RNA–Protein interactions for RNA: ENST00000512846.2

CCNL2P1-201, Transcript of cyclin L2 pseudogene 1, humanhuman

BASIC

Gene CCNL2P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL2P1-201ENST00000512846 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
CCNL2P1-201ENST00000512846 ABCC9O60706 1549 aa28.43■■■□□ 2.14
CCNL2P1-201ENST00000512846 CCDC180Q9P1Z9 1646 aa28■■■□□ 2.07
CCNL2P1-201ENST00000512846 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
CCNL2P1-201ENST00000512846 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
CCNL2P1-201ENST00000512846 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
CCNL2P1-201ENST00000512846 NACADO15069 1562 aa26.59■■□□□ 1.85
CCNL2P1-201ENST00000512846 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.83
CCNL2P1-201ENST00000512846 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
CCNL2P1-201ENST00000512846 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
CCNL2P1-201ENST00000512846 BICRAQ9NZM4 1560 aa26.02■■□□□ 1.76
CCNL2P1-201ENST00000512846 ZCCHC6Q5VYS8 1495 aaKnown RBP25.76■■□□□ 1.71
CCNL2P1-201ENST00000512846 SHROOM4Q9ULL8 1493 aa25.71■■□□□ 1.71
CCNL2P1-201ENST00000512846 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
CCNL2P1-201ENST00000512846 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
CCNL2P1-201ENST00000512846 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
CCNL2P1-201ENST00000512846 CC2D2AQ9P2K1 1620 aa25.57■■□□□ 1.68
CCNL2P1-201ENST00000512846 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
CCNL2P1-201ENST00000512846 DNAJC5Q9H3Z4 198 aa24.89■■□□□ 1.58
CCNL2P1-201ENST00000512846 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
CCNL2P1-201ENST00000512846 CUX2O14529 1486 aa24.58■■□□□ 1.52
CCNL2P1-201ENST00000512846 NCAPD3P42695 1498 aa24.58■■□□□ 1.52
CCNL2P1-201ENST00000512846 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
CCNL2P1-201ENST00000512846 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
CCNL2P1-201ENST00000512846 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
CCNL2P1-201ENST00000512846 SMARCA4P51532 1647 aa24.34■■□□□ 1.49
CCNL2P1-201ENST00000512846 NESP48681 1621 aa24.29■■□□□ 1.48
CCNL2P1-201ENST00000512846 BAZ1BQ9UIG0 1483 aaKnown RBP24.27■■□□□ 1.48
CCNL2P1-201ENST00000512846 BAZ1AQ9NRL2 1556 aaPredicted RBP24.22■■□□□ 1.47
CCNL2P1-201ENST00000512846 PEG3Q9GZU2 1588 aa24.07■■□□□ 1.44
CCNL2P1-201ENST00000512846 LAMC3Q9Y6N6 1575 aa24.05■■□□□ 1.44
CCNL2P1-201ENST00000512846 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
CCNL2P1-201ENST00000512846 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
CCNL2P1-201ENST00000512846 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
CCNL2P1-201ENST00000512846 KIF21AQ7Z4S6 1674 aa23.87■■□□□ 1.41
CCNL2P1-201ENST00000512846 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
CCNL2P1-201ENST00000512846 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
CCNL2P1-201ENST00000512846 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
CCNL2P1-201ENST00000512846 WDR62O43379 1518 aa23.69■■□□□ 1.38
CCNL2P1-201ENST00000512846 WIZO95785 1651 aa23.67■■□□□ 1.38
CCNL2P1-201ENST00000512846 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
CCNL2P1-201ENST00000512846 FANCD2Q9BXW9 1451 aa23.6■■□□□ 1.37
CCNL2P1-201ENST00000512846 CFTRP13569 1480 aa23.49■■□□□ 1.35
CCNL2P1-201ENST00000512846 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
CCNL2P1-201ENST00000512846 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
CCNL2P1-201ENST00000512846 TOP2AP11388 1531 aaKnown RBP23.39■■□□□ 1.34
CCNL2P1-201ENST00000512846 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
CCNL2P1-201ENST00000512846 IFT140Q96RY7 1462 aa23.19■■□□□ 1.3
CCNL2P1-201ENST00000512846 ZNF608Q9ULD9 1512 aaPredicted RBP23.16■■□□□ 1.3
CCNL2P1-201ENST00000512846 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
CCNL2P1-201ENST00000512846 TOPBP1Q92547 1522 aa23.08■■□□□ 1.29
CCNL2P1-201ENST00000512846 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.29
CCNL2P1-201ENST00000512846 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.29
CCNL2P1-201ENST00000512846 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.29
CCNL2P1-201ENST00000512846 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
CCNL2P1-201ENST00000512846 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
CCNL2P1-201ENST00000512846 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
CCNL2P1-201ENST00000512846 FBLN2P98095 1184 aa22.98■■□□□ 1.27
CCNL2P1-201ENST00000512846 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
CCNL2P1-201ENST00000512846 CYB5RLQ6IPT4 315 aa22.97■■□□□ 1.27
CCNL2P1-201ENST00000512846 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
CCNL2P1-201ENST00000512846 AQRO60306 1485 aaKnown RBP eCLIP22.94■■□□□ 1.26
CCNL2P1-201ENST00000512846 TRHP20396 242 aaPredicted RBP22.87■■□□□ 1.25
CCNL2P1-201ENST00000512846 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
CCNL2P1-201ENST00000512846 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
CCNL2P1-201ENST00000512846 TDRD9Q8NDG6 1382 aaKnown RBP22.79■■□□□ 1.24
CCNL2P1-201ENST00000512846 CHD1O14646 1710 aa22.79■■□□□ 1.24
CCNL2P1-201ENST00000512846 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
CCNL2P1-201ENST00000512846 SOGA1O94964 1423 aa22.78■■□□□ 1.24
CCNL2P1-201ENST00000512846 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
CCNL2P1-201ENST00000512846 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
CCNL2P1-201ENST00000512846 SNAPC4Q5SXM2 1469 aa22.7■■□□□ 1.22
CCNL2P1-201ENST00000512846 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
CCNL2P1-201ENST00000512846 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
CCNL2P1-201ENST00000512846 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
CCNL2P1-201ENST00000512846 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
CCNL2P1-201ENST00000512846 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
CCNL2P1-201ENST00000512846 CUX1P39880 1505 aa22.57■■□□□ 1.2
CCNL2P1-201ENST00000512846 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
CCNL2P1-201ENST00000512846 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
CCNL2P1-201ENST00000512846 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
CCNL2P1-201ENST00000512846 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
CCNL2P1-201ENST00000512846 ABCA10Q8WWZ4 1543 aa22.37■■□□□ 1.17
CCNL2P1-201ENST00000512846 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
CCNL2P1-201ENST00000512846 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
CCNL2P1-201ENST00000512846 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
CCNL2P1-201ENST00000512846 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
CCNL2P1-201ENST00000512846 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
CCNL2P1-201ENST00000512846 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
CCNL2P1-201ENST00000512846 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
CCNL2P1-201ENST00000512846 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
CCNL2P1-201ENST00000512846 NUP160Q12769 1436 aa22.2■■□□□ 1.14
CCNL2P1-201ENST00000512846 CEP170Q5SW79 1584 aa22.18■■□□□ 1.14
CCNL2P1-201ENST00000512846 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
CCNL2P1-201ENST00000512846 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
CCNL2P1-201ENST00000512846 PRG4Q92954 1404 aaPredicted RBP22.08■■□□□ 1.13
CCNL2P1-201ENST00000512846 BIVM-ERCC5R4GMW8 1640 aa22.08■■□□□ 1.13
CCNL2P1-201ENST00000512846 SHROOM2Q13796 1616 aa22.06■■□□□ 1.12
CCNL2P1-201ENST00000512846 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
CCNL2P1-201ENST00000512846 NPM1P06748 294 aaKnown RBP eCLIP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms