RNA–Protein interactions for RNA: ENST00000515719.5

CLPTM1L-215, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 382 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-215ENST00000515719 NISCHQ9Y2I1 1504 aa40.69■■■■■ 4.1
CLPTM1L-215ENST00000515719 CCDC180Q9P1Z9 1646 aa36.22■■■■□ 3.39
CLPTM1L-215ENST00000515719 ABCC9O60706 1549 aa35.31■■■■□ 3.24
CLPTM1L-215ENST00000515719 RB1CC1Q8TDY2 1594 aa34.04■■■■□ 3.04
CLPTM1L-215ENST00000515719 NACADO15069 1562 aa34.01■■■■□ 3.03
CLPTM1L-215ENST00000515719 ZCCHC6Q5VYS8 1495 aaKnown RBP33.93■■■■□ 3.02
CLPTM1L-215ENST00000515719 DCAF8L2P0C7V8 631 aa33.91■■■■□ 3.02
CLPTM1L-215ENST00000515719 MYO15BQ96JP2 1530 aa33.83■■■■□ 3.01
CLPTM1L-215ENST00000515719 DCAF1Q9Y4B6 1507 aa33.7■■■□□ 2.99
CLPTM1L-215ENST00000515719 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
CLPTM1L-215ENST00000515719 SCRIBQ14160 1630 aa33■■■□□ 2.87
CLPTM1L-215ENST00000515719 BICRAQ9NZM4 1560 aa32.97■■■□□ 2.87
CLPTM1L-215ENST00000515719 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
CLPTM1L-215ENST00000515719 SHROOM4Q9ULL8 1493 aa32.69■■■□□ 2.82
CLPTM1L-215ENST00000515719 DNAJC5BQ9UF47 199 aa32.27■■■□□ 2.76
CLPTM1L-215ENST00000515719 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
CLPTM1L-215ENST00000515719 CC2D2AQ9P2K1 1620 aa31.96■■■□□ 2.71
CLPTM1L-215ENST00000515719 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
CLPTM1L-215ENST00000515719 SMARCA4P51532 1647 aa31.59■■■□□ 2.65
CLPTM1L-215ENST00000515719 BAZ1AQ9NRL2 1556 aaPredicted RBP31.56■■■□□ 2.64
CLPTM1L-215ENST00000515719 SMARCA2P51531 1590 aa31.38■■■□□ 2.61
CLPTM1L-215ENST00000515719 ATAD2BQ9ULI0 1458 aa31.37■■■□□ 2.61
CLPTM1L-215ENST00000515719 NCAPD3P42695 1498 aa31.35■■■□□ 2.61
CLPTM1L-215ENST00000515719 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
CLPTM1L-215ENST00000515719 PEG3Q9GZU2 1588 aa31.28■■■□□ 2.6
CLPTM1L-215ENST00000515719 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
CLPTM1L-215ENST00000515719 BAZ1BQ9UIG0 1483 aaKnown RBP31.14■■■□□ 2.58
CLPTM1L-215ENST00000515719 WIZO95785 1651 aa31.03■■■□□ 2.56
CLPTM1L-215ENST00000515719 RSF1Q96T23 1441 aaPredicted RBP31■■■□□ 2.55
CLPTM1L-215ENST00000515719 TOP2AP11388 1531 aaKnown RBP30.73■■■□□ 2.51
CLPTM1L-215ENST00000515719 NESP48681 1621 aa30.55■■■□□ 2.48
CLPTM1L-215ENST00000515719 LAMC3Q9Y6N6 1575 aa30.55■■■□□ 2.48
CLPTM1L-215ENST00000515719 ERCC6Q03468 1493 aa30.45■■■□□ 2.47
CLPTM1L-215ENST00000515719 CADPSQ9ULU8 1353 aa30.43■■■□□ 2.46
CLPTM1L-215ENST00000515719 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
CLPTM1L-215ENST00000515719 PDS5BQ9NTI5 1447 aa30.31■■■□□ 2.44
CLPTM1L-215ENST00000515719 CFTRP13569 1480 aa30.28■■■□□ 2.44
CLPTM1L-215ENST00000515719 KIF21AQ7Z4S6 1674 aa30.25■■■□□ 2.43
CLPTM1L-215ENST00000515719 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
CLPTM1L-215ENST00000515719 THOC2Q8NI27 1593 aaKnown RBP30.14■■■□□ 2.42
CLPTM1L-215ENST00000515719 CUX2O14529 1486 aa30.12■■■□□ 2.41
CLPTM1L-215ENST00000515719 PRDM2Q13029 1718 aa30.12■■■□□ 2.41
CLPTM1L-215ENST00000515719 FANCD2Q9BXW9 1451 aa30.1■■■□□ 2.41
CLPTM1L-215ENST00000515719 CEP164Q9UPV0 1460 aa30.07■■■□□ 2.4
CLPTM1L-215ENST00000515719 MRC2Q9UBG0 1479 aa30.01■■■□□ 2.4
CLPTM1L-215ENST00000515719 WDR62O43379 1518 aa29.92■■■□□ 2.38
CLPTM1L-215ENST00000515719 URB2Q14146 1524 aaKnown RBP29.78■■■□□ 2.36
CLPTM1L-215ENST00000515719 ABCC8Q09428 1581 aa29.65■■■□□ 2.34
CLPTM1L-215ENST00000515719 TOPBP1Q92547 1522 aa29.62■■■□□ 2.33
CLPTM1L-215ENST00000515719 DNMBPQ6XZF7 1577 aa29.62■■■□□ 2.33
CLPTM1L-215ENST00000515719 IFT140Q96RY7 1462 aa29.43■■■□□ 2.3
CLPTM1L-215ENST00000515719 CUX1P39880 1505 aa29.41■■■□□ 2.3
CLPTM1L-215ENST00000515719 POLA1P09884 1462 aaPredicted RBP29.38■■■□□ 2.29
CLPTM1L-215ENST00000515719 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
CLPTM1L-215ENST00000515719 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
CLPTM1L-215ENST00000515719 WRNQ14191 1432 aaPredicted RBP eCLIP29.26■■■□□ 2.27
CLPTM1L-215ENST00000515719 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
CLPTM1L-215ENST00000515719 SOGA1O94964 1423 aa29.24■■■□□ 2.27
CLPTM1L-215ENST00000515719 RAD54L2Q9Y4B4 1467 aa29.22■■■□□ 2.27
CLPTM1L-215ENST00000515719 BIVM-ERCC5R4GMW8 1640 aa29.21■■■□□ 2.27
CLPTM1L-215ENST00000515719 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
CLPTM1L-215ENST00000515719 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
CLPTM1L-215ENST00000515719 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
CLPTM1L-215ENST00000515719 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
CLPTM1L-215ENST00000515719 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.25
CLPTM1L-215ENST00000515719 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
CLPTM1L-215ENST00000515719 TDRD9Q8NDG6 1382 aaKnown RBP29.05■■■□□ 2.24
CLPTM1L-215ENST00000515719 ABCA10Q8WWZ4 1543 aa29.04■■■□□ 2.24
CLPTM1L-215ENST00000515719 ABCA5Q8WWZ7 1642 aa28.94■■■□□ 2.22
CLPTM1L-215ENST00000515719 GAPVD1Q14C86 1478 aa28.92■■■□□ 2.22
CLPTM1L-215ENST00000515719 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
CLPTM1L-215ENST00000515719 PBRM1Q86U86 1689 aa28.89■■■□□ 2.22
CLPTM1L-215ENST00000515719 SNAPC4Q5SXM2 1469 aa28.86■■■□□ 2.21
CLPTM1L-215ENST00000515719 MAGI1Q96QZ7 1491 aaPredicted RBP28.85■■■□□ 2.21
CLPTM1L-215ENST00000515719 OSCARQ8IYS5 282 aa28.84■■■□□ 2.21
CLPTM1L-215ENST00000515719 CHD1O14646 1710 aa28.82■■■□□ 2.2
CLPTM1L-215ENST00000515719 FBLN2P98095 1184 aa28.73■■■□□ 2.19
CLPTM1L-215ENST00000515719 SYNJ2O15056 1496 aa28.72■■■□□ 2.19
CLPTM1L-215ENST00000515719 ERICH3Q5RHP9 1530 aa28.7■■■□□ 2.19
CLPTM1L-215ENST00000515719 CHMP7Q8WUX9 453 aaPredicted RBP28.68■■■□□ 2.18
CLPTM1L-215ENST00000515719 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
CLPTM1L-215ENST00000515719 KIF27Q86VH2 1401 aa28.65■■■□□ 2.18
CLPTM1L-215ENST00000515719 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
CLPTM1L-215ENST00000515719 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
CLPTM1L-215ENST00000515719 GRIN2AQ12879 1464 aa28.54■■■□□ 2.16
CLPTM1L-215ENST00000515719 CLASP1Q7Z460 1538 aa28.49■■■□□ 2.15
CLPTM1L-215ENST00000515719 CUL7Q14999 1698 aa28.48■■■□□ 2.15
CLPTM1L-215ENST00000515719 IGF1RP08069 1367 aa28.48■■■□□ 2.15
CLPTM1L-215ENST00000515719 NUP160Q12769 1436 aa28.42■■■□□ 2.14
CLPTM1L-215ENST00000515719 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
CLPTM1L-215ENST00000515719 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
CLPTM1L-215ENST00000515719 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
CLPTM1L-215ENST00000515719 ARHGEF11O15085 1522 aa28.4■■■□□ 2.14
CLPTM1L-215ENST00000515719 CEP170Q5SW79 1584 aa28.4■■■□□ 2.14
CLPTM1L-215ENST00000515719 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
CLPTM1L-215ENST00000515719 CARMIL1Q5VZK9 1371 aa28.33■■■□□ 2.13
CLPTM1L-215ENST00000515719 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
CLPTM1L-215ENST00000515719 SHROOM2Q13796 1616 aa28.21■■■□□ 2.11
CLPTM1L-215ENST00000515719 RAPGEF2Q9Y4G8 1499 aa28.19■■■□□ 2.1
CLPTM1L-215ENST00000515719 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms