RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 NISCHQ9Y2I1 1504 aa38.91■■■■□ 3.82
SNCAIP-220ENST00000514497 ABCC9O60706 1549 aa35.93■■■■□ 3.34
SNCAIP-220ENST00000514497 CCDC180Q9P1Z9 1646 aa34.98■■■■□ 3.19
SNCAIP-220ENST00000514497 DNAJC5BQ9UF47 199 aa34.55■■■■□ 3.12
SNCAIP-220ENST00000514497 RB1CC1Q8TDY2 1594 aa33.77■■■■□ 3
SNCAIP-220ENST00000514497 PABPN1Q86U42 306 aaKnown RBP eCLIP33.28■■■□□ 2.92
SNCAIP-220ENST00000514497 NACADO15069 1562 aa33.28■■■□□ 2.92
SNCAIP-220ENST00000514497 UNC13AQ9UPW8 1703 aa33.07■■■□□ 2.88
SNCAIP-220ENST00000514497 DCAF8L2P0C7V8 631 aa32.94■■■□□ 2.86
SNCAIP-220ENST00000514497 BICRAQ9NZM4 1560 aa32.81■■■□□ 2.84
SNCAIP-220ENST00000514497 ZCCHC6Q5VYS8 1495 aaKnown RBP32.56■■■□□ 2.8
SNCAIP-220ENST00000514497 CECR2Q9BXF3 1484 aa32.46■■■□□ 2.79
SNCAIP-220ENST00000514497 DNAJC5Q9H3Z4 198 aa32.45■■■□□ 2.79
SNCAIP-220ENST00000514497 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.78
SNCAIP-220ENST00000514497 CC2D2AQ9P2K1 1620 aa32.42■■■□□ 2.78
SNCAIP-220ENST00000514497 DCAF1Q9Y4B6 1507 aa32.34■■■□□ 2.77
SNCAIP-220ENST00000514497 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
SNCAIP-220ENST00000514497 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
SNCAIP-220ENST00000514497 SCRIBQ14160 1630 aa31.82■■■□□ 2.69
SNCAIP-220ENST00000514497 CUX2O14529 1486 aa31.35■■■□□ 2.61
SNCAIP-220ENST00000514497 ERCC6Q03468 1493 aa31.11■■■□□ 2.57
SNCAIP-220ENST00000514497 NCAPD3P42695 1498 aa30.71■■■□□ 2.51
SNCAIP-220ENST00000514497 TRIM41Q8WV44 630 aa30.67■■■□□ 2.5
SNCAIP-220ENST00000514497 NESP48681 1621 aa30.58■■■□□ 2.49
SNCAIP-220ENST00000514497 ATAD2BQ9ULI0 1458 aa30.49■■■□□ 2.47
SNCAIP-220ENST00000514497 THOC2Q8NI27 1593 aaKnown RBP30.48■■■□□ 2.47
SNCAIP-220ENST00000514497 HMGXB3Q12766 1538 aa30.41■■■□□ 2.46
SNCAIP-220ENST00000514497 SMARCA2P51531 1590 aa30.37■■■□□ 2.45
SNCAIP-220ENST00000514497 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
SNCAIP-220ENST00000514497 KIF21AQ7Z4S6 1674 aa30.21■■■□□ 2.43
SNCAIP-220ENST00000514497 LAMC3Q9Y6N6 1575 aa30.21■■■□□ 2.43
SNCAIP-220ENST00000514497 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
SNCAIP-220ENST00000514497 BAZ1AQ9NRL2 1556 aaPredicted RBP30.15■■■□□ 2.42
SNCAIP-220ENST00000514497 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
SNCAIP-220ENST00000514497 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
SNCAIP-220ENST00000514497 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
SNCAIP-220ENST00000514497 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
SNCAIP-220ENST00000514497 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
SNCAIP-220ENST00000514497 WDR62O43379 1518 aa29.82■■■□□ 2.36
SNCAIP-220ENST00000514497 OSCARQ8IYS5 282 aa29.76■■■□□ 2.35
SNCAIP-220ENST00000514497 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
SNCAIP-220ENST00000514497 WIZO95785 1651 aa29.67■■■□□ 2.34
SNCAIP-220ENST00000514497 SUPT5HO00267 1087 aaKnown RBP29.57■■■□□ 2.32
SNCAIP-220ENST00000514497 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
SNCAIP-220ENST00000514497 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
SNCAIP-220ENST00000514497 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
SNCAIP-220ENST00000514497 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
SNCAIP-220ENST00000514497 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.3
SNCAIP-220ENST00000514497 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
SNCAIP-220ENST00000514497 ARHGEF11O15085 1522 aa29.3■■■□□ 2.28
SNCAIP-220ENST00000514497 URB2Q14146 1524 aaKnown RBP29.24■■■□□ 2.27
SNCAIP-220ENST00000514497 CFTRP13569 1480 aa29.19■■■□□ 2.26
SNCAIP-220ENST00000514497 TRHP20396 242 aaPredicted RBP29.18■■■□□ 2.26
SNCAIP-220ENST00000514497 CYB5RLQ6IPT4 315 aa29.16■■■□□ 2.26
SNCAIP-220ENST00000514497 AEBP2Q6ZN18 517 aaPredicted RBP29.07■■■□□ 2.24
SNCAIP-220ENST00000514497 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
SNCAIP-220ENST00000514497 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
SNCAIP-220ENST00000514497 IFT140Q96RY7 1462 aa28.98■■■□□ 2.23
SNCAIP-220ENST00000514497 ARAP1Q96P48 1450 aa28.93■■■□□ 2.22
SNCAIP-220ENST00000514497 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
SNCAIP-220ENST00000514497 CHD1O14646 1710 aa28.88■■■□□ 2.21
SNCAIP-220ENST00000514497 EIF4G3O43432 1585 aaKnown RBP28.87■■■□□ 2.21
SNCAIP-220ENST00000514497 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
SNCAIP-220ENST00000514497 FBLN2P98095 1184 aa28.7■■■□□ 2.18
SNCAIP-220ENST00000514497 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.18
SNCAIP-220ENST00000514497 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
SNCAIP-220ENST00000514497 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
SNCAIP-220ENST00000514497 DNMBPQ6XZF7 1577 aa28.57■■■□□ 2.16
SNCAIP-220ENST00000514497 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.15
SNCAIP-220ENST00000514497 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
SNCAIP-220ENST00000514497 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
SNCAIP-220ENST00000514497 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
SNCAIP-220ENST00000514497 TDRD9Q8NDG6 1382 aaKnown RBP28.33■■■□□ 2.13
SNCAIP-220ENST00000514497 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
SNCAIP-220ENST00000514497 RAD54L2Q9Y4B4 1467 aa28.31■■■□□ 2.12
SNCAIP-220ENST00000514497 SOGA1O94964 1423 aa28.25■■■□□ 2.11
SNCAIP-220ENST00000514497 GAPVD1Q14C86 1478 aa28.24■■■□□ 2.11
SNCAIP-220ENST00000514497 WDR97A6NE52 1622 aa28.21■■■□□ 2.11
SNCAIP-220ENST00000514497 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
SNCAIP-220ENST00000514497 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
SNCAIP-220ENST00000514497 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
SNCAIP-220ENST00000514497 GRIN2BQ13224 1484 aa28.11■■■□□ 2.09
SNCAIP-220ENST00000514497 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
SNCAIP-220ENST00000514497 FGD5Q6ZNL6 1462 aa28.08■■■□□ 2.09
SNCAIP-220ENST00000514497 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
SNCAIP-220ENST00000514497 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
SNCAIP-220ENST00000514497 CUX1P39880 1505 aa28.05■■■□□ 2.08
SNCAIP-220ENST00000514497 PBRM1Q86U86 1689 aa28■■■□□ 2.07
SNCAIP-220ENST00000514497 ERCC6L2Q5T890 1561 aa27.95■■■□□ 2.07
SNCAIP-220ENST00000514497 KIF13AQ9H1H9 1805 aa27.95■■■□□ 2.06
SNCAIP-220ENST00000514497 ILDR1Q86SU0 546 aaPredicted RBP27.9■■■□□ 2.06
SNCAIP-220ENST00000514497 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
SNCAIP-220ENST00000514497 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
SNCAIP-220ENST00000514497 GRIN2AQ12879 1464 aa27.76■■■□□ 2.03
SNCAIP-220ENST00000514497 SHROOM2Q13796 1616 aa27.7■■■□□ 2.03
SNCAIP-220ENST00000514497 KDM4FA0A1W2PPD8 638 aa27.7■■■□□ 2.02
SNCAIP-220ENST00000514497 ABCA10Q8WWZ4 1543 aa27.69■■■□□ 2.02
SNCAIP-220ENST00000514497 NUP160Q12769 1436 aa27.67■■■□□ 2.02
SNCAIP-220ENST00000514497 FAM69CQ0P6D2 419 aa27.64■■■□□ 2.02
SNCAIP-220ENST00000514497 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms