length 848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575-202ENST00000515811 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
LINC00575-202ENST00000515811 ABCC9O60706 1549 aa14.73□□□□□ -0.05
LINC00575-202ENST00000515811 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
LINC00575-202ENST00000515811 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
LINC00575-202ENST00000515811 DCAF8L2P0C7V8 631 aa13.94□□□□□ -0.18
LINC00575-202ENST00000515811 NACADO15069 1562 aa13.87□□□□□ -0.19
LINC00575-202ENST00000515811 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00575-202ENST00000515811 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
LINC00575-202ENST00000515811 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
LINC00575-202ENST00000515811 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
LINC00575-202ENST00000515811 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
LINC00575-202ENST00000515811 BICRAQ9NZM4 1560 aa13.55□□□□□ -0.24
LINC00575-202ENST00000515811 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
LINC00575-202ENST00000515811 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
LINC00575-202ENST00000515811 SHROOM4Q9ULL8 1493 aa13.33□□□□□ -0.28
LINC00575-202ENST00000515811 CC2D2AQ9P2K1 1620 aa13.27□□□□□ -0.29
LINC00575-202ENST00000515811 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
LINC00575-202ENST00000515811 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
LINC00575-202ENST00000515811 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
LINC00575-202ENST00000515811 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
LINC00575-202ENST00000515811 ATAD2BQ9ULI0 1458 aa12.79□□□□□ -0.36
LINC00575-202ENST00000515811 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
LINC00575-202ENST00000515811 SMARCA2P51531 1590 aa12.76□□□□□ -0.37
LINC00575-202ENST00000515811 BAZ1AQ9NRL2 1556 aaPredicted RBP12.74□□□□□ -0.37
LINC00575-202ENST00000515811 ERCC6Q03468 1493 aa12.73□□□□□ -0.37
LINC00575-202ENST00000515811 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
LINC00575-202ENST00000515811 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.38
LINC00575-202ENST00000515811 MROH2BQ7Z745 1585 aa12.67□□□□□ -0.38
LINC00575-202ENST00000515811 NESP48681 1621 aa12.65□□□□□ -0.38
LINC00575-202ENST00000515811 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
LINC00575-202ENST00000515811 CUX2O14529 1486 aa12.61□□□□□ -0.39
LINC00575-202ENST00000515811 WIZO95785 1651 aa12.54□□□□□ -0.4
LINC00575-202ENST00000515811 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
LINC00575-202ENST00000515811 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
LINC00575-202ENST00000515811 THOC2Q8NI27 1593 aaKnown RBP12.5□□□□□ -0.41
LINC00575-202ENST00000515811 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
LINC00575-202ENST00000515811 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
LINC00575-202ENST00000515811 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
LINC00575-202ENST00000515811 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
LINC00575-202ENST00000515811 MRC2Q9UBG0 1479 aa12.37□□□□□ -0.43
LINC00575-202ENST00000515811 TOP2AP11388 1531 aaKnown RBP12.36□□□□□ -0.43
LINC00575-202ENST00000515811 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
LINC00575-202ENST00000515811 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.44
LINC00575-202ENST00000515811 WDR62O43379 1518 aa12.32□□□□□ -0.44
LINC00575-202ENST00000515811 CFTRP13569 1480 aa12.28□□□□□ -0.44
LINC00575-202ENST00000515811 CHIC1Q5VXU3 224 aa12.28□□□□□ -0.44
LINC00575-202ENST00000515811 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
LINC00575-202ENST00000515811 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.45
LINC00575-202ENST00000515811 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
LINC00575-202ENST00000515811 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
LINC00575-202ENST00000515811 TOPBP1Q92547 1522 aa12.09□□□□□ -0.47
LINC00575-202ENST00000515811 IFT140Q96RY7 1462 aa12.07□□□□□ -0.48
LINC00575-202ENST00000515811 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
LINC00575-202ENST00000515811 DNMBPQ6XZF7 1577 aa12.05□□□□□ -0.48
LINC00575-202ENST00000515811 OSCARQ8IYS5 282 aa12.04□□□□□ -0.48
LINC00575-202ENST00000515811 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
LINC00575-202ENST00000515811 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
LINC00575-202ENST00000515811 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
LINC00575-202ENST00000515811 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00575-202ENST00000515811 POLA1P09884 1462 aaPredicted RBP11.96□□□□□ -0.49
LINC00575-202ENST00000515811 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.5
LINC00575-202ENST00000515811 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
LINC00575-202ENST00000515811 FBLN2P98095 1184 aa11.93□□□□□ -0.5
LINC00575-202ENST00000515811 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
LINC00575-202ENST00000515811 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
LINC00575-202ENST00000515811 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
LINC00575-202ENST00000515811 FGD5Q6ZNL6 1462 aa11.92□□□□□ -0.5
LINC00575-202ENST00000515811 SOGA1O94964 1423 aa11.92□□□□□ -0.5
LINC00575-202ENST00000515811 CHD1O14646 1710 aa11.91□□□□□ -0.5
LINC00575-202ENST00000515811 CUX1P39880 1505 aa11.9□□□□□ -0.5
LINC00575-202ENST00000515811 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
LINC00575-202ENST00000515811 ARHGEF11O15085 1522 aa11.88□□□□□ -0.51
LINC00575-202ENST00000515811 SNAPC4Q5SXM2 1469 aa11.87□□□□□ -0.51
LINC00575-202ENST00000515811 CYB5RLQ6IPT4 315 aa11.81□□□□□ -0.52
LINC00575-202ENST00000515811 WDR97A6NE52 1622 aa11.81□□□□□ -0.52
LINC00575-202ENST00000515811 GRIN2BQ13224 1484 aa11.81□□□□□ -0.52
LINC00575-202ENST00000515811 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
LINC00575-202ENST00000515811 PBRM1Q86U86 1689 aa11.79□□□□□ -0.52
LINC00575-202ENST00000515811 MAGI1Q96QZ7 1491 aaPredicted RBP11.78□□□□□ -0.52
LINC00575-202ENST00000515811 GAPVD1Q14C86 1478 aa11.77□□□□□ -0.52
LINC00575-202ENST00000515811 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
LINC00575-202ENST00000515811 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
LINC00575-202ENST00000515811 SYNJ2O15056 1496 aa11.75□□□□□ -0.53
LINC00575-202ENST00000515811 CLASP1Q7Z460 1538 aa11.75□□□□□ -0.53
LINC00575-202ENST00000515811 ABCA10Q8WWZ4 1543 aa11.75□□□□□ -0.53
LINC00575-202ENST00000515811 ABCA5Q8WWZ7 1642 aa11.74□□□□□ -0.53
LINC00575-202ENST00000515811 WRNQ14191 1432 aaPredicted RBP eCLIP11.72□□□□□ -0.53
LINC00575-202ENST00000515811 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.53
LINC00575-202ENST00000515811 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.53
LINC00575-202ENST00000515811 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
LINC00575-202ENST00000515811 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
LINC00575-202ENST00000515811 GRIN2AQ12879 1464 aa11.65□□□□□ -0.54
LINC00575-202ENST00000515811 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
LINC00575-202ENST00000515811 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
LINC00575-202ENST00000515811 ERCC6L2Q5T890 1561 aa11.61□□□□□ -0.55
LINC00575-202ENST00000515811 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
LINC00575-202ENST00000515811 NUP160Q12769 1436 aa11.58□□□□□ -0.56
LINC00575-202ENST00000515811 SHROOM2Q13796 1616 aa11.52□□□□□ -0.57
LINC00575-202ENST00000515811 PRG4Q92954 1404 aaPredicted RBP11.52□□□□□ -0.57
LINC00575-202ENST00000515811 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms