RNA–Protein interactions for RNA: ENST00000512877.1

MRPL3-210, Transcript of mitochondrial ribosomal protein L3, humanhuman

TSL 3

Gene MRPL3, Length 659 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3-210ENST00000512877 NISCHQ9Y2I1 1504 aa44.82■■■■■ 4.77
MRPL3-210ENST00000512877 ABCC9O60706 1549 aa40.51■■■■■ 4.08
MRPL3-210ENST00000512877 CCDC180Q9P1Z9 1646 aa40.49■■■■■ 4.07
MRPL3-210ENST00000512877 RB1CC1Q8TDY2 1594 aa38.55■■■■□ 3.76
MRPL3-210ENST00000512877 NACADO15069 1562 aa38.19■■■■□ 3.7
MRPL3-210ENST00000512877 DNAJC5BQ9UF47 199 aa38.03■■■■□ 3.68
MRPL3-210ENST00000512877 UNC13AQ9UPW8 1703 aa37.87■■■■□ 3.65
MRPL3-210ENST00000512877 DCAF8L2P0C7V8 631 aa37.82■■■■□ 3.64
MRPL3-210ENST00000512877 PABPN1Q86U42 306 aaKnown RBP eCLIP37.58■■■■□ 3.61
MRPL3-210ENST00000512877 MYO15BQ96JP2 1530 aa37.56■■■■□ 3.6
MRPL3-210ENST00000512877 BICRAQ9NZM4 1560 aa37.41■■■■□ 3.58
MRPL3-210ENST00000512877 ZCCHC6Q5VYS8 1495 aaKnown RBP37.13■■■■□ 3.53
MRPL3-210ENST00000512877 DCAF1Q9Y4B6 1507 aa37.01■■■■□ 3.52
MRPL3-210ENST00000512877 SHROOM4Q9ULL8 1493 aa36.86■■■■□ 3.49
MRPL3-210ENST00000512877 SCRIBQ14160 1630 aa36.82■■■■□ 3.49
MRPL3-210ENST00000512877 CC2D2AQ9P2K1 1620 aa36.66■■■■□ 3.46
MRPL3-210ENST00000512877 EIF4G1Q04637 1599 aaKnown RBP36.51■■■■□ 3.44
MRPL3-210ENST00000512877 CECR2Q9BXF3 1484 aa36.5■■■■□ 3.43
MRPL3-210ENST00000512877 AEBP2Q6ZN18 517 aaPredicted RBP35.27■■■■□ 3.24
MRPL3-210ENST00000512877 NCAPD3P42695 1498 aa35.17■■■■□ 3.22
MRPL3-210ENST00000512877 SMARCA4P51532 1647 aa35.1■■■■□ 3.21
MRPL3-210ENST00000512877 DNAJC5Q9H3Z4 198 aa35.08■■■■□ 3.21
MRPL3-210ENST00000512877 ATAD2BQ9ULI0 1458 aa35.06■■■■□ 3.2
MRPL3-210ENST00000512877 SMARCA2P51531 1590 aa35.03■■■■□ 3.2
MRPL3-210ENST00000512877 ERCC6Q03468 1493 aa35.01■■■■□ 3.19
MRPL3-210ENST00000512877 CUX2O14529 1486 aa35■■■■□ 3.19
MRPL3-210ENST00000512877 HMGXB3Q12766 1538 aa35■■■■□ 3.19
MRPL3-210ENST00000512877 BAZ1AQ9NRL2 1556 aaPredicted RBP34.85■■■■□ 3.17
MRPL3-210ENST00000512877 BAZ1BQ9UIG0 1483 aaKnown RBP34.77■■■■□ 3.16
MRPL3-210ENST00000512877 NESP48681 1621 aa34.75■■■■□ 3.15
MRPL3-210ENST00000512877 PEG3Q9GZU2 1588 aa34.71■■■■□ 3.15
MRPL3-210ENST00000512877 MROH2BQ7Z745 1585 aa34.54■■■■□ 3.12
MRPL3-210ENST00000512877 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
MRPL3-210ENST00000512877 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
MRPL3-210ENST00000512877 KIF21AQ7Z4S6 1674 aa34.47■■■■□ 3.11
MRPL3-210ENST00000512877 PDS5BQ9NTI5 1447 aa34.24■■■■□ 3.07
MRPL3-210ENST00000512877 WIZO95785 1651 aa34.22■■■■□ 3.07
MRPL3-210ENST00000512877 CHIC1Q5VXU3 224 aa34.2■■■■□ 3.07
MRPL3-210ENST00000512877 CADPSQ9ULU8 1353 aa34.07■■■■□ 3.04
MRPL3-210ENST00000512877 MRC2Q9UBG0 1479 aa34.01■■■■□ 3.03
MRPL3-210ENST00000512877 WDR62O43379 1518 aa33.96■■■■□ 3.03
MRPL3-210ENST00000512877 CEP164Q9UPV0 1460 aa33.85■■■■□ 3.01
MRPL3-210ENST00000512877 FANCD2Q9BXW9 1451 aa33.76■■■□□ 2.99
MRPL3-210ENST00000512877 TOP2AP11388 1531 aaKnown RBP33.72■■■□□ 2.99
MRPL3-210ENST00000512877 RSF1Q96T23 1441 aaPredicted RBP33.69■■■□□ 2.98
MRPL3-210ENST00000512877 CFTRP13569 1480 aa33.69■■■□□ 2.98
MRPL3-210ENST00000512877 PRDM2Q13029 1718 aa33.66■■■□□ 2.98
MRPL3-210ENST00000512877 TRIM41Q8WV44 630 aa33.52■■■□□ 2.96
MRPL3-210ENST00000512877 URB2Q14146 1524 aaKnown RBP33.5■■■□□ 2.95
MRPL3-210ENST00000512877 CCDC88BA6NC98 1476 aa33.26■■■□□ 2.92
MRPL3-210ENST00000512877 OSCARQ8IYS5 282 aa33.26■■■□□ 2.91
MRPL3-210ENST00000512877 IFT140Q96RY7 1462 aa33.13■■■□□ 2.89
MRPL3-210ENST00000512877 TOPBP1Q92547 1522 aa33.12■■■□□ 2.89
MRPL3-210ENST00000512877 ZNF608Q9ULD9 1512 aaPredicted RBP33.11■■■□□ 2.89
MRPL3-210ENST00000512877 RIMBP3CA6NJZ7 1639 aa33.05■■■□□ 2.88
MRPL3-210ENST00000512877 RIMBP3BA6NNM3 1639 aa33.05■■■□□ 2.88
MRPL3-210ENST00000512877 RIMBP3Q9UFD9 1639 aa33.05■■■□□ 2.88
MRPL3-210ENST00000512877 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
MRPL3-210ENST00000512877 DNMBPQ6XZF7 1577 aa33.03■■■□□ 2.88
MRPL3-210ENST00000512877 ABCC8Q09428 1581 aa33.01■■■□□ 2.88
MRPL3-210ENST00000512877 CHD1O14646 1710 aa32.92■■■□□ 2.86
MRPL3-210ENST00000512877 TARBP1Q13395 1621 aaKnown RBP32.9■■■□□ 2.86
MRPL3-210ENST00000512877 ARHGEF11O15085 1522 aa32.86■■■□□ 2.85
MRPL3-210ENST00000512877 AQRO60306 1485 aaKnown RBP eCLIP32.75■■■□□ 2.832e-8■■■■■ 42.3
MRPL3-210ENST00000512877 POLA1P09884 1462 aaPredicted RBP32.75■■■□□ 2.83
MRPL3-210ENST00000512877 RAD54L2Q9Y4B4 1467 aa32.61■■■□□ 2.81
MRPL3-210ENST00000512877 WDR97A6NE52 1622 aa32.56■■■□□ 2.8
MRPL3-210ENST00000512877 SOGA1O94964 1423 aa32.55■■■□□ 2.8
MRPL3-210ENST00000512877 FBLN2P98095 1184 aa32.55■■■□□ 2.8
MRPL3-210ENST00000512877 FGD5Q6ZNL6 1462 aa32.54■■■□□ 2.8
MRPL3-210ENST00000512877 CYB5RLQ6IPT4 315 aa32.51■■■□□ 2.79
MRPL3-210ENST00000512877 ARAP1Q96P48 1450 aa32.49■■■□□ 2.79
MRPL3-210ENST00000512877 TDRD9Q8NDG6 1382 aaKnown RBP32.49■■■□□ 2.79
MRPL3-210ENST00000512877 CUX1P39880 1505 aa32.48■■■□□ 2.79
MRPL3-210ENST00000512877 SNAPC4Q5SXM2 1469 aa32.48■■■□□ 2.79
MRPL3-210ENST00000512877 PBRM1Q86U86 1689 aa32.4■■■□□ 2.78
MRPL3-210ENST00000512877 CLASP1Q7Z460 1538 aa32.39■■■□□ 2.78
MRPL3-210ENST00000512877 SYNJ1O43426 1573 aa32.38■■■□□ 2.77
MRPL3-210ENST00000512877 MAGI1Q96QZ7 1491 aaPredicted RBP32.37■■■□□ 2.77
MRPL3-210ENST00000512877 GRIN2BQ13224 1484 aa32.33■■■□□ 2.77
MRPL3-210ENST00000512877 CHMP7Q8WUX9 453 aaPredicted RBP32.26■■■□□ 2.75
MRPL3-210ENST00000512877 SYNJ2O15056 1496 aa32.26■■■□□ 2.75
MRPL3-210ENST00000512877 TRHP20396 242 aaPredicted RBP32.24■■■□□ 2.75
MRPL3-210ENST00000512877 ABCA5Q8WWZ7 1642 aa32.21■■■□□ 2.75
MRPL3-210ENST00000512877 GAPVD1Q14C86 1478 aa32.19■■■□□ 2.74
MRPL3-210ENST00000512877 ABCA10Q8WWZ4 1543 aa32.13■■■□□ 2.73
MRPL3-210ENST00000512877 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
MRPL3-210ENST00000512877 BIVM-ERCC5R4GMW8 1640 aa32.01■■■□□ 2.72
MRPL3-210ENST00000512877 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
MRPL3-210ENST00000512877 TOP2BQ02880 1626 aa31.95■■■□□ 2.71
MRPL3-210ENST00000512877 GRIN2AQ12879 1464 aa31.94■■■□□ 2.7
MRPL3-210ENST00000512877 WRNQ14191 1432 aaPredicted RBP eCLIP31.93■■■□□ 2.7
MRPL3-210ENST00000512877 CEP170Q5SW79 1584 aa31.88■■■□□ 2.69
MRPL3-210ENST00000512877 ERCC6L2Q5T890 1561 aa31.87■■■□□ 2.69
MRPL3-210ENST00000512877 SHROOM2Q13796 1616 aa31.8■■■□□ 2.68
MRPL3-210ENST00000512877 NUP160Q12769 1436 aa31.8■■■□□ 2.68
MRPL3-210ENST00000512877 ERICH3Q5RHP9 1530 aa31.76■■■□□ 2.68
MRPL3-210ENST00000512877 FHAD1B1AJZ9 1412 aa31.75■■■□□ 2.67
MRPL3-210ENST00000512877 KIF13AQ9H1H9 1805 aa31.58■■■□□ 2.65
MRPL3-210ENST00000512877 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms