RNA–Protein interactions for RNA: ENST00000513607.2

SLC6A18-202, Transcript of solute carrier family 6 member 18, humanhuman

TSL 3

Gene SLC6A18, Length 459 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18-202ENST00000513607 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
SLC6A18-202ENST00000513607 ABCC9O60706 1549 aa31.66■■■□□ 2.66
SLC6A18-202ENST00000513607 DNAJC5BQ9UF47 199 aa30.64■■■□□ 2.5
SLC6A18-202ENST00000513607 CCDC180Q9P1Z9 1646 aa30.51■■■□□ 2.47
SLC6A18-202ENST00000513607 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
SLC6A18-202ENST00000513607 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
SLC6A18-202ENST00000513607 NACADO15069 1562 aa29.16■■■□□ 2.26
SLC6A18-202ENST00000513607 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
SLC6A18-202ENST00000513607 UNC13AQ9UPW8 1703 aa28.82■■■□□ 2.2
SLC6A18-202ENST00000513607 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
SLC6A18-202ENST00000513607 DNAJC5Q9H3Z4 198 aa28.75■■■□□ 2.19
SLC6A18-202ENST00000513607 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
SLC6A18-202ENST00000513607 CC2D2AQ9P2K1 1620 aa28.46■■■□□ 2.15
SLC6A18-202ENST00000513607 MYO15BQ96JP2 1530 aa28.4■■■□□ 2.14
SLC6A18-202ENST00000513607 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
SLC6A18-202ENST00000513607 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
SLC6A18-202ENST00000513607 SCRIBQ14160 1630 aa27.89■■■□□ 2.05
SLC6A18-202ENST00000513607 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
SLC6A18-202ENST00000513607 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
SLC6A18-202ENST00000513607 CUX2O14529 1486 aa27.57■■■□□ 2
SLC6A18-202ENST00000513607 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
SLC6A18-202ENST00000513607 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
SLC6A18-202ENST00000513607 NCAPD3P42695 1498 aa27■■□□□ 1.91
SLC6A18-202ENST00000513607 NESP48681 1621 aa26.93■■□□□ 1.9
SLC6A18-202ENST00000513607 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
SLC6A18-202ENST00000513607 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
SLC6A18-202ENST00000513607 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
SLC6A18-202ENST00000513607 SMARCA2P51531 1590 aa26.59■■□□□ 1.85
SLC6A18-202ENST00000513607 BAZ1BQ9UIG0 1483 aaKnown RBP26.47■■□□□ 1.83
SLC6A18-202ENST00000513607 LAMC3Q9Y6N6 1575 aa26.46■■□□□ 1.83
SLC6A18-202ENST00000513607 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
SLC6A18-202ENST00000513607 PDS5BQ9NTI5 1447 aa26.43■■□□□ 1.82
SLC6A18-202ENST00000513607 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
SLC6A18-202ENST00000513607 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
SLC6A18-202ENST00000513607 MRC2Q9UBG0 1479 aa26.23■■□□□ 1.79
SLC6A18-202ENST00000513607 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
SLC6A18-202ENST00000513607 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
SLC6A18-202ENST00000513607 PEG3Q9GZU2 1588 aa26.17■■□□□ 1.78
SLC6A18-202ENST00000513607 WDR62O43379 1518 aa26.16■■□□□ 1.78
SLC6A18-202ENST00000513607 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
SLC6A18-202ENST00000513607 CEP164Q9UPV0 1460 aa25.95■■□□□ 1.74
SLC6A18-202ENST00000513607 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
SLC6A18-202ENST00000513607 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
SLC6A18-202ENST00000513607 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
SLC6A18-202ENST00000513607 FANCD2Q9BXW9 1451 aa25.86■■□□□ 1.73
SLC6A18-202ENST00000513607 TRHP20396 242 aaPredicted RBP25.83■■□□□ 1.73
SLC6A18-202ENST00000513607 CYB5RLQ6IPT4 315 aa25.8■■□□□ 1.72
SLC6A18-202ENST00000513607 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
SLC6A18-202ENST00000513607 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
SLC6A18-202ENST00000513607 URB2Q14146 1524 aaKnown RBP25.71■■□□□ 1.71
SLC6A18-202ENST00000513607 CFTRP13569 1480 aa25.64■■□□□ 1.69
SLC6A18-202ENST00000513607 WIZO95785 1651 aa25.61■■□□□ 1.69
SLC6A18-202ENST00000513607 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.68
SLC6A18-202ENST00000513607 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
SLC6A18-202ENST00000513607 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
SLC6A18-202ENST00000513607 FBLN2P98095 1184 aa25.36■■□□□ 1.65
SLC6A18-202ENST00000513607 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
SLC6A18-202ENST00000513607 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
SLC6A18-202ENST00000513607 AQRO60306 1485 aaKnown RBP eCLIP25.26■■□□□ 1.63
SLC6A18-202ENST00000513607 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
SLC6A18-202ENST00000513607 CHD1O14646 1710 aa25.22■■□□□ 1.63
SLC6A18-202ENST00000513607 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
SLC6A18-202ENST00000513607 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
SLC6A18-202ENST00000513607 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
SLC6A18-202ENST00000513607 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
SLC6A18-202ENST00000513607 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
SLC6A18-202ENST00000513607 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
SLC6A18-202ENST00000513607 TDRD9Q8NDG6 1382 aaKnown RBP24.98■■□□□ 1.59
SLC6A18-202ENST00000513607 CHMP7Q8WUX9 453 aaPredicted RBP24.97■■□□□ 1.59
SLC6A18-202ENST00000513607 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
SLC6A18-202ENST00000513607 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
SLC6A18-202ENST00000513607 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
SLC6A18-202ENST00000513607 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
SLC6A18-202ENST00000513607 SOGA1O94964 1423 aa24.86■■□□□ 1.57
SLC6A18-202ENST00000513607 SYNJ1O43426 1573 aa24.86■■□□□ 1.57
SLC6A18-202ENST00000513607 GAPVD1Q14C86 1478 aa24.85■■□□□ 1.57
SLC6A18-202ENST00000513607 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
SLC6A18-202ENST00000513607 ILDR1Q86SU0 546 aaPredicted RBP24.75■■□□□ 1.55
SLC6A18-202ENST00000513607 SYNJ2O15056 1496 aa24.71■■□□□ 1.55
SLC6A18-202ENST00000513607 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
SLC6A18-202ENST00000513607 FGD5Q6ZNL6 1462 aa24.66■■□□□ 1.54
SLC6A18-202ENST00000513607 WDR97A6NE52 1622 aa24.62■■□□□ 1.53
SLC6A18-202ENST00000513607 ERCC6L2Q5T890 1561 aa24.59■■□□□ 1.53
SLC6A18-202ENST00000513607 KDM4FA0A1W2PPD8 638 aa24.53■■□□□ 1.52
SLC6A18-202ENST00000513607 CUX1P39880 1505 aa24.48■■□□□ 1.51
SLC6A18-202ENST00000513607 FAM69CQ0P6D2 419 aa24.42■■□□□ 1.5
SLC6A18-202ENST00000513607 KIF13AQ9H1H9 1805 aa24.41■■□□□ 1.5
SLC6A18-202ENST00000513607 CEP170Q5SW79 1584 aa24.41■■□□□ 1.5
SLC6A18-202ENST00000513607 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
SLC6A18-202ENST00000513607 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
SLC6A18-202ENST00000513607 NUP160Q12769 1436 aa24.33■■□□□ 1.49
SLC6A18-202ENST00000513607 ABCC10Q5T3U5 1492 aa24.29■■□□□ 1.48
SLC6A18-202ENST00000513607 ABCA10Q8WWZ4 1543 aa24.29■■□□□ 1.48
SLC6A18-202ENST00000513607 ABCA5Q8WWZ7 1642 aa24.28■■□□□ 1.48
SLC6A18-202ENST00000513607 NPM1P06748 294 aaKnown RBP eCLIP24.25■■□□□ 1.47
SLC6A18-202ENST00000513607 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
SLC6A18-202ENST00000513607 PRG4Q92954 1404 aaPredicted RBP24.23■■□□□ 1.47
SLC6A18-202ENST00000513607 JPH4Q96JJ6 628 aa24.19■■□□□ 1.46
SLC6A18-202ENST00000513607 KDM6BO15054 1643 aa24.18■■□□□ 1.46
SLC6A18-202ENST00000513607 ADAMTS12P58397 1594 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms