RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
LINC01843-201ENST00000515627 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
LINC01843-201ENST00000515627 ABCC9O60706 1549 aa22.87■■□□□ 1.25
LINC01843-201ENST00000515627 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
LINC01843-201ENST00000515627 NACADO15069 1562 aa21.65■■□□□ 1.06
LINC01843-201ENST00000515627 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
LINC01843-201ENST00000515627 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
LINC01843-201ENST00000515627 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
LINC01843-201ENST00000515627 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
LINC01843-201ENST00000515627 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
LINC01843-201ENST00000515627 ZCCHC6Q5VYS8 1495 aaKnown RBP21.25■□□□□ 0.99
LINC01843-201ENST00000515627 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
LINC01843-201ENST00000515627 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.97
LINC01843-201ENST00000515627 AEBP2Q6ZN18 517 aaPredicted RBP20.96■□□□□ 0.95
LINC01843-201ENST00000515627 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
LINC01843-201ENST00000515627 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
LINC01843-201ENST00000515627 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
LINC01843-201ENST00000515627 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.9
LINC01843-201ENST00000515627 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
LINC01843-201ENST00000515627 NCAPD3P42695 1498 aa20■□□□□ 0.79
LINC01843-201ENST00000515627 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
LINC01843-201ENST00000515627 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
LINC01843-201ENST00000515627 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
LINC01843-201ENST00000515627 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
LINC01843-201ENST00000515627 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
LINC01843-201ENST00000515627 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
LINC01843-201ENST00000515627 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
LINC01843-201ENST00000515627 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
LINC01843-201ENST00000515627 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
LINC01843-201ENST00000515627 NESP48681 1621 aa19.69■□□□□ 0.74
LINC01843-201ENST00000515627 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
LINC01843-201ENST00000515627 CUX2O14529 1486 aa19.66■□□□□ 0.74
LINC01843-201ENST00000515627 DNAJC5Q9H3Z4 198 aa19.57■□□□□ 0.72
LINC01843-201ENST00000515627 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
LINC01843-201ENST00000515627 WIZO95785 1651 aa19.5■□□□□ 0.71
LINC01843-201ENST00000515627 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
LINC01843-201ENST00000515627 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
LINC01843-201ENST00000515627 PDS5BQ9NTI5 1447 aa19.38■□□□□ 0.69
LINC01843-201ENST00000515627 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
LINC01843-201ENST00000515627 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
LINC01843-201ENST00000515627 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
LINC01843-201ENST00000515627 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
LINC01843-201ENST00000515627 WDR62O43379 1518 aa19.21■□□□□ 0.67
LINC01843-201ENST00000515627 CFTRP13569 1480 aa19.2■□□□□ 0.66
LINC01843-201ENST00000515627 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
LINC01843-201ENST00000515627 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
LINC01843-201ENST00000515627 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
LINC01843-201ENST00000515627 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
LINC01843-201ENST00000515627 PRDM2Q13029 1718 aa18.99■□□□□ 0.63
LINC01843-201ENST00000515627 TOPBP1Q92547 1522 aa18.83■□□□□ 0.6
LINC01843-201ENST00000515627 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
LINC01843-201ENST00000515627 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
LINC01843-201ENST00000515627 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
LINC01843-201ENST00000515627 OSCARQ8IYS5 282 aa18.74■□□□□ 0.59
LINC01843-201ENST00000515627 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
LINC01843-201ENST00000515627 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
LINC01843-201ENST00000515627 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
LINC01843-201ENST00000515627 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
LINC01843-201ENST00000515627 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
LINC01843-201ENST00000515627 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
LINC01843-201ENST00000515627 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
LINC01843-201ENST00000515627 CUX1P39880 1505 aa18.54■□□□□ 0.56
LINC01843-201ENST00000515627 RIMBP3CA6NJZ7 1639 aa18.54■□□□□ 0.56
LINC01843-201ENST00000515627 RIMBP3BA6NNM3 1639 aa18.54■□□□□ 0.56
LINC01843-201ENST00000515627 RIMBP3Q9UFD9 1639 aa18.54■□□□□ 0.56
LINC01843-201ENST00000515627 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
LINC01843-201ENST00000515627 SOGA1O94964 1423 aa18.53■□□□□ 0.56
LINC01843-201ENST00000515627 CHD1O14646 1710 aa18.52■□□□□ 0.55
LINC01843-201ENST00000515627 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
LINC01843-201ENST00000515627 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
LINC01843-201ENST00000515627 SUPT5HO00267 1087 aaKnown RBP18.49■□□□□ 0.55
LINC01843-201ENST00000515627 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
LINC01843-201ENST00000515627 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
LINC01843-201ENST00000515627 FBLN2P98095 1184 aa18.41■□□□□ 0.54
LINC01843-201ENST00000515627 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
LINC01843-201ENST00000515627 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
LINC01843-201ENST00000515627 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
LINC01843-201ENST00000515627 ARAP1Q96P48 1450 aa18.33■□□□□ 0.52
LINC01843-201ENST00000515627 ABCA10Q8WWZ4 1543 aa18.32■□□□□ 0.52
LINC01843-201ENST00000515627 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
LINC01843-201ENST00000515627 GAPVD1Q14C86 1478 aa18.31■□□□□ 0.52
LINC01843-201ENST00000515627 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
LINC01843-201ENST00000515627 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
LINC01843-201ENST00000515627 SYNJ2O15056 1496 aa18.3■□□□□ 0.52
LINC01843-201ENST00000515627 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
LINC01843-201ENST00000515627 SYNJ1O43426 1573 aa18.27■□□□□ 0.52
LINC01843-201ENST00000515627 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
LINC01843-201ENST00000515627 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
LINC01843-201ENST00000515627 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
LINC01843-201ENST00000515627 ADAMTS12P58397 1594 aa18.16■□□□□ 0.5
LINC01843-201ENST00000515627 GRIN2AQ12879 1464 aa18.14■□□□□ 0.5
LINC01843-201ENST00000515627 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
LINC01843-201ENST00000515627 NUP160Q12769 1436 aa18.09■□□□□ 0.49
LINC01843-201ENST00000515627 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.48
LINC01843-201ENST00000515627 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
LINC01843-201ENST00000515627 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
LINC01843-201ENST00000515627 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
LINC01843-201ENST00000515627 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
LINC01843-201ENST00000515627 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
LINC01843-201ENST00000515627 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms