RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-208ENST00000513965 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
COPG1-208ENST00000513965 ABCC9O60706 1549 aa25.87■■□□□ 1.73
COPG1-208ENST00000513965 CCDC180Q9P1Z9 1646 aa25.46■■□□□ 1.67
COPG1-208ENST00000513965 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
COPG1-208ENST00000513965 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
COPG1-208ENST00000513965 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
COPG1-208ENST00000513965 NACADO15069 1562 aa24.2■■□□□ 1.46
COPG1-208ENST00000513965 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
COPG1-208ENST00000513965 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
COPG1-208ENST00000513965 MYO15BQ96JP2 1530 aa23.73■■□□□ 1.39
COPG1-208ENST00000513965 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
COPG1-208ENST00000513965 ZCCHC6Q5VYS8 1495 aaKnown RBP23.5■■□□□ 1.35
COPG1-208ENST00000513965 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
COPG1-208ENST00000513965 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
COPG1-208ENST00000513965 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
COPG1-208ENST00000513965 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
COPG1-208ENST00000513965 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
COPG1-208ENST00000513965 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
COPG1-208ENST00000513965 DNAJC5Q9H3Z4 198 aa22.57■■□□□ 1.2
COPG1-208ENST00000513965 NCAPD3P42695 1498 aa22.39■■□□□ 1.17
COPG1-208ENST00000513965 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
COPG1-208ENST00000513965 ATAD2BQ9ULI0 1458 aa22.32■■□□□ 1.16
COPG1-208ENST00000513965 CUX2O14529 1486 aa22.23■■□□□ 1.15
COPG1-208ENST00000513965 SMARCA4P51532 1647 aa22.2■■□□□ 1.14
COPG1-208ENST00000513965 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
COPG1-208ENST00000513965 NESP48681 1621 aa22.17■■□□□ 1.14
COPG1-208ENST00000513965 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
COPG1-208ENST00000513965 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
COPG1-208ENST00000513965 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
COPG1-208ENST00000513965 MROH2BQ7Z745 1585 aa21.96■■□□□ 1.11
COPG1-208ENST00000513965 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
COPG1-208ENST00000513965 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
COPG1-208ENST00000513965 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.09
COPG1-208ENST00000513965 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
COPG1-208ENST00000513965 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
COPG1-208ENST00000513965 CADPSQ9ULU8 1353 aa21.75■■□□□ 1.07
COPG1-208ENST00000513965 WIZO95785 1651 aa21.68■■□□□ 1.06
COPG1-208ENST00000513965 TRIM41Q8WV44 630 aa21.63■■□□□ 1.05
COPG1-208ENST00000513965 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
COPG1-208ENST00000513965 WDR62O43379 1518 aa21.51■■□□□ 1.03
COPG1-208ENST00000513965 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
COPG1-208ENST00000513965 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
COPG1-208ENST00000513965 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
COPG1-208ENST00000513965 CFTRP13569 1480 aa21.42■■□□□ 1.02
COPG1-208ENST00000513965 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
COPG1-208ENST00000513965 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
COPG1-208ENST00000513965 URB2Q14146 1524 aaKnown RBP21.31■■□□□ 1
COPG1-208ENST00000513965 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
COPG1-208ENST00000513965 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
COPG1-208ENST00000513965 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
COPG1-208ENST00000513965 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
COPG1-208ENST00000513965 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
COPG1-208ENST00000513965 FBLN2P98095 1184 aa20.98■□□□□ 0.95
COPG1-208ENST00000513965 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
COPG1-208ENST00000513965 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
COPG1-208ENST00000513965 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
COPG1-208ENST00000513965 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
COPG1-208ENST00000513965 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.944e-9■■■■■ 41.3
COPG1-208ENST00000513965 CYB5RLQ6IPT4 315 aa20.95■□□□□ 0.94
COPG1-208ENST00000513965 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
COPG1-208ENST00000513965 ARHGEF11O15085 1522 aa20.9■□□□□ 0.94
COPG1-208ENST00000513965 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
COPG1-208ENST00000513965 RAD54L2Q9Y4B4 1467 aa20.83■□□□□ 0.93
COPG1-208ENST00000513965 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.92
COPG1-208ENST00000513965 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
COPG1-208ENST00000513965 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
COPG1-208ENST00000513965 SOGA1O94964 1423 aa20.8■□□□□ 0.92
COPG1-208ENST00000513965 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
COPG1-208ENST00000513965 CHD1O14646 1710 aa20.76■□□□□ 0.91
COPG1-208ENST00000513965 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
COPG1-208ENST00000513965 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
COPG1-208ENST00000513965 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
COPG1-208ENST00000513965 SNAPC4Q5SXM2 1469 aa20.66■□□□□ 0.9
COPG1-208ENST00000513965 SUPT5HO00267 1087 aaKnown RBP20.63■□□□□ 0.89
COPG1-208ENST00000513965 CUX1P39880 1505 aa20.63■□□□□ 0.89
COPG1-208ENST00000513965 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
COPG1-208ENST00000513965 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
COPG1-208ENST00000513965 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
COPG1-208ENST00000513965 SYNJ2O15056 1496 aa20.51■□□□□ 0.87
COPG1-208ENST00000513965 CLASP1Q7Z460 1538 aa20.51■□□□□ 0.87
COPG1-208ENST00000513965 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
COPG1-208ENST00000513965 WDR97A6NE52 1622 aa20.49■□□□□ 0.87
COPG1-208ENST00000513965 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
COPG1-208ENST00000513965 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
COPG1-208ENST00000513965 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
COPG1-208ENST00000513965 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.84
COPG1-208ENST00000513965 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
COPG1-208ENST00000513965 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
COPG1-208ENST00000513965 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
COPG1-208ENST00000513965 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
COPG1-208ENST00000513965 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
COPG1-208ENST00000513965 NUP160Q12769 1436 aa20.21■□□□□ 0.83
COPG1-208ENST00000513965 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
COPG1-208ENST00000513965 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
COPG1-208ENST00000513965 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
COPG1-208ENST00000513965 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
COPG1-208ENST00000513965 PRG4Q92954 1404 aaPredicted RBP20.13■□□□□ 0.81
COPG1-208ENST00000513965 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
COPG1-208ENST00000513965 SHROOM2Q13796 1616 aa20.07■□□□□ 0.8
COPG1-208ENST00000513965 NPM1P06748 294 aaKnown RBP eCLIP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms