RNA–Protein interactions for RNA: ENST00000513793.5

LINC02428-203, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 5 BASIC

Gene LINC02428, Length 438 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-203ENST00000513793 NISCHQ9Y2I1 1504 aa20.02■□□□□ 0.79
LINC02428-203ENST00000513793 CCDC180Q9P1Z9 1646 aa17.81■□□□□ 0.44
LINC02428-203ENST00000513793 ABCC9O60706 1549 aa17.62■□□□□ 0.41
LINC02428-203ENST00000513793 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
LINC02428-203ENST00000513793 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
LINC02428-203ENST00000513793 NACADO15069 1562 aa16.73■□□□□ 0.27
LINC02428-203ENST00000513793 ZCCHC6Q5VYS8 1495 aaKnown RBP16.65■□□□□ 0.26
LINC02428-203ENST00000513793 UNC13AQ9UPW8 1703 aa16.59■□□□□ 0.25
LINC02428-203ENST00000513793 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
LINC02428-203ENST00000513793 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC02428-203ENST00000513793 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
LINC02428-203ENST00000513793 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
LINC02428-203ENST00000513793 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
LINC02428-203ENST00000513793 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
LINC02428-203ENST00000513793 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
LINC02428-203ENST00000513793 CHIC1Q5VXU3 224 aa16.04■□□□□ 0.16
LINC02428-203ENST00000513793 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
LINC02428-203ENST00000513793 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
LINC02428-203ENST00000513793 CC2D2AQ9P2K1 1620 aa15.91■□□□□ 0.14
LINC02428-203ENST00000513793 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
LINC02428-203ENST00000513793 SMARCA4P51532 1647 aa15.58■□□□□ 0.09
LINC02428-203ENST00000513793 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
LINC02428-203ENST00000513793 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
LINC02428-203ENST00000513793 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
LINC02428-203ENST00000513793 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
LINC02428-203ENST00000513793 SMARCA2P51531 1590 aa15.42■□□□□ 0.06
LINC02428-203ENST00000513793 WIZO95785 1651 aa15.37■□□□□ 0.05
LINC02428-203ENST00000513793 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
LINC02428-203ENST00000513793 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
LINC02428-203ENST00000513793 BAZ1BQ9UIG0 1483 aaKnown RBP15.35■□□□□ 0.05
LINC02428-203ENST00000513793 NESP48681 1621 aa15.25■□□□□ 0.03
LINC02428-203ENST00000513793 RSF1Q96T23 1441 aaPredicted RBP15.24■□□□□ 0.03
LINC02428-203ENST00000513793 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
LINC02428-203ENST00000513793 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
LINC02428-203ENST00000513793 KIF21AQ7Z4S6 1674 aa15.08■□□□□ 0
LINC02428-203ENST00000513793 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
LINC02428-203ENST00000513793 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
LINC02428-203ENST00000513793 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
LINC02428-203ENST00000513793 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
LINC02428-203ENST00000513793 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
LINC02428-203ENST00000513793 CUX2O14529 1486 aa14.92□□□□□ -0.02
LINC02428-203ENST00000513793 CFTRP13569 1480 aa14.9□□□□□ -0.02
LINC02428-203ENST00000513793 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
LINC02428-203ENST00000513793 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
LINC02428-203ENST00000513793 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
LINC02428-203ENST00000513793 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
LINC02428-203ENST00000513793 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.03
LINC02428-203ENST00000513793 WDR62O43379 1518 aa14.8□□□□□ -0.04
LINC02428-203ENST00000513793 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
LINC02428-203ENST00000513793 TOPBP1Q92547 1522 aa14.64□□□□□ -0.07
LINC02428-203ENST00000513793 DNAJC5Q9H3Z4 198 aa14.62□□□□□ -0.07
LINC02428-203ENST00000513793 DNMBPQ6XZF7 1577 aa14.59□□□□□ -0.07
LINC02428-203ENST00000513793 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
LINC02428-203ENST00000513793 CUX1P39880 1505 aa14.53□□□□□ -0.08
LINC02428-203ENST00000513793 TARBP1Q13395 1621 aaKnown RBP14.51□□□□□ -0.09
LINC02428-203ENST00000513793 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
LINC02428-203ENST00000513793 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
LINC02428-203ENST00000513793 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
LINC02428-203ENST00000513793 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
LINC02428-203ENST00000513793 FGD5Q6ZNL6 1462 aa14.48□□□□□ -0.09
LINC02428-203ENST00000513793 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
LINC02428-203ENST00000513793 AQRO60306 1485 aaKnown RBP eCLIP14.45□□□□□ -0.1
LINC02428-203ENST00000513793 SOGA1O94964 1423 aa14.43□□□□□ -0.1
LINC02428-203ENST00000513793 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
LINC02428-203ENST00000513793 SYNJ1O43426 1573 aa14.4□□□□□ -0.1
LINC02428-203ENST00000513793 WDR97A6NE52 1622 aa14.39□□□□□ -0.11
LINC02428-203ENST00000513793 CHD1O14646 1710 aa14.37□□□□□ -0.11
LINC02428-203ENST00000513793 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
LINC02428-203ENST00000513793 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
LINC02428-203ENST00000513793 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
LINC02428-203ENST00000513793 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
LINC02428-203ENST00000513793 PBRM1Q86U86 1689 aa14.31□□□□□ -0.12
LINC02428-203ENST00000513793 FBLN2P98095 1184 aa14.3□□□□□ -0.12
LINC02428-203ENST00000513793 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
LINC02428-203ENST00000513793 ABCA5Q8WWZ7 1642 aa14.27□□□□□ -0.12
LINC02428-203ENST00000513793 ABCA10Q8WWZ4 1543 aa14.27□□□□□ -0.12
LINC02428-203ENST00000513793 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
LINC02428-203ENST00000513793 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
LINC02428-203ENST00000513793 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
LINC02428-203ENST00000513793 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
LINC02428-203ENST00000513793 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
LINC02428-203ENST00000513793 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
LINC02428-203ENST00000513793 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
LINC02428-203ENST00000513793 CHMP7Q8WUX9 453 aaPredicted RBP14.18□□□□□ -0.14
LINC02428-203ENST00000513793 SYNJ2O15056 1496 aa14.16□□□□□ -0.14
LINC02428-203ENST00000513793 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
LINC02428-203ENST00000513793 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
LINC02428-203ENST00000513793 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
LINC02428-203ENST00000513793 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
LINC02428-203ENST00000513793 GRIN2AQ12879 1464 aa14.09□□□□□ -0.15
LINC02428-203ENST00000513793 ERICH3Q5RHP9 1530 aa14.09□□□□□ -0.15
LINC02428-203ENST00000513793 CEP170Q5SW79 1584 aa14.08□□□□□ -0.16
LINC02428-203ENST00000513793 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
LINC02428-203ENST00000513793 CYB5RLQ6IPT4 315 aa14.04□□□□□ -0.16
LINC02428-203ENST00000513793 ARAP1Q96P48 1450 aa14.04□□□□□ -0.16
LINC02428-203ENST00000513793 RUSC2Q8N2Y8 1516 aa14.04□□□□□ -0.16
LINC02428-203ENST00000513793 ERCC6L2Q5T890 1561 aa14.03□□□□□ -0.16
LINC02428-203ENST00000513793 KIF27Q86VH2 1401 aa14.02□□□□□ -0.16
LINC02428-203ENST00000513793 IGF1RP08069 1367 aa14.02□□□□□ -0.17
LINC02428-203ENST00000513793 NUP160Q12769 1436 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms