RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.65
LDB2-214ENST00000512345 NISCHQ9Y2I1 1504 aa24.46■■□□□ 1.51
LDB2-214ENST00000512345 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
LDB2-214ENST00000512345 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.09
LDB2-214ENST00000512345 ABCC9O60706 1549 aa21.85■■□□□ 1.09
LDB2-214ENST00000512345 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
LDB2-214ENST00000512345 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
LDB2-214ENST00000512345 RB1CC1Q8TDY2 1594 aa20.82■□□□□ 0.92
LDB2-214ENST00000512345 NACADO15069 1562 aa20.71■□□□□ 0.91
LDB2-214ENST00000512345 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
LDB2-214ENST00000512345 MYO15BQ96JP2 1530 aa20.45■□□□□ 0.86
LDB2-214ENST00000512345 DNAJC5BQ9UF47 199 aa20.44■□□□□ 0.86
LDB2-214ENST00000512345 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
LDB2-214ENST00000512345 FOXD1Q16676 465 aa20.29■□□□□ 0.84
LDB2-214ENST00000512345 UNC13AQ9UPW8 1703 aa20.29■□□□□ 0.84
LDB2-214ENST00000512345 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
LDB2-214ENST00000512345 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
LDB2-214ENST00000512345 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
LDB2-214ENST00000512345 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
LDB2-214ENST00000512345 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
LDB2-214ENST00000512345 POTEDQ86YR6 584 aa19.92■□□□□ 0.78
LDB2-214ENST00000512345 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
LDB2-214ENST00000512345 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
LDB2-214ENST00000512345 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
LDB2-214ENST00000512345 MSH5O43196 834 aa19.21■□□□□ 0.67
LDB2-214ENST00000512345 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
LDB2-214ENST00000512345 NCAPD3P42695 1498 aa19.13■□□□□ 0.65
LDB2-214ENST00000512345 ATAD2BQ9ULI0 1458 aa19.08■□□□□ 0.64
LDB2-214ENST00000512345 SMARCA4P51532 1647 aa19.05■□□□□ 0.64
LDB2-214ENST00000512345 SMARCA2P51531 1590 aa19.02■□□□□ 0.63
LDB2-214ENST00000512345 HMGXB3Q12766 1538 aa18.98■□□□□ 0.63
LDB2-214ENST00000512345 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
LDB2-214ENST00000512345 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
LDB2-214ENST00000512345 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
LDB2-214ENST00000512345 ERCC6Q03468 1493 aa18.86■□□□□ 0.61
LDB2-214ENST00000512345 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
LDB2-214ENST00000512345 CUX2O14529 1486 aa18.81■□□□□ 0.6
LDB2-214ENST00000512345 PIAS4Q8N2W9 510 aaPredicted RBP18.79■□□□□ 0.6
LDB2-214ENST00000512345 NESP48681 1621 aa18.78■□□□□ 0.6
LDB2-214ENST00000512345 DNAJC5Q9H3Z4 198 aa18.72■□□□□ 0.59
LDB2-214ENST00000512345 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
LDB2-214ENST00000512345 WIZO95785 1651 aa18.6■□□□□ 0.57
LDB2-214ENST00000512345 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
LDB2-214ENST00000512345 THOC2Q8NI27 1593 aaKnown RBP18.56■□□□□ 0.56
LDB2-214ENST00000512345 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
LDB2-214ENST00000512345 KIF21AQ7Z4S6 1674 aa18.51■□□□□ 0.55
LDB2-214ENST00000512345 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
LDB2-214ENST00000512345 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
LDB2-214ENST00000512345 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
LDB2-214ENST00000512345 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
LDB2-214ENST00000512345 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.54
LDB2-214ENST00000512345 ADRA2BP18089 450 aa18.37■□□□□ 0.53
LDB2-214ENST00000512345 CFTRP13569 1480 aa18.35■□□□□ 0.53
LDB2-214ENST00000512345 WDR62O43379 1518 aa18.34■□□□□ 0.53
LDB2-214ENST00000512345 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
LDB2-214ENST00000512345 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
LDB2-214ENST00000512345 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
LDB2-214ENST00000512345 URB2Q14146 1524 aaKnown RBP18.17■□□□□ 0.5
LDB2-214ENST00000512345 PRDM2Q13029 1718 aa18.1■□□□□ 0.49
LDB2-214ENST00000512345 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
LDB2-214ENST00000512345 IFT140Q96RY7 1462 aa17.98■□□□□ 0.47
LDB2-214ENST00000512345 ABCC8Q09428 1581 aa17.97■□□□□ 0.47
LDB2-214ENST00000512345 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
LDB2-214ENST00000512345 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
LDB2-214ENST00000512345 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
LDB2-214ENST00000512345 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
LDB2-214ENST00000512345 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
LDB2-214ENST00000512345 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
LDB2-214ENST00000512345 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
LDB2-214ENST00000512345 AQRO60306 1485 aaKnown RBP eCLIP17.79■□□□□ 0.44
LDB2-214ENST00000512345 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
LDB2-214ENST00000512345 SOGA1O94964 1423 aa17.74■□□□□ 0.43
LDB2-214ENST00000512345 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
LDB2-214ENST00000512345 CUX1P39880 1505 aa17.7■□□□□ 0.42
LDB2-214ENST00000512345 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
LDB2-214ENST00000512345 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
LDB2-214ENST00000512345 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
LDB2-214ENST00000512345 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
LDB2-214ENST00000512345 FBLN2P98095 1184 aa17.67■□□□□ 0.42
LDB2-214ENST00000512345 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
LDB2-214ENST00000512345 CHD1O14646 1710 aa17.65■□□□□ 0.42
LDB2-214ENST00000512345 WDR97A6NE52 1622 aa17.64■□□□□ 0.41
LDB2-214ENST00000512345 KCNA4P22459 653 aa17.63■□□□□ 0.41
LDB2-214ENST00000512345 SNAPC4Q5SXM2 1469 aa17.61■□□□□ 0.41
LDB2-214ENST00000512345 GRIN2BQ13224 1484 aa17.58■□□□□ 0.41
LDB2-214ENST00000512345 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
LDB2-214ENST00000512345 CYB5RLQ6IPT4 315 aa17.55■□□□□ 0.4
LDB2-214ENST00000512345 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
LDB2-214ENST00000512345 ABCA10Q8WWZ4 1543 aa17.52■□□□□ 0.4
LDB2-214ENST00000512345 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.4
LDB2-214ENST00000512345 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
LDB2-214ENST00000512345 ARAP1Q96P48 1450 aa17.5■□□□□ 0.39
LDB2-214ENST00000512345 CLASP1Q7Z460 1538 aa17.49■□□□□ 0.39
LDB2-214ENST00000512345 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
LDB2-214ENST00000512345 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
LDB2-214ENST00000512345 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
LDB2-214ENST00000512345 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
LDB2-214ENST00000512345 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
LDB2-214ENST00000512345 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
LDB2-214ENST00000512345 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms