RNA–Protein interactions for RNA: ENST00000512432.1

CCDC149-207, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-207ENST00000512432 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
CCDC149-207ENST00000512432 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
CCDC149-207ENST00000512432 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
CCDC149-207ENST00000512432 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
CCDC149-207ENST00000512432 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
CCDC149-207ENST00000512432 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
CCDC149-207ENST00000512432 ABCC9O60706 1549 aa17.67■□□□□ 0.42
CCDC149-207ENST00000512432 RB1CC1Q8TDY2 1594 aa16.85■□□□□ 0.29
CCDC149-207ENST00000512432 NACADO15069 1562 aa16.73■□□□□ 0.27
CCDC149-207ENST00000512432 DCAF8L2P0C7V8 631 aa16.64■□□□□ 0.25
CCDC149-207ENST00000512432 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
CCDC149-207ENST00000512432 FOXD1Q16676 465 aa16.56■□□□□ 0.24
CCDC149-207ENST00000512432 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
CCDC149-207ENST00000512432 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
CCDC149-207ENST00000512432 MYO15BQ96JP2 1530 aa16.48■□□□□ 0.23
CCDC149-207ENST00000512432 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC149-207ENST00000512432 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
CCDC149-207ENST00000512432 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
CCDC149-207ENST00000512432 DCAF1Q9Y4B6 1507 aa16.29■□□□□ 0.2
CCDC149-207ENST00000512432 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
CCDC149-207ENST00000512432 SHROOM4Q9ULL8 1493 aa16.11■□□□□ 0.17
CCDC149-207ENST00000512432 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
CCDC149-207ENST00000512432 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
CCDC149-207ENST00000512432 ADRA2BP18089 450 aa15.91■□□□□ 0.14
CCDC149-207ENST00000512432 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
CCDC149-207ENST00000512432 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
CCDC149-207ENST00000512432 PIAS4Q8N2W9 510 aaPredicted RBP15.64■□□□□ 0.09
CCDC149-207ENST00000512432 SMARCA4P51532 1647 aa15.41■□□□□ 0.06
CCDC149-207ENST00000512432 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
CCDC149-207ENST00000512432 ATAD2BQ9ULI0 1458 aa15.38■□□□□ 0.05
CCDC149-207ENST00000512432 SMARCA2P51531 1590 aa15.37■□□□□ 0.05
CCDC149-207ENST00000512432 HMGXB3Q12766 1538 aa15.33■□□□□ 0.05
CCDC149-207ENST00000512432 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
CCDC149-207ENST00000512432 MSH5O43196 834 aa15.3■□□□□ 0.04
CCDC149-207ENST00000512432 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
CCDC149-207ENST00000512432 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
CCDC149-207ENST00000512432 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
CCDC149-207ENST00000512432 CUX2O14529 1486 aa15.21■□□□□ 0.03
CCDC149-207ENST00000512432 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
CCDC149-207ENST00000512432 NESP48681 1621 aa15.18■□□□□ 0.02
CCDC149-207ENST00000512432 DNAJC5Q9H3Z4 198 aa15.14■□□□□ 0.01
CCDC149-207ENST00000512432 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
CCDC149-207ENST00000512432 WIZO95785 1651 aa15.06■□□□□ 0
CCDC149-207ENST00000512432 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
CCDC149-207ENST00000512432 THOC2Q8NI27 1593 aaKnown RBP15.05■□□□□ -0
CCDC149-207ENST00000512432 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
CCDC149-207ENST00000512432 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
CCDC149-207ENST00000512432 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
CCDC149-207ENST00000512432 MRC2Q9UBG0 1479 aa14.87□□□□□ -0.03
CCDC149-207ENST00000512432 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
CCDC149-207ENST00000512432 WDR62O43379 1518 aa14.83□□□□□ -0.04
CCDC149-207ENST00000512432 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
CCDC149-207ENST00000512432 FANCD2Q9BXW9 1451 aa14.8□□□□□ -0.04
CCDC149-207ENST00000512432 CFTRP13569 1480 aa14.79□□□□□ -0.04
CCDC149-207ENST00000512432 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
CCDC149-207ENST00000512432 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
CCDC149-207ENST00000512432 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
CCDC149-207ENST00000512432 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
CCDC149-207ENST00000512432 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
CCDC149-207ENST00000512432 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
CCDC149-207ENST00000512432 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
CCDC149-207ENST00000512432 IFT140Q96RY7 1462 aa14.51□□□□□ -0.09
CCDC149-207ENST00000512432 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
CCDC149-207ENST00000512432 ABCC8Q09428 1581 aa14.5□□□□□ -0.09
CCDC149-207ENST00000512432 DNMBPQ6XZF7 1577 aa14.49□□□□□ -0.09
CCDC149-207ENST00000512432 ZNF608Q9ULD9 1512 aaPredicted RBP14.48□□□□□ -0.09
CCDC149-207ENST00000512432 EIF4G3O43432 1585 aaKnown RBP14.45□□□□□ -0.1
CCDC149-207ENST00000512432 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
CCDC149-207ENST00000512432 TARBP1Q13395 1621 aaKnown RBP14.41□□□□□ -0.1
CCDC149-207ENST00000512432 CHD1O14646 1710 aa14.38□□□□□ -0.11
CCDC149-207ENST00000512432 RIMBP3CA6NJZ7 1639 aa14.37□□□□□ -0.11
CCDC149-207ENST00000512432 RIMBP3BA6NNM3 1639 aa14.37□□□□□ -0.11
CCDC149-207ENST00000512432 RIMBP3Q9UFD9 1639 aa14.37□□□□□ -0.11
CCDC149-207ENST00000512432 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
CCDC149-207ENST00000512432 AQRO60306 1485 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCDC149-207ENST00000512432 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
CCDC149-207ENST00000512432 SOGA1O94964 1423 aa14.3□□□□□ -0.12
CCDC149-207ENST00000512432 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
CCDC149-207ENST00000512432 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
CCDC149-207ENST00000512432 CUX1P39880 1505 aa14.28□□□□□ -0.12
CCDC149-207ENST00000512432 WDR97A6NE52 1622 aa14.27□□□□□ -0.12
CCDC149-207ENST00000512432 FBLN2P98095 1184 aa14.27□□□□□ -0.13
CCDC149-207ENST00000512432 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.13
CCDC149-207ENST00000512432 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
CCDC149-207ENST00000512432 SUPT5HO00267 1087 aaKnown RBP14.26□□□□□ -0.13
CCDC149-207ENST00000512432 KCNA4P22459 653 aa14.26□□□□□ -0.13
CCDC149-207ENST00000512432 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
CCDC149-207ENST00000512432 DMRT2Q9Y5R5 561 aa14.23□□□□□ -0.13
CCDC149-207ENST00000512432 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
CCDC149-207ENST00000512432 PBRM1Q86U86 1689 aa14.21□□□□□ -0.13
CCDC149-207ENST00000512432 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
CCDC149-207ENST00000512432 MAGI1Q96QZ7 1491 aaPredicted RBP14.18□□□□□ -0.14
CCDC149-207ENST00000512432 CYB5RLQ6IPT4 315 aa14.17□□□□□ -0.14
CCDC149-207ENST00000512432 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
CCDC149-207ENST00000512432 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
CCDC149-207ENST00000512432 ARAP1Q96P48 1450 aa14.15□□□□□ -0.14
CCDC149-207ENST00000512432 GAPVD1Q14C86 1478 aa14.14□□□□□ -0.15
CCDC149-207ENST00000512432 CLASP1Q7Z460 1538 aa14.14□□□□□ -0.15
CCDC149-207ENST00000512432 SYNJ2O15056 1496 aa14.13□□□□□ -0.15
CCDC149-207ENST00000512432 ABCA5Q8WWZ7 1642 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms