RNA–Protein interactions for RNA: ENST00000514099.5

GRAMD2B-215, Transcript of GRAM domain containing 2B, humanhuman

TSL 2

Gene GRAMD2B, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-215ENST00000514099 NISCHQ9Y2I1 1504 aa51.26■■■■■ 5.8
GRAMD2B-215ENST00000514099 CCDC180Q9P1Z9 1646 aa45.58■■■■■ 4.89
GRAMD2B-215ENST00000514099 ABCC9O60706 1549 aa44.56■■■■■ 4.72
GRAMD2B-215ENST00000514099 RB1CC1Q8TDY2 1594 aa42.86■■■■■ 4.45
GRAMD2B-215ENST00000514099 NACADO15069 1562 aa42.8■■■■■ 4.44
GRAMD2B-215ENST00000514099 ZCCHC6Q5VYS8 1495 aaKnown RBP42.74■■■■■ 4.43
GRAMD2B-215ENST00000514099 DCAF8L2P0C7V8 631 aa42.72■■■■■ 4.43
GRAMD2B-215ENST00000514099 MYO15BQ96JP2 1530 aa42.55■■■■■ 4.4
GRAMD2B-215ENST00000514099 DCAF1Q9Y4B6 1507 aa42.39■■■■■ 4.38
GRAMD2B-215ENST00000514099 UNC13AQ9UPW8 1703 aa41.97■■■■■ 4.31
GRAMD2B-215ENST00000514099 SCRIBQ14160 1630 aa41.63■■■■■ 4.25
GRAMD2B-215ENST00000514099 BICRAQ9NZM4 1560 aa41.62■■■■■ 4.25
GRAMD2B-215ENST00000514099 PABPN1Q86U42 306 aaKnown RBP eCLIP41.6■■■■■ 4.25
GRAMD2B-215ENST00000514099 SHROOM4Q9ULL8 1493 aa41.11■■■■■ 4.17
GRAMD2B-215ENST00000514099 DNAJC5BQ9UF47 199 aa40.83■■■■■ 4.13
GRAMD2B-215ENST00000514099 EIF4G1Q04637 1599 aaKnown RBP40.49■■■■■ 4.07
GRAMD2B-215ENST00000514099 CC2D2AQ9P2K1 1620 aa40.32■■■■■ 4.04
GRAMD2B-215ENST00000514099 CECR2Q9BXF3 1484 aa40.02■■■■■ 4
GRAMD2B-215ENST00000514099 SMARCA4P51532 1647 aa39.81■■■■□ 3.96
GRAMD2B-215ENST00000514099 BAZ1AQ9NRL2 1556 aaPredicted RBP39.73■■■■□ 3.95
GRAMD2B-215ENST00000514099 ATAD2BQ9ULI0 1458 aa39.54■■■■□ 3.92
GRAMD2B-215ENST00000514099 MROH2BQ7Z745 1585 aa39.53■■■■□ 3.92
GRAMD2B-215ENST00000514099 SMARCA2P51531 1590 aa39.49■■■■□ 3.91
GRAMD2B-215ENST00000514099 NCAPD3P42695 1498 aa39.48■■■■□ 3.91
GRAMD2B-215ENST00000514099 PEG3Q9GZU2 1588 aa39.4■■■■□ 3.9
GRAMD2B-215ENST00000514099 HMGXB3Q12766 1538 aa39.35■■■■□ 3.89
GRAMD2B-215ENST00000514099 BAZ1BQ9UIG0 1483 aaKnown RBP39.22■■■■□ 3.87
GRAMD2B-215ENST00000514099 WIZO95785 1651 aa39.13■■■■□ 3.85
GRAMD2B-215ENST00000514099 RSF1Q96T23 1441 aaPredicted RBP39.06■■■■□ 3.84
GRAMD2B-215ENST00000514099 TOP2AP11388 1531 aaKnown RBP38.7■■■■□ 3.79
GRAMD2B-215ENST00000514099 NESP48681 1621 aa38.59■■■■□ 3.77
GRAMD2B-215ENST00000514099 LAMC3Q9Y6N6 1575 aa38.46■■■■□ 3.75
GRAMD2B-215ENST00000514099 ERCC6Q03468 1493 aa38.38■■■■□ 3.73
GRAMD2B-215ENST00000514099 CADPSQ9ULU8 1353 aa38.32■■■■□ 3.73
GRAMD2B-215ENST00000514099 CCDC88BA6NC98 1476 aa38.21■■■■□ 3.71
GRAMD2B-215ENST00000514099 KIF21AQ7Z4S6 1674 aa38.17■■■■□ 3.7
GRAMD2B-215ENST00000514099 PDS5BQ9NTI5 1447 aa38.15■■■■□ 3.7
GRAMD2B-215ENST00000514099 CFTRP13569 1480 aa38.14■■■■□ 3.7
GRAMD2B-215ENST00000514099 SUPT5HO00267 1087 aaKnown RBP38.06■■■■□ 3.68
GRAMD2B-215ENST00000514099 THOC2Q8NI27 1593 aaKnown RBP38.04■■■■□ 3.68
GRAMD2B-215ENST00000514099 CUX2O14529 1486 aa37.95■■■■□ 3.67
GRAMD2B-215ENST00000514099 FANCD2Q9BXW9 1451 aa37.93■■■■□ 3.66
GRAMD2B-215ENST00000514099 PRDM2Q13029 1718 aa37.91■■■■□ 3.66
GRAMD2B-215ENST00000514099 CEP164Q9UPV0 1460 aa37.88■■■■□ 3.65
GRAMD2B-215ENST00000514099 MRC2Q9UBG0 1479 aa37.81■■■■□ 3.64
GRAMD2B-215ENST00000514099 WDR62O43379 1518 aa37.72■■■■□ 3.63
GRAMD2B-215ENST00000514099 URB2Q14146 1524 aaKnown RBP37.57■■■■□ 3.61
GRAMD2B-215ENST00000514099 TOPBP1Q92547 1522 aa37.33■■■■□ 3.57
GRAMD2B-215ENST00000514099 DNMBPQ6XZF7 1577 aa37.31■■■■□ 3.56
GRAMD2B-215ENST00000514099 ABCC8Q09428 1581 aa37.25■■■■□ 3.55
GRAMD2B-215ENST00000514099 CUX1P39880 1505 aa37.09■■■■□ 3.53
GRAMD2B-215ENST00000514099 IFT140Q96RY7 1462 aa37.06■■■■□ 3.52
GRAMD2B-215ENST00000514099 POLA1P09884 1462 aaPredicted RBP37.03■■■■□ 3.52
GRAMD2B-215ENST00000514099 TARBP1Q13395 1621 aaKnown RBP36.95■■■■□ 3.51
GRAMD2B-215ENST00000514099 FGD5Q6ZNL6 1462 aa36.95■■■■□ 3.51
GRAMD2B-215ENST00000514099 ZNF608Q9ULD9 1512 aaPredicted RBP36.94■■■■□ 3.5
GRAMD2B-215ENST00000514099 RAD54L2Q9Y4B4 1467 aa36.87■■■■□ 3.49
GRAMD2B-215ENST00000514099 EIF4G3O43432 1585 aaKnown RBP36.83■■■■□ 3.49
GRAMD2B-215ENST00000514099 WRNQ14191 1432 aaPredicted RBP eCLIP36.83■■■■□ 3.49
GRAMD2B-215ENST00000514099 SOGA1O94964 1423 aa36.81■■■■□ 3.48
GRAMD2B-215ENST00000514099 SYNJ1O43426 1573 aa36.8■■■■□ 3.48
GRAMD2B-215ENST00000514099 BIVM-ERCC5R4GMW8 1640 aa36.78■■■■□ 3.48
GRAMD2B-215ENST00000514099 TOP2BQ02880 1626 aa36.77■■■■□ 3.48
GRAMD2B-215ENST00000514099 AQRO60306 1485 aaKnown RBP eCLIP36.71■■■■□ 3.47
GRAMD2B-215ENST00000514099 WDR97A6NE52 1622 aa36.7■■■■□ 3.46
GRAMD2B-215ENST00000514099 DNAJC5Q9H3Z4 198 aa36.68■■■■□ 3.46
GRAMD2B-215ENST00000514099 TDRD9Q8NDG6 1382 aaKnown RBP36.63■■■■□ 3.45
GRAMD2B-215ENST00000514099 ABCA10Q8WWZ4 1543 aa36.57■■■■□ 3.45
GRAMD2B-215ENST00000514099 ABCA5Q8WWZ7 1642 aa36.48■■■■□ 3.43
GRAMD2B-215ENST00000514099 GAPVD1Q14C86 1478 aa36.42■■■■□ 3.42
GRAMD2B-215ENST00000514099 PBRM1Q86U86 1689 aa36.42■■■■□ 3.42
GRAMD2B-215ENST00000514099 GRIN2BQ13224 1484 aa36.41■■■■□ 3.42
GRAMD2B-215ENST00000514099 SNAPC4Q5SXM2 1469 aa36.4■■■■□ 3.42
GRAMD2B-215ENST00000514099 CHD1O14646 1710 aa36.35■■■■□ 3.41
GRAMD2B-215ENST00000514099 MAGI1Q96QZ7 1491 aaPredicted RBP36.32■■■■□ 3.4
GRAMD2B-215ENST00000514099 OSCARQ8IYS5 282 aa36.3■■■■□ 3.4
GRAMD2B-215ENST00000514099 FBLN2P98095 1184 aa36.2■■■■□ 3.39
GRAMD2B-215ENST00000514099 SYNJ2O15056 1496 aa36.18■■■■□ 3.38
GRAMD2B-215ENST00000514099 ERICH3Q5RHP9 1530 aa36.13■■■■□ 3.37
GRAMD2B-215ENST00000514099 ADAMTS12P58397 1594 aa36.13■■■■□ 3.37
GRAMD2B-215ENST00000514099 CHMP7Q8WUX9 453 aaPredicted RBP36.08■■■■□ 3.37
GRAMD2B-215ENST00000514099 KIF27Q86VH2 1401 aa36.03■■■■□ 3.36
GRAMD2B-215ENST00000514099 FHAD1B1AJZ9 1412 aa35.99■■■■□ 3.35
GRAMD2B-215ENST00000514099 GRIN2AQ12879 1464 aa35.97■■■■□ 3.35
GRAMD2B-215ENST00000514099 CLASP1Q7Z460 1538 aa35.94■■■■□ 3.34
GRAMD2B-215ENST00000514099 TRIM41Q8WV44 630 aa35.9■■■■□ 3.34
GRAMD2B-215ENST00000514099 IGF1RP08069 1367 aa35.86■■■■□ 3.33
GRAMD2B-215ENST00000514099 RIMBP3CA6NJZ7 1639 aa35.86■■■■□ 3.33
GRAMD2B-215ENST00000514099 RIMBP3BA6NNM3 1639 aa35.86■■■■□ 3.33
GRAMD2B-215ENST00000514099 RIMBP3Q9UFD9 1639 aa35.86■■■■□ 3.33
GRAMD2B-215ENST00000514099 ARHGEF11O15085 1522 aa35.85■■■■□ 3.33
GRAMD2B-215ENST00000514099 CUL7Q14999 1698 aa35.83■■■■□ 3.33
GRAMD2B-215ENST00000514099 CEP170Q5SW79 1584 aa35.82■■■■□ 3.33
GRAMD2B-215ENST00000514099 NUP160Q12769 1436 aa35.79■■■■□ 3.32
GRAMD2B-215ENST00000514099 RUSC2Q8N2Y8 1516 aa35.78■■■■□ 3.32
GRAMD2B-215ENST00000514099 CARMIL1Q5VZK9 1371 aa35.65■■■■□ 3.3
GRAMD2B-215ENST00000514099 ARAP1Q96P48 1450 aa35.56■■■■□ 3.28
GRAMD2B-215ENST00000514099 SHROOM2Q13796 1616 aa35.56■■■■□ 3.28
GRAMD2B-215ENST00000514099 CHIC1Q5VXU3 224 aa35.52■■■■□ 3.28
GRAMD2B-215ENST00000514099 ERCC6L2Q5T890 1561 aa35.49■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms