RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
PFDN1-205ENST00000512925 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
PFDN1-205ENST00000512925 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
PFDN1-205ENST00000512925 ABCC9O60706 1549 aa24.48■■□□□ 1.51
PFDN1-205ENST00000512925 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
PFDN1-205ENST00000512925 DNAJC5BQ9UF47 199 aa23.44■■□□□ 1.34
PFDN1-205ENST00000512925 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
PFDN1-205ENST00000512925 NACADO15069 1562 aa22.84■■□□□ 1.25
PFDN1-205ENST00000512925 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
PFDN1-205ENST00000512925 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
PFDN1-205ENST00000512925 UNC13AQ9UPW8 1703 aa22.52■■□□□ 1.2
PFDN1-205ENST00000512925 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
PFDN1-205ENST00000512925 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
PFDN1-205ENST00000512925 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
PFDN1-205ENST00000512925 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
PFDN1-205ENST00000512925 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
PFDN1-205ENST00000512925 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
PFDN1-205ENST00000512925 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
PFDN1-205ENST00000512925 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
PFDN1-205ENST00000512925 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
PFDN1-205ENST00000512925 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
PFDN1-205ENST00000512925 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
PFDN1-205ENST00000512925 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
PFDN1-205ENST00000512925 CUX2O14529 1486 aa21.24■□□□□ 0.99
PFDN1-205ENST00000512925 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
PFDN1-205ENST00000512925 ERCC6Q03468 1493 aa21.12■□□□□ 0.97
PFDN1-205ENST00000512925 ATAD2BQ9ULI0 1458 aa21.02■□□□□ 0.96
PFDN1-205ENST00000512925 NESP48681 1621 aa20.94■□□□□ 0.94
PFDN1-205ENST00000512925 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
PFDN1-205ENST00000512925 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
PFDN1-205ENST00000512925 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
PFDN1-205ENST00000512925 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
PFDN1-205ENST00000512925 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
PFDN1-205ENST00000512925 BAZ1AQ9NRL2 1556 aaPredicted RBP20.69■□□□□ 0.9
PFDN1-205ENST00000512925 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
PFDN1-205ENST00000512925 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
PFDN1-205ENST00000512925 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
PFDN1-205ENST00000512925 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
PFDN1-205ENST00000512925 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
PFDN1-205ENST00000512925 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
PFDN1-205ENST00000512925 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
PFDN1-205ENST00000512925 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
PFDN1-205ENST00000512925 WDR62O43379 1518 aa20.4■□□□□ 0.86
PFDN1-205ENST00000512925 FOXD1Q16676 465 aa20.34■□□□□ 0.85
PFDN1-205ENST00000512925 WIZO95785 1651 aa20.26■□□□□ 0.83
PFDN1-205ENST00000512925 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
PFDN1-205ENST00000512925 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
PFDN1-205ENST00000512925 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
PFDN1-205ENST00000512925 CFTRP13569 1480 aa20.17■□□□□ 0.82
PFDN1-205ENST00000512925 URB2Q14146 1524 aaKnown RBP20.11■□□□□ 0.81
PFDN1-205ENST00000512925 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
PFDN1-205ENST00000512925 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
PFDN1-205ENST00000512925 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
PFDN1-205ENST00000512925 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
PFDN1-205ENST00000512925 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
PFDN1-205ENST00000512925 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
PFDN1-205ENST00000512925 ARHGEF11O15085 1522 aa19.89■□□□□ 0.77
PFDN1-205ENST00000512925 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
PFDN1-205ENST00000512925 CYB5RLQ6IPT4 315 aa19.81■□□□□ 0.76
PFDN1-205ENST00000512925 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
PFDN1-205ENST00000512925 TOPBP1Q92547 1522 aa19.8■□□□□ 0.76
PFDN1-205ENST00000512925 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
PFDN1-205ENST00000512925 PRDM2Q13029 1718 aa19.78■□□□□ 0.76
PFDN1-205ENST00000512925 EIF4G3O43432 1585 aaKnown RBP19.73■□□□□ 0.75
PFDN1-205ENST00000512925 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
PFDN1-205ENST00000512925 AQRO60306 1485 aaKnown RBP eCLIP19.7■□□□□ 0.74
PFDN1-205ENST00000512925 ARAP1Q96P48 1450 aa19.69■□□□□ 0.74
PFDN1-205ENST00000512925 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
PFDN1-205ENST00000512925 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
PFDN1-205ENST00000512925 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
PFDN1-205ENST00000512925 CHD1O14646 1710 aa19.62■□□□□ 0.73
PFDN1-205ENST00000512925 FBLN2P98095 1184 aa19.62■□□□□ 0.73
PFDN1-205ENST00000512925 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.72
PFDN1-205ENST00000512925 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
PFDN1-205ENST00000512925 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
PFDN1-205ENST00000512925 SOGA1O94964 1423 aa19.5■□□□□ 0.71
PFDN1-205ENST00000512925 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
PFDN1-205ENST00000512925 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
PFDN1-205ENST00000512925 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
PFDN1-205ENST00000512925 FGD5Q6ZNL6 1462 aa19.39■□□□□ 0.69
PFDN1-205ENST00000512925 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
PFDN1-205ENST00000512925 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
PFDN1-205ENST00000512925 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
PFDN1-205ENST00000512925 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
PFDN1-205ENST00000512925 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
PFDN1-205ENST00000512925 CUX1P39880 1505 aa19.32■□□□□ 0.68
PFDN1-205ENST00000512925 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
PFDN1-205ENST00000512925 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
PFDN1-205ENST00000512925 ADRA2BP18089 450 aa19.24■□□□□ 0.67
PFDN1-205ENST00000512925 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
PFDN1-205ENST00000512925 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
PFDN1-205ENST00000512925 ERCC6L2Q5T890 1561 aa19.16■□□□□ 0.66
PFDN1-205ENST00000512925 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.65
PFDN1-205ENST00000512925 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
PFDN1-205ENST00000512925 NUP160Q12769 1436 aa19.08■□□□□ 0.64
PFDN1-205ENST00000512925 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
PFDN1-205ENST00000512925 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
PFDN1-205ENST00000512925 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
PFDN1-205ENST00000512925 SHROOM2Q13796 1616 aa19■□□□□ 0.63
PFDN1-205ENST00000512925 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms