RNA–Protein interactions for RNA: ENST00000512445.5

SRPK1-212, Transcript of SRSF protein kinase 1, humanhuman

TSL 5

Gene SRPK1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-212ENST00000512445 NISCHQ9Y2I1 1504 aa15.91■□□□□ 0.14
SRPK1-212ENST00000512445 AEBP2Q6ZN18 517 aaPredicted RBP14.57□□□□□ -0.08
SRPK1-212ENST00000512445 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
SRPK1-212ENST00000512445 ABCC9O60706 1549 aa14.1□□□□□ -0.15
SRPK1-212ENST00000512445 CCDC180Q9P1Z9 1646 aa14.04□□□□□ -0.16
SRPK1-212ENST00000512445 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
SRPK1-212ENST00000512445 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
SRPK1-212ENST00000512445 NACADO15069 1562 aa13.3□□□□□ -0.28
SRPK1-212ENST00000512445 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRPK1-212ENST00000512445 ZCCHC6Q5VYS8 1495 aaKnown RBP13.2□□□□□ -0.3
SRPK1-212ENST00000512445 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
SRPK1-212ENST00000512445 DNAJC5BQ9UF47 199 aa13.09□□□□□ -0.31
SRPK1-212ENST00000512445 DCAF1Q9Y4B6 1507 aa13.04□□□□□ -0.32
SRPK1-212ENST00000512445 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
SRPK1-212ENST00000512445 UNC13AQ9UPW8 1703 aa13.01□□□□□ -0.33
SRPK1-212ENST00000512445 BICRAQ9NZM4 1560 aa12.97□□□□□ -0.33
SRPK1-212ENST00000512445 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
SRPK1-212ENST00000512445 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
SRPK1-212ENST00000512445 EIF4G1Q04637 1599 aaKnown RBP12.65□□□□□ -0.38
SRPK1-212ENST00000512445 CC2D2AQ9P2K1 1620 aa12.65□□□□□ -0.38
SRPK1-212ENST00000512445 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
SRPK1-212ENST00000512445 ATAD2BQ9ULI0 1458 aa12.35□□□□□ -0.43
SRPK1-212ENST00000512445 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
SRPK1-212ENST00000512445 MROH2BQ7Z745 1585 aa12.31□□□□□ -0.44
SRPK1-212ENST00000512445 BAZ1AQ9NRL2 1556 aaPredicted RBP12.31□□□□□ -0.44
SRPK1-212ENST00000512445 NCAPD3P42695 1498 aa12.31□□□□□ -0.44
SRPK1-212ENST00000512445 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
SRPK1-212ENST00000512445 BAZ1BQ9UIG0 1483 aaKnown RBP12.26□□□□□ -0.45
SRPK1-212ENST00000512445 SENP3Q9H4L4 574 aaPredicted RBP12.19□□□□□ -0.46
SRPK1-212ENST00000512445 HMGXB3Q12766 1538 aa12.18□□□□□ -0.46
SRPK1-212ENST00000512445 NESP48681 1621 aa12.17□□□□□ -0.46
SRPK1-212ENST00000512445 WIZO95785 1651 aa12.16□□□□□ -0.46
SRPK1-212ENST00000512445 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
SRPK1-212ENST00000512445 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
SRPK1-212ENST00000512445 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
SRPK1-212ENST00000512445 CADPSQ9ULU8 1353 aa12.02□□□□□ -0.49
SRPK1-212ENST00000512445 SUPT5HO00267 1087 aaKnown RBP11.99□□□□□ -0.49
SRPK1-212ENST00000512445 TOP2AP11388 1531 aaKnown RBP11.97□□□□□ -0.49
SRPK1-212ENST00000512445 PDS5BQ9NTI5 1447 aa11.97□□□□□ -0.49
SRPK1-212ENST00000512445 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.49
SRPK1-212ENST00000512445 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
SRPK1-212ENST00000512445 CUX2O14529 1486 aa11.92□□□□□ -0.5
SRPK1-212ENST00000512445 KIF21AQ7Z4S6 1674 aa11.9□□□□□ -0.5
SRPK1-212ENST00000512445 FANCD2Q9BXW9 1451 aa11.88□□□□□ -0.51
SRPK1-212ENST00000512445 CFTRP13569 1480 aa11.87□□□□□ -0.51
SRPK1-212ENST00000512445 THOC2Q8NI27 1593 aaKnown RBP11.85□□□□□ -0.51
SRPK1-212ENST00000512445 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
SRPK1-212ENST00000512445 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
SRPK1-212ENST00000512445 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
SRPK1-212ENST00000512445 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
SRPK1-212ENST00000512445 URB2Q14146 1524 aaKnown RBP11.76□□□□□ -0.53
SRPK1-212ENST00000512445 WDR62O43379 1518 aa11.75□□□□□ -0.53
SRPK1-212ENST00000512445 TOPBP1Q92547 1522 aa11.65□□□□□ -0.54
SRPK1-212ENST00000512445 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
SRPK1-212ENST00000512445 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
SRPK1-212ENST00000512445 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
SRPK1-212ENST00000512445 IFT140Q96RY7 1462 aa11.59□□□□□ -0.55
SRPK1-212ENST00000512445 RAD54L2Q9Y4B4 1467 aa11.59□□□□□ -0.55
SRPK1-212ENST00000512445 ABCC8Q09428 1581 aa11.58□□□□□ -0.55
SRPK1-212ENST00000512445 FBLN2P98095 1184 aa11.58□□□□□ -0.56
SRPK1-212ENST00000512445 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.563e-8■■□□□ 14
SRPK1-212ENST00000512445 TDRD9Q8NDG6 1382 aaKnown RBP11.57□□□□□ -0.56
SRPK1-212ENST00000512445 SOGA1O94964 1423 aa11.57□□□□□ -0.56
SRPK1-212ENST00000512445 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
SRPK1-212ENST00000512445 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
SRPK1-212ENST00000512445 CUX1P39880 1505 aa11.55□□□□□ -0.56
SRPK1-212ENST00000512445 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
SRPK1-212ENST00000512445 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
SRPK1-212ENST00000512445 TARBP1Q13395 1621 aaKnown RBP11.48□□□□□ -0.57
SRPK1-212ENST00000512445 EIF4G3O43432 1585 aaKnown RBP11.47□□□□□ -0.57
SRPK1-212ENST00000512445 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
SRPK1-212ENST00000512445 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
SRPK1-212ENST00000512445 SNAPC4Q5SXM2 1469 aa11.42□□□□□ -0.58
SRPK1-212ENST00000512445 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
SRPK1-212ENST00000512445 GAPVD1Q14C86 1478 aa11.39□□□□□ -0.59
SRPK1-212ENST00000512445 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
SRPK1-212ENST00000512445 FOXD1Q16676 465 aa11.36□□□□□ -0.59
SRPK1-212ENST00000512445 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
SRPK1-212ENST00000512445 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
SRPK1-212ENST00000512445 CYB5RLQ6IPT4 315 aa11.35□□□□□ -0.59
SRPK1-212ENST00000512445 CHD1O14646 1710 aa11.34□□□□□ -0.59
SRPK1-212ENST00000512445 BIVM-ERCC5R4GMW8 1640 aa11.32□□□□□ -0.6
SRPK1-212ENST00000512445 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
SRPK1-212ENST00000512445 SYNJ2O15056 1496 aa11.31□□□□□ -0.6
SRPK1-212ENST00000512445 WDR97A6NE52 1622 aa11.3□□□□□ -0.6
SRPK1-212ENST00000512445 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
SRPK1-212ENST00000512445 RIMBP3CA6NJZ7 1639 aa11.28□□□□□ -0.6
SRPK1-212ENST00000512445 RIMBP3BA6NNM3 1639 aa11.28□□□□□ -0.6
SRPK1-212ENST00000512445 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
SRPK1-212ENST00000512445 RIMBP3Q9UFD9 1639 aa11.28□□□□□ -0.6
SRPK1-212ENST00000512445 PBRM1Q86U86 1689 aa11.28□□□□□ -0.6
SRPK1-212ENST00000512445 FHAD1B1AJZ9 1412 aa11.24□□□□□ -0.61
SRPK1-212ENST00000512445 GRIN2AQ12879 1464 aa11.23□□□□□ -0.61
SRPK1-212ENST00000512445 IGF1RP08069 1367 aa11.22□□□□□ -0.61
SRPK1-212ENST00000512445 KIF27Q86VH2 1401 aa11.22□□□□□ -0.61
SRPK1-212ENST00000512445 ADAMTS12P58397 1594 aa11.21□□□□□ -0.61
SRPK1-212ENST00000512445 PPP6R1Q9UPN7 881 aa11.21□□□□□ -0.61
SRPK1-212ENST00000512445 CLASP1Q7Z460 1538 aa11.2□□□□□ -0.62
SRPK1-212ENST00000512445 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
SRPK1-212ENST00000512445 ADRA2BP18089 450 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms