RNA–Protein interactions for RNA: ENST00000513080.5

SPOP-218, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-218ENST00000513080 NISCHQ9Y2I1 1504 aa35.63■■■■□ 3.29
SPOP-218ENST00000513080 CCDC180Q9P1Z9 1646 aa31.74■■■□□ 2.67
SPOP-218ENST00000513080 ABCC9O60706 1549 aa31.23■■■□□ 2.59
SPOP-218ENST00000513080 RB1CC1Q8TDY2 1594 aa29.96■■■□□ 2.39
SPOP-218ENST00000513080 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
SPOP-218ENST00000513080 NACADO15069 1562 aa29.88■■■□□ 2.37
SPOP-218ENST00000513080 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
SPOP-218ENST00000513080 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
SPOP-218ENST00000513080 DCAF1Q9Y4B6 1507 aa29.45■■■□□ 2.3
SPOP-218ENST00000513080 UNC13AQ9UPW8 1703 aa29.31■■■□□ 2.28
SPOP-218ENST00000513080 PABPN1Q86U42 306 aaKnown RBP eCLIP29.17■■■□□ 2.26
SPOP-218ENST00000513080 BICRAQ9NZM4 1560 aa29.05■■■□□ 2.24
SPOP-218ENST00000513080 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
SPOP-218ENST00000513080 DNAJC5BQ9UF47 199 aa28.81■■■□□ 2.2
SPOP-218ENST00000513080 SHROOM4Q9ULL8 1493 aa28.69■■■□□ 2.18
SPOP-218ENST00000513080 EIF4G1Q04637 1599 aaKnown RBP28.3■■■□□ 2.12
SPOP-218ENST00000513080 CC2D2AQ9P2K1 1620 aa28.24■■■□□ 2.11
SPOP-218ENST00000513080 CECR2Q9BXF3 1484 aa28.06■■■□□ 2.08
SPOP-218ENST00000513080 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
SPOP-218ENST00000513080 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
SPOP-218ENST00000513080 NCAPD3P42695 1498 aa27.57■■■□□ 2
SPOP-218ENST00000513080 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
SPOP-218ENST00000513080 SMARCA2P51531 1590 aa27.52■■■□□ 2
SPOP-218ENST00000513080 MROH2BQ7Z745 1585 aa27.48■■□□□ 1.99
SPOP-218ENST00000513080 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
SPOP-218ENST00000513080 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.98
SPOP-218ENST00000513080 BAZ1BQ9UIG0 1483 aaKnown RBP27.33■■□□□ 1.97
SPOP-218ENST00000513080 WIZO95785 1651 aa27.19■■□□□ 1.94
SPOP-218ENST00000513080 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
SPOP-218ENST00000513080 NESP48681 1621 aa26.98■■□□□ 1.91
SPOP-218ENST00000513080 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
SPOP-218ENST00000513080 LAMC3Q9Y6N6 1575 aa26.87■■□□□ 1.89
SPOP-218ENST00000513080 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
SPOP-218ENST00000513080 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
SPOP-218ENST00000513080 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
SPOP-218ENST00000513080 CUX2O14529 1486 aa26.66■■□□□ 1.86
SPOP-218ENST00000513080 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
SPOP-218ENST00000513080 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
SPOP-218ENST00000513080 CFTRP13569 1480 aa26.56■■□□□ 1.84
SPOP-218ENST00000513080 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
SPOP-218ENST00000513080 FANCD2Q9BXW9 1451 aa26.46■■□□□ 1.83
SPOP-218ENST00000513080 CEP164Q9UPV0 1460 aa26.44■■□□□ 1.82
SPOP-218ENST00000513080 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
SPOP-218ENST00000513080 PRDM2Q13029 1718 aa26.38■■□□□ 1.81
SPOP-218ENST00000513080 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
SPOP-218ENST00000513080 WDR62O43379 1518 aa26.34■■□□□ 1.81
SPOP-218ENST00000513080 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
SPOP-218ENST00000513080 URB2Q14146 1524 aaKnown RBP26.21■■□□□ 1.79
SPOP-218ENST00000513080 DNAJC5Q9H3Z4 198 aa26.05■■□□□ 1.76
SPOP-218ENST00000513080 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
SPOP-218ENST00000513080 ABCC8Q09428 1581 aa26.01■■□□□ 1.75
SPOP-218ENST00000513080 DNMBPQ6XZF7 1577 aa25.97■■□□□ 1.75
SPOP-218ENST00000513080 IFT140Q96RY7 1462 aa25.88■■□□□ 1.73
SPOP-218ENST00000513080 ZNF608Q9ULD9 1512 aaPredicted RBP25.8■■□□□ 1.72
SPOP-218ENST00000513080 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
SPOP-218ENST00000513080 CUX1P39880 1505 aa25.77■■□□□ 1.72
SPOP-218ENST00000513080 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
SPOP-218ENST00000513080 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
SPOP-218ENST00000513080 RAD54L2Q9Y4B4 1467 aa25.7■■□□□ 1.7
SPOP-218ENST00000513080 SOGA1O94964 1423 aa25.7■■□□□ 1.7
SPOP-218ENST00000513080 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
SPOP-218ENST00000513080 AQRO60306 1485 aaKnown RBP eCLIP25.64■■□□□ 1.691e-6■■■■■ 27.6
SPOP-218ENST00000513080 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
SPOP-218ENST00000513080 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
SPOP-218ENST00000513080 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
SPOP-218ENST00000513080 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
SPOP-218ENST00000513080 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
SPOP-218ENST00000513080 SYNJ1O43426 1573 aa25.51■■□□□ 1.67
SPOP-218ENST00000513080 TOP2BQ02880 1626 aa25.51■■□□□ 1.67
SPOP-218ENST00000513080 ABCA10Q8WWZ4 1543 aa25.44■■□□□ 1.66
SPOP-218ENST00000513080 CHD1O14646 1710 aa25.42■■□□□ 1.66
SPOP-218ENST00000513080 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
SPOP-218ENST00000513080 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
SPOP-218ENST00000513080 FBLN2P98095 1184 aa25.39■■□□□ 1.66
SPOP-218ENST00000513080 GAPVD1Q14C86 1478 aa25.39■■□□□ 1.65
SPOP-218ENST00000513080 SNAPC4Q5SXM2 1469 aa25.39■■□□□ 1.65
SPOP-218ENST00000513080 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
SPOP-218ENST00000513080 PBRM1Q86U86 1689 aa25.36■■□□□ 1.65
SPOP-218ENST00000513080 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
SPOP-218ENST00000513080 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
SPOP-218ENST00000513080 SYNJ2O15056 1496 aa25.24■■□□□ 1.63
SPOP-218ENST00000513080 RIMBP3CA6NJZ7 1639 aa25.17■■□□□ 1.62
SPOP-218ENST00000513080 RIMBP3BA6NNM3 1639 aa25.17■■□□□ 1.62
SPOP-218ENST00000513080 RIMBP3Q9UFD9 1639 aa25.17■■□□□ 1.62
SPOP-218ENST00000513080 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
SPOP-218ENST00000513080 ARHGEF11O15085 1522 aa25.14■■□□□ 1.62
SPOP-218ENST00000513080 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
SPOP-218ENST00000513080 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
SPOP-218ENST00000513080 CLASP1Q7Z460 1538 aa25.1■■□□□ 1.61
SPOP-218ENST00000513080 FHAD1B1AJZ9 1412 aa25.08■■□□□ 1.61
SPOP-218ENST00000513080 GRIN2AQ12879 1464 aa25.08■■□□□ 1.6
SPOP-218ENST00000513080 KIF27Q86VH2 1401 aa25.03■■□□□ 1.6
SPOP-218ENST00000513080 CEP170Q5SW79 1584 aa24.96■■□□□ 1.59
SPOP-218ENST00000513080 NUP160Q12769 1436 aa24.95■■□□□ 1.59
SPOP-218ENST00000513080 IGF1RP08069 1367 aa24.95■■□□□ 1.59
SPOP-218ENST00000513080 CYB5RLQ6IPT4 315 aa24.95■■□□□ 1.58
SPOP-218ENST00000513080 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
SPOP-218ENST00000513080 CUL7Q14999 1698 aa24.89■■□□□ 1.58
SPOP-218ENST00000513080 CARMIL1Q5VZK9 1371 aa24.8■■□□□ 1.56
SPOP-218ENST00000513080 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms