RNA–Protein interactions for RNA: ENST00000515257.6

CDH18-212, Transcript of cadherin 18, humanhuman

TSL 5

Gene CDH18, Length 1,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-212ENST00000515257 NISCHQ9Y2I1 1504 aa23.36■■□□□ 1.33
CDH18-212ENST00000515257 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
CDH18-212ENST00000515257 ABCC9O60706 1549 aa20.39■□□□□ 0.85
CDH18-212ENST00000515257 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
CDH18-212ENST00000515257 NACADO15069 1562 aa19.59■□□□□ 0.73
CDH18-212ENST00000515257 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
CDH18-212ENST00000515257 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
CDH18-212ENST00000515257 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
CDH18-212ENST00000515257 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
CDH18-212ENST00000515257 UNC13AQ9UPW8 1703 aa19.11■□□□□ 0.65
CDH18-212ENST00000515257 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
CDH18-212ENST00000515257 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
CDH18-212ENST00000515257 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
CDH18-212ENST00000515257 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
CDH18-212ENST00000515257 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
CDH18-212ENST00000515257 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.55
CDH18-212ENST00000515257 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
CDH18-212ENST00000515257 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
CDH18-212ENST00000515257 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
CDH18-212ENST00000515257 BAZ1AQ9NRL2 1556 aaPredicted RBP18.11■□□□□ 0.49
CDH18-212ENST00000515257 NCAPD3P42695 1498 aa18.08■□□□□ 0.49
CDH18-212ENST00000515257 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
CDH18-212ENST00000515257 AEBP2Q6ZN18 517 aaPredicted RBP18.05■□□□□ 0.48
CDH18-212ENST00000515257 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
CDH18-212ENST00000515257 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
CDH18-212ENST00000515257 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
CDH18-212ENST00000515257 HMGXB3Q12766 1538 aa17.97■□□□□ 0.47
CDH18-212ENST00000515257 BAZ1BQ9UIG0 1483 aaKnown RBP17.9■□□□□ 0.46
CDH18-212ENST00000515257 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
CDH18-212ENST00000515257 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.44
CDH18-212ENST00000515257 WIZO95785 1651 aa17.76■□□□□ 0.43
CDH18-212ENST00000515257 NESP48681 1621 aa17.62■□□□□ 0.41
CDH18-212ENST00000515257 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
CDH18-212ENST00000515257 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
CDH18-212ENST00000515257 ERCC6Q03468 1493 aa17.6■□□□□ 0.41
CDH18-212ENST00000515257 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
CDH18-212ENST00000515257 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
CDH18-212ENST00000515257 CUX2O14529 1486 aa17.47■□□□□ 0.39
CDH18-212ENST00000515257 CFTRP13569 1480 aa17.43■□□□□ 0.38
CDH18-212ENST00000515257 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.38
CDH18-212ENST00000515257 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
CDH18-212ENST00000515257 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
CDH18-212ENST00000515257 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.36
CDH18-212ENST00000515257 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
CDH18-212ENST00000515257 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
CDH18-212ENST00000515257 WDR62O43379 1518 aa17.25■□□□□ 0.35
CDH18-212ENST00000515257 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
CDH18-212ENST00000515257 SUPT5HO00267 1087 aaKnown RBP17.22■□□□□ 0.35
CDH18-212ENST00000515257 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
CDH18-212ENST00000515257 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
CDH18-212ENST00000515257 TOPBP1Q92547 1522 aa17.04■□□□□ 0.32
CDH18-212ENST00000515257 DNAJC5Q9H3Z4 198 aa17.03■□□□□ 0.32
CDH18-212ENST00000515257 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
CDH18-212ENST00000515257 IFT140Q96RY7 1462 aa16.97■□□□□ 0.31
CDH18-212ENST00000515257 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.3
CDH18-212ENST00000515257 CUX1P39880 1505 aa16.88■□□□□ 0.29
CDH18-212ENST00000515257 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
CDH18-212ENST00000515257 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
CDH18-212ENST00000515257 SOGA1O94964 1423 aa16.83■□□□□ 0.28
CDH18-212ENST00000515257 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
CDH18-212ENST00000515257 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
CDH18-212ENST00000515257 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
CDH18-212ENST00000515257 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.27
CDH18-212ENST00000515257 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
CDH18-212ENST00000515257 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
CDH18-212ENST00000515257 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
CDH18-212ENST00000515257 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
CDH18-212ENST00000515257 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
CDH18-212ENST00000515257 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
CDH18-212ENST00000515257 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
CDH18-212ENST00000515257 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
CDH18-212ENST00000515257 GRIN2BQ13224 1484 aa16.65■□□□□ 0.26
CDH18-212ENST00000515257 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
CDH18-212ENST00000515257 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
CDH18-212ENST00000515257 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
CDH18-212ENST00000515257 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
CDH18-212ENST00000515257 FBLN2P98095 1184 aa16.57■□□□□ 0.24
CDH18-212ENST00000515257 CHD1O14646 1710 aa16.57■□□□□ 0.24
CDH18-212ENST00000515257 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
CDH18-212ENST00000515257 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
CDH18-212ENST00000515257 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
CDH18-212ENST00000515257 ERICH3Q5RHP9 1530 aa16.48■□□□□ 0.23
CDH18-212ENST00000515257 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
CDH18-212ENST00000515257 ADAMTS12P58397 1594 aa16.44■□□□□ 0.22
CDH18-212ENST00000515257 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
CDH18-212ENST00000515257 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
CDH18-212ENST00000515257 RIMBP3CA6NJZ7 1639 aa16.43■□□□□ 0.22
CDH18-212ENST00000515257 RIMBP3BA6NNM3 1639 aa16.43■□□□□ 0.22
CDH18-212ENST00000515257 RIMBP3Q9UFD9 1639 aa16.43■□□□□ 0.22
CDH18-212ENST00000515257 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
CDH18-212ENST00000515257 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
CDH18-212ENST00000515257 IGF1RP08069 1367 aa16.38■□□□□ 0.21
CDH18-212ENST00000515257 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
CDH18-212ENST00000515257 NUP160Q12769 1436 aa16.37■□□□□ 0.21
CDH18-212ENST00000515257 CEP170Q5SW79 1584 aa16.32■□□□□ 0.2
CDH18-212ENST00000515257 CUL7Q14999 1698 aa16.3■□□□□ 0.2
CDH18-212ENST00000515257 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
CDH18-212ENST00000515257 CYB5RLQ6IPT4 315 aa16.29■□□□□ 0.2
CDH18-212ENST00000515257 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
CDH18-212ENST00000515257 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms