RNA–Protein interactions for RNA: ENST00000515129.5

SEMA6A-215, Transcript of semaphorin 6A, humanhuman

TSL 2

Gene SEMA6A, Length 2,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-215ENST00000515129 NISCHQ9Y2I1 1504 aa24.9■■□□□ 1.58
SEMA6A-215ENST00000515129 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
SEMA6A-215ENST00000515129 ABCC9O60706 1549 aa22.02■■□□□ 1.12
SEMA6A-215ENST00000515129 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
SEMA6A-215ENST00000515129 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
SEMA6A-215ENST00000515129 NACADO15069 1562 aa20.91■□□□□ 0.94
SEMA6A-215ENST00000515129 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
SEMA6A-215ENST00000515129 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
SEMA6A-215ENST00000515129 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
SEMA6A-215ENST00000515129 UNC13AQ9UPW8 1703 aa20.57■□□□□ 0.88
SEMA6A-215ENST00000515129 DNAJC5BQ9UF47 199 aa20.56■□□□□ 0.88
SEMA6A-215ENST00000515129 DCAF1Q9Y4B6 1507 aa20.54■□□□□ 0.88
SEMA6A-215ENST00000515129 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
SEMA6A-215ENST00000515129 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
SEMA6A-215ENST00000515129 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
SEMA6A-215ENST00000515129 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
SEMA6A-215ENST00000515129 CC2D2AQ9P2K1 1620 aa19.89■□□□□ 0.77
SEMA6A-215ENST00000515129 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
SEMA6A-215ENST00000515129 SMARCA4P51532 1647 aa19.36■□□□□ 0.69
SEMA6A-215ENST00000515129 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
SEMA6A-215ENST00000515129 ATAD2BQ9ULI0 1458 aa19.34■□□□□ 0.69
SEMA6A-215ENST00000515129 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.68
SEMA6A-215ENST00000515129 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
SEMA6A-215ENST00000515129 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
SEMA6A-215ENST00000515129 HMGXB3Q12766 1538 aa19.19■□□□□ 0.66
SEMA6A-215ENST00000515129 PEG3Q9GZU2 1588 aa19.16■□□□□ 0.66
SEMA6A-215ENST00000515129 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
SEMA6A-215ENST00000515129 NESP48681 1621 aa19.02■□□□□ 0.64
SEMA6A-215ENST00000515129 WIZO95785 1651 aa18.99■□□□□ 0.63
SEMA6A-215ENST00000515129 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
SEMA6A-215ENST00000515129 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
SEMA6A-215ENST00000515129 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
SEMA6A-215ENST00000515129 LAMC3Q9Y6N6 1575 aa18.83■□□□□ 0.6
SEMA6A-215ENST00000515129 CUX2O14529 1486 aa18.81■□□□□ 0.6
SEMA6A-215ENST00000515129 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
SEMA6A-215ENST00000515129 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
SEMA6A-215ENST00000515129 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
SEMA6A-215ENST00000515129 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
SEMA6A-215ENST00000515129 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
SEMA6A-215ENST00000515129 CFTRP13569 1480 aa18.61■□□□□ 0.57
SEMA6A-215ENST00000515129 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
SEMA6A-215ENST00000515129 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
SEMA6A-215ENST00000515129 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
SEMA6A-215ENST00000515129 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
SEMA6A-215ENST00000515129 CEP164Q9UPV0 1460 aa18.53■□□□□ 0.56
SEMA6A-215ENST00000515129 WDR62O43379 1518 aa18.51■□□□□ 0.55
SEMA6A-215ENST00000515129 URB2Q14146 1524 aaKnown RBP18.42■□□□□ 0.54
SEMA6A-215ENST00000515129 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
SEMA6A-215ENST00000515129 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
SEMA6A-215ENST00000515129 TOPBP1Q92547 1522 aa18.24■□□□□ 0.51
SEMA6A-215ENST00000515129 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
SEMA6A-215ENST00000515129 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
SEMA6A-215ENST00000515129 IFT140Q96RY7 1462 aa18.15■□□□□ 0.5
SEMA6A-215ENST00000515129 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
SEMA6A-215ENST00000515129 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
SEMA6A-215ENST00000515129 TARBP1Q13395 1621 aaKnown RBP18.06■□□□□ 0.48
SEMA6A-215ENST00000515129 CUX1P39880 1505 aa18.04■□□□□ 0.48
SEMA6A-215ENST00000515129 RAD54L2Q9Y4B4 1467 aa18.04■□□□□ 0.48
SEMA6A-215ENST00000515129 AQRO60306 1485 aaKnown RBP eCLIP18.03■□□□□ 0.48
SEMA6A-215ENST00000515129 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
SEMA6A-215ENST00000515129 EIF4G3O43432 1585 aaKnown RBP18.02■□□□□ 0.48
SEMA6A-215ENST00000515129 FGD5Q6ZNL6 1462 aa17.99■□□□□ 0.47
SEMA6A-215ENST00000515129 SOGA1O94964 1423 aa17.99■□□□□ 0.47
SEMA6A-215ENST00000515129 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
SEMA6A-215ENST00000515129 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
SEMA6A-215ENST00000515129 CHD1O14646 1710 aa17.84■□□□□ 0.45
SEMA6A-215ENST00000515129 WDR97A6NE52 1622 aa17.83■□□□□ 0.44
SEMA6A-215ENST00000515129 FBLN2P98095 1184 aa17.83■□□□□ 0.44
SEMA6A-215ENST00000515129 SNAPC4Q5SXM2 1469 aa17.82■□□□□ 0.44
SEMA6A-215ENST00000515129 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
SEMA6A-215ENST00000515129 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
SEMA6A-215ENST00000515129 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
SEMA6A-215ENST00000515129 GRIN2BQ13224 1484 aa17.78■□□□□ 0.44
SEMA6A-215ENST00000515129 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
SEMA6A-215ENST00000515129 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
SEMA6A-215ENST00000515129 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
SEMA6A-215ENST00000515129 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
SEMA6A-215ENST00000515129 GAPVD1Q14C86 1478 aa17.76■□□□□ 0.43
SEMA6A-215ENST00000515129 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
SEMA6A-215ENST00000515129 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
SEMA6A-215ENST00000515129 MAGI1Q96QZ7 1491 aaPredicted RBP17.74■□□□□ 0.43
SEMA6A-215ENST00000515129 ABCA5Q8WWZ7 1642 aa17.73■□□□□ 0.43
SEMA6A-215ENST00000515129 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
SEMA6A-215ENST00000515129 PBRM1Q86U86 1689 aa17.71■□□□□ 0.43
SEMA6A-215ENST00000515129 SYNJ2O15056 1496 aa17.7■□□□□ 0.42
SEMA6A-215ENST00000515129 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
SEMA6A-215ENST00000515129 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
SEMA6A-215ENST00000515129 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
SEMA6A-215ENST00000515129 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
SEMA6A-215ENST00000515129 ADAMTS12P58397 1594 aa17.58■□□□□ 0.4
SEMA6A-215ENST00000515129 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
SEMA6A-215ENST00000515129 ERICH3Q5RHP9 1530 aa17.55■□□□□ 0.4
SEMA6A-215ENST00000515129 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
SEMA6A-215ENST00000515129 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
SEMA6A-215ENST00000515129 NUP160Q12769 1436 aa17.51■□□□□ 0.39
SEMA6A-215ENST00000515129 FAM9AQ8IZU1 332 aaPredicted RBP17.47■□□□□ 0.39
SEMA6A-215ENST00000515129 ERCC6L2Q5T890 1561 aa17.46■□□□□ 0.39
SEMA6A-215ENST00000515129 IGF1RP08069 1367 aa17.45■□□□□ 0.38
SEMA6A-215ENST00000515129 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
SEMA6A-215ENST00000515129 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms