RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
DEPDC1B-205ENST00000512078 ABCC9O60706 1549 aa19.32■□□□□ 0.68
DEPDC1B-205ENST00000512078 CCDC180Q9P1Z9 1646 aa18.76■□□□□ 0.59
DEPDC1B-205ENST00000512078 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
DEPDC1B-205ENST00000512078 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
DEPDC1B-205ENST00000512078 NACADO15069 1562 aa17.86■□□□□ 0.45
DEPDC1B-205ENST00000512078 UNC13AQ9UPW8 1703 aa17.82■□□□□ 0.44
DEPDC1B-205ENST00000512078 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
DEPDC1B-205ENST00000512078 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
DEPDC1B-205ENST00000512078 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
DEPDC1B-205ENST00000512078 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
DEPDC1B-205ENST00000512078 CC2D2AQ9P2K1 1620 aa17.49■□□□□ 0.39
DEPDC1B-205ENST00000512078 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
DEPDC1B-205ENST00000512078 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.38
DEPDC1B-205ENST00000512078 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
DEPDC1B-205ENST00000512078 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.36
DEPDC1B-205ENST00000512078 CUX2O14529 1486 aa17.01■□□□□ 0.31
DEPDC1B-205ENST00000512078 SCRIBQ14160 1630 aa16.96■□□□□ 0.31
DEPDC1B-205ENST00000512078 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
DEPDC1B-205ENST00000512078 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
DEPDC1B-205ENST00000512078 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
DEPDC1B-205ENST00000512078 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
DEPDC1B-205ENST00000512078 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
DEPDC1B-205ENST00000512078 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
DEPDC1B-205ENST00000512078 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
DEPDC1B-205ENST00000512078 NESP48681 1621 aa16.41■□□□□ 0.22
DEPDC1B-205ENST00000512078 HMGXB3Q12766 1538 aa16.32■□□□□ 0.2
DEPDC1B-205ENST00000512078 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
DEPDC1B-205ENST00000512078 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
DEPDC1B-205ENST00000512078 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
DEPDC1B-205ENST00000512078 LAMC3Q9Y6N6 1575 aa16.24■□□□□ 0.19
DEPDC1B-205ENST00000512078 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
DEPDC1B-205ENST00000512078 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
DEPDC1B-205ENST00000512078 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
DEPDC1B-205ENST00000512078 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
DEPDC1B-205ENST00000512078 WDR62O43379 1518 aa16.06■□□□□ 0.16
DEPDC1B-205ENST00000512078 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
DEPDC1B-205ENST00000512078 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
DEPDC1B-205ENST00000512078 PEG3Q9GZU2 1588 aa16.02■□□□□ 0.15
DEPDC1B-205ENST00000512078 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
DEPDC1B-205ENST00000512078 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
DEPDC1B-205ENST00000512078 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
DEPDC1B-205ENST00000512078 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
DEPDC1B-205ENST00000512078 ARHGEF11O15085 1522 aa15.84■□□□□ 0.13
DEPDC1B-205ENST00000512078 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
DEPDC1B-205ENST00000512078 MROH2BQ7Z745 1585 aa15.73■□□□□ 0.11
DEPDC1B-205ENST00000512078 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
DEPDC1B-205ENST00000512078 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
DEPDC1B-205ENST00000512078 CYB5RLQ6IPT4 315 aa15.67■□□□□ 0.1
DEPDC1B-205ENST00000512078 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
DEPDC1B-205ENST00000512078 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
DEPDC1B-205ENST00000512078 CFTRP13569 1480 aa15.59■□□□□ 0.09
DEPDC1B-205ENST00000512078 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
DEPDC1B-205ENST00000512078 CHD1O14646 1710 aa15.55■□□□□ 0.08
DEPDC1B-205ENST00000512078 WIZO95785 1651 aa15.54■□□□□ 0.08
DEPDC1B-205ENST00000512078 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
DEPDC1B-205ENST00000512078 PRDM2Q13029 1718 aa15.52■□□□□ 0.07
DEPDC1B-205ENST00000512078 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
DEPDC1B-205ENST00000512078 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
DEPDC1B-205ENST00000512078 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
DEPDC1B-205ENST00000512078 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
DEPDC1B-205ENST00000512078 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.04
DEPDC1B-205ENST00000512078 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.04
DEPDC1B-205ENST00000512078 AQRO60306 1485 aaKnown RBP eCLIP15.3■□□□□ 0.042e-7■■■■■ 29
DEPDC1B-205ENST00000512078 TOP2AP11388 1531 aaKnown RBP15.3■□□□□ 0.04
DEPDC1B-205ENST00000512078 ABCC8Q09428 1581 aa15.3■□□□□ 0.04
DEPDC1B-205ENST00000512078 FBLN2P98095 1184 aa15.28■□□□□ 0.04
DEPDC1B-205ENST00000512078 DNMBPQ6XZF7 1577 aa15.28■□□□□ 0.04
DEPDC1B-205ENST00000512078 ILDR1Q86SU0 546 aaPredicted RBP15.26■□□□□ 0.03
DEPDC1B-205ENST00000512078 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
DEPDC1B-205ENST00000512078 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
DEPDC1B-205ENST00000512078 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
DEPDC1B-205ENST00000512078 POLA1P09884 1462 aaPredicted RBP15.16■□□□□ 0.02
DEPDC1B-205ENST00000512078 WDR97A6NE52 1622 aa15.16■□□□□ 0.02
DEPDC1B-205ENST00000512078 KIF13AQ9H1H9 1805 aa15.13■□□□□ 0.01
DEPDC1B-205ENST00000512078 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
DEPDC1B-205ENST00000512078 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
DEPDC1B-205ENST00000512078 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
DEPDC1B-205ENST00000512078 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0
DEPDC1B-205ENST00000512078 TDRD9Q8NDG6 1382 aaKnown RBP15.07■□□□□ 0
DEPDC1B-205ENST00000512078 SYNJ2O15056 1496 aa15.07■□□□□ 0
DEPDC1B-205ENST00000512078 SOGA1O94964 1423 aa15.03■□□□□ -0
DEPDC1B-205ENST00000512078 GRIN2BQ13224 1484 aa15.02■□□□□ -0
DEPDC1B-205ENST00000512078 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
DEPDC1B-205ENST00000512078 PBRM1Q86U86 1689 aa15□□□□□ -0.01
DEPDC1B-205ENST00000512078 KDM4FA0A1W2PPD8 638 aa14.98□□□□□ -0.01
DEPDC1B-205ENST00000512078 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
DEPDC1B-205ENST00000512078 CEP170Q5SW79 1584 aa14.92□□□□□ -0.02
DEPDC1B-205ENST00000512078 KDM6BO15054 1643 aa14.89□□□□□ -0.03
DEPDC1B-205ENST00000512078 SHROOM2Q13796 1616 aa14.89□□□□□ -0.03
DEPDC1B-205ENST00000512078 ABCC10Q5T3U5 1492 aa14.86□□□□□ -0.03
DEPDC1B-205ENST00000512078 DIP2BQ9P265 1576 aa14.85□□□□□ -0.03
DEPDC1B-205ENST00000512078 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
DEPDC1B-205ENST00000512078 CUX1P39880 1505 aa14.84□□□□□ -0.03
DEPDC1B-205ENST00000512078 GRIN2AQ12879 1464 aa14.83□□□□□ -0.03
DEPDC1B-205ENST00000512078 NUP160Q12769 1436 aa14.83□□□□□ -0.04
DEPDC1B-205ENST00000512078 MAPKBP1O60336 1514 aa14.82□□□□□ -0.04
DEPDC1B-205ENST00000512078 FAM69CQ0P6D2 419 aa14.81□□□□□ -0.04
DEPDC1B-205ENST00000512078 HECW2Q9P2P5 1572 aa14.8□□□□□ -0.04
DEPDC1B-205ENST00000512078 TSPOAP1O95153 1857 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms