RNA–Protein interactions for RNA: ENST00000513364.1

SEL1L3-209, Transcript of SEL1L family member 3, humanhuman

TSL 3

Gene SEL1L3, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-209ENST00000513364 NISCHQ9Y2I1 1504 aa57.45■■■■■ 6.79
SEL1L3-209ENST00000513364 CCDC180Q9P1Z9 1646 aa51.1■■■■■ 5.77
SEL1L3-209ENST00000513364 ABCC9O60706 1549 aa49.95■■■■■ 5.59
SEL1L3-209ENST00000513364 RB1CC1Q8TDY2 1594 aa48.08■■■■■ 5.29
SEL1L3-209ENST00000513364 NACADO15069 1562 aa48.03■■■■■ 5.28
SEL1L3-209ENST00000513364 DCAF8L2P0C7V8 631 aa47.91■■■■■ 5.26
SEL1L3-209ENST00000513364 ZCCHC6Q5VYS8 1495 aaKnown RBP47.88■■■■■ 5.26
SEL1L3-209ENST00000513364 MYO15BQ96JP2 1530 aa47.76■■■■■ 5.24
SEL1L3-209ENST00000513364 DCAF1Q9Y4B6 1507 aa47.56■■■■■ 5.2
SEL1L3-209ENST00000513364 UNC13AQ9UPW8 1703 aa46.97■■■■■ 5.11
SEL1L3-209ENST00000513364 PABPN1Q86U42 306 aaKnown RBP eCLIP46.64■■■■■ 5.06
SEL1L3-209ENST00000513364 BICRAQ9NZM4 1560 aa46.61■■■■■ 5.05
SEL1L3-209ENST00000513364 SCRIBQ14160 1630 aa46.61■■■■■ 5.05
SEL1L3-209ENST00000513364 SHROOM4Q9ULL8 1493 aa46.18■■■■■ 4.98
SEL1L3-209ENST00000513364 DNAJC5BQ9UF47 199 aa45.79■■■■■ 4.92
SEL1L3-209ENST00000513364 EIF4G1Q04637 1599 aaKnown RBP45.39■■■■■ 4.86
SEL1L3-209ENST00000513364 CC2D2AQ9P2K1 1620 aa45.19■■■■■ 4.83
SEL1L3-209ENST00000513364 CECR2Q9BXF3 1484 aa44.89■■■■■ 4.78
SEL1L3-209ENST00000513364 SMARCA4P51532 1647 aa44.59■■■■■ 4.73
SEL1L3-209ENST00000513364 BAZ1AQ9NRL2 1556 aaPredicted RBP44.54■■■■■ 4.72
SEL1L3-209ENST00000513364 ATAD2BQ9ULI0 1458 aa44.34■■■■■ 4.69
SEL1L3-209ENST00000513364 NCAPD3P42695 1498 aa44.31■■■■■ 4.68
SEL1L3-209ENST00000513364 SMARCA2P51531 1590 aa44.3■■■■■ 4.68
SEL1L3-209ENST00000513364 MROH2BQ7Z745 1585 aa44.26■■■■■ 4.68
SEL1L3-209ENST00000513364 PEG3Q9GZU2 1588 aa44.17■■■■■ 4.66
SEL1L3-209ENST00000513364 HMGXB3Q12766 1538 aa44.12■■■■■ 4.65
SEL1L3-209ENST00000513364 BAZ1BQ9UIG0 1483 aaKnown RBP43.98■■■■■ 4.63
SEL1L3-209ENST00000513364 WIZO95785 1651 aa43.78■■■■■ 4.6
SEL1L3-209ENST00000513364 RSF1Q96T23 1441 aaPredicted RBP43.77■■■■■ 4.6
SEL1L3-209ENST00000513364 TOP2AP11388 1531 aaKnown RBP43.36■■■■■ 4.53
SEL1L3-209ENST00000513364 NESP48681 1621 aa43.22■■■■■ 4.51
SEL1L3-209ENST00000513364 LAMC3Q9Y6N6 1575 aa43.15■■■■■ 4.5
SEL1L3-209ENST00000513364 ERCC6Q03468 1493 aa43.06■■■■■ 4.48
SEL1L3-209ENST00000513364 CADPSQ9ULU8 1353 aa43.01■■■■■ 4.48
SEL1L3-209ENST00000513364 PDS5BQ9NTI5 1447 aa42.85■■■■■ 4.45
SEL1L3-209ENST00000513364 CCDC88BA6NC98 1476 aa42.81■■■■■ 4.44
SEL1L3-209ENST00000513364 CFTRP13569 1480 aa42.77■■■■■ 4.44
SEL1L3-209ENST00000513364 KIF21AQ7Z4S6 1674 aa42.73■■■■■ 4.43
SEL1L3-209ENST00000513364 CUX2O14529 1486 aa42.62■■■■■ 4.41
SEL1L3-209ENST00000513364 SUPT5HO00267 1087 aaKnown RBP42.61■■■■■ 4.41
SEL1L3-209ENST00000513364 THOC2Q8NI27 1593 aaKnown RBP42.61■■■■■ 4.41
SEL1L3-209ENST00000513364 FANCD2Q9BXW9 1451 aa42.53■■■■■ 4.4
SEL1L3-209ENST00000513364 CEP164Q9UPV0 1460 aa42.49■■■■■ 4.39
SEL1L3-209ENST00000513364 PRDM2Q13029 1718 aa42.46■■■■■ 4.39
SEL1L3-209ENST00000513364 MRC2Q9UBG0 1479 aa42.43■■■■■ 4.38
SEL1L3-209ENST00000513364 WDR62O43379 1518 aa42.29■■■■■ 4.36
SEL1L3-209ENST00000513364 URB2Q14146 1524 aaKnown RBP42.1■■■■■ 4.33
SEL1L3-209ENST00000513364 TOPBP1Q92547 1522 aa41.85■■■■■ 4.29
SEL1L3-209ENST00000513364 ABCC8Q09428 1581 aa41.84■■■■■ 4.29
SEL1L3-209ENST00000513364 DNMBPQ6XZF7 1577 aa41.81■■■■■ 4.28
SEL1L3-209ENST00000513364 IFT140Q96RY7 1462 aa41.59■■■■■ 4.25
SEL1L3-209ENST00000513364 CUX1P39880 1505 aa41.54■■■■■ 4.24
SEL1L3-209ENST00000513364 POLA1P09884 1462 aaPredicted RBP41.49■■■■■ 4.23
SEL1L3-209ENST00000513364 FGD5Q6ZNL6 1462 aa41.4■■■■■ 4.22
SEL1L3-209ENST00000513364 TARBP1Q13395 1621 aaKnown RBP41.4■■■■■ 4.22
SEL1L3-209ENST00000513364 ZNF608Q9ULD9 1512 aaPredicted RBP41.39■■■■■ 4.22
SEL1L3-209ENST00000513364 SOGA1O94964 1423 aa41.3■■■■■ 4.2
SEL1L3-209ENST00000513364 RAD54L2Q9Y4B4 1467 aa41.29■■■■■ 4.2
SEL1L3-209ENST00000513364 WRNQ14191 1432 aaPredicted RBP eCLIP41.27■■■■■ 4.2
SEL1L3-209ENST00000513364 DNAJC5Q9H3Z4 198 aa41.25■■■■■ 4.19
SEL1L3-209ENST00000513364 EIF4G3O43432 1585 aaKnown RBP41.25■■■■■ 4.19
SEL1L3-209ENST00000513364 TOP2BQ02880 1626 aa41.19■■■■■ 4.18
SEL1L3-209ENST00000513364 BIVM-ERCC5R4GMW8 1640 aa41.19■■■■■ 4.18
SEL1L3-209ENST00000513364 SYNJ1O43426 1573 aa41.18■■■■■ 4.18
SEL1L3-209ENST00000513364 AQRO60306 1485 aaKnown RBP eCLIP41.14■■■■■ 4.181e-6■■■■□ 22.2
SEL1L3-209ENST00000513364 WDR97A6NE52 1622 aa41.11■■■■■ 4.17
SEL1L3-209ENST00000513364 TDRD9Q8NDG6 1382 aaKnown RBP41.06■■■■■ 4.16
SEL1L3-209ENST00000513364 ABCA10Q8WWZ4 1543 aa41.01■■■■■ 4.16
SEL1L3-209ENST00000513364 ABCA5Q8WWZ7 1642 aa40.85■■■■■ 4.13
SEL1L3-209ENST00000513364 GRIN2BQ13224 1484 aa40.84■■■■■ 4.13
SEL1L3-209ENST00000513364 GAPVD1Q14C86 1478 aa40.84■■■■■ 4.13
SEL1L3-209ENST00000513364 OSCARQ8IYS5 282 aa40.81■■■■■ 4.12
SEL1L3-209ENST00000513364 SNAPC4Q5SXM2 1469 aa40.79■■■■■ 4.12
SEL1L3-209ENST00000513364 PBRM1Q86U86 1689 aa40.77■■■■■ 4.12
SEL1L3-209ENST00000513364 MAGI1Q96QZ7 1491 aaPredicted RBP40.75■■■■■ 4.11
SEL1L3-209ENST00000513364 CHD1O14646 1710 aa40.71■■■■■ 4.11
SEL1L3-209ENST00000513364 FBLN2P98095 1184 aa40.61■■■■■ 4.09
SEL1L3-209ENST00000513364 SYNJ2O15056 1496 aa40.58■■■■■ 4.09
SEL1L3-209ENST00000513364 CHMP7Q8WUX9 453 aaPredicted RBP40.52■■■■■ 4.08
SEL1L3-209ENST00000513364 ERICH3Q5RHP9 1530 aa40.52■■■■■ 4.08
SEL1L3-209ENST00000513364 ADAMTS12P58397 1594 aa40.47■■■■■ 4.07
SEL1L3-209ENST00000513364 KIF27Q86VH2 1401 aa40.42■■■■■ 4.06
SEL1L3-209ENST00000513364 FHAD1B1AJZ9 1412 aa40.38■■■■■ 4.05
SEL1L3-209ENST00000513364 GRIN2AQ12879 1464 aa40.32■■■■■ 4.05
SEL1L3-209ENST00000513364 CLASP1Q7Z460 1538 aa40.29■■■■■ 4.04
SEL1L3-209ENST00000513364 TRIM41Q8WV44 630 aa40.26■■■■■ 4.04
SEL1L3-209ENST00000513364 IGF1RP08069 1367 aa40.23■■■■■ 4.03
SEL1L3-209ENST00000513364 ARHGEF11O15085 1522 aa40.19■■■■■ 4.02
SEL1L3-209ENST00000513364 RIMBP3CA6NJZ7 1639 aa40.18■■■■■ 4.02
SEL1L3-209ENST00000513364 RIMBP3BA6NNM3 1639 aa40.18■■■■■ 4.02
SEL1L3-209ENST00000513364 RIMBP3Q9UFD9 1639 aa40.18■■■■■ 4.02
SEL1L3-209ENST00000513364 CUL7Q14999 1698 aa40.16■■■■■ 4.02
SEL1L3-209ENST00000513364 NUP160Q12769 1436 aa40.15■■■■■ 4.02
SEL1L3-209ENST00000513364 CEP170Q5SW79 1584 aa40.12■■■■■ 4.01
SEL1L3-209ENST00000513364 RUSC2Q8N2Y8 1516 aa40.01■■■■■ 4
SEL1L3-209ENST00000513364 CARMIL1Q5VZK9 1371 aa39.99■■■■□ 3.99
SEL1L3-209ENST00000513364 ARAP1Q96P48 1450 aa39.88■■■■□ 3.97
SEL1L3-209ENST00000513364 SHROOM2Q13796 1616 aa39.84■■■■□ 3.97
SEL1L3-209ENST00000513364 CHIC1Q5VXU3 224 aa39.78■■■■□ 3.96
SEL1L3-209ENST00000513364 RAPGEF2Q9Y4G8 1499 aa39.77■■■■□ 3.96
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms