RNA–Protein interactions for RNA: ENST00000511996.5

AFF1-209, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-209ENST00000511996 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.29
AFF1-209ENST00000511996 ABCC9O60706 1549 aa32.92■■■□□ 2.86
AFF1-209ENST00000511996 CCDC180Q9P1Z9 1646 aa32.31■■■□□ 2.76
AFF1-209ENST00000511996 DNAJC5BQ9UF47 199 aa31.4■■■□□ 2.62
AFF1-209ENST00000511996 RB1CC1Q8TDY2 1594 aa31.08■■■□□ 2.57
AFF1-209ENST00000511996 NACADO15069 1562 aa30.66■■■□□ 2.5
AFF1-209ENST00000511996 PABPN1Q86U42 306 aaKnown RBP eCLIP30.51■■■□□ 2.47
AFF1-209ENST00000511996 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
AFF1-209ENST00000511996 DCAF8L2P0C7V8 631 aa30.42■■■□□ 2.46
AFF1-209ENST00000511996 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
AFF1-209ENST00000511996 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
AFF1-209ENST00000511996 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
AFF1-209ENST00000511996 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
AFF1-209ENST00000511996 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
AFF1-209ENST00000511996 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
AFF1-209ENST00000511996 DNAJC5Q9H3Z4 198 aa29.4■■■□□ 2.3
AFF1-209ENST00000511996 SCRIBQ14160 1630 aa29.37■■■□□ 2.29
AFF1-209ENST00000511996 DCAF1Q9Y4B6 1507 aa29.33■■■□□ 2.29
AFF1-209ENST00000511996 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
AFF1-209ENST00000511996 CUX2O14529 1486 aa28.66■■■□□ 2.18
AFF1-209ENST00000511996 ERCC6Q03468 1493 aa28.52■■■□□ 2.16
AFF1-209ENST00000511996 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
AFF1-209ENST00000511996 ATAD2BQ9ULI0 1458 aa28.08■■■□□ 2.09
AFF1-209ENST00000511996 NESP48681 1621 aa28.06■■■□□ 2.08
AFF1-209ENST00000511996 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
AFF1-209ENST00000511996 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
AFF1-209ENST00000511996 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
AFF1-209ENST00000511996 SMARCA4P51532 1647 aa27.94■■■□□ 2.06
AFF1-209ENST00000511996 TRIM41Q8WV44 630 aa27.89■■■□□ 2.06
AFF1-209ENST00000511996 BAZ1BQ9UIG0 1483 aaKnown RBP27.83■■■□□ 2.04
AFF1-209ENST00000511996 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
AFF1-209ENST00000511996 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
AFF1-209ENST00000511996 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.03
AFF1-209ENST00000511996 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
AFF1-209ENST00000511996 PEG3Q9GZU2 1588 aa27.63■■■□□ 2.01
AFF1-209ENST00000511996 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
AFF1-209ENST00000511996 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.98
AFF1-209ENST00000511996 WDR62O43379 1518 aa27.39■■□□□ 1.98
AFF1-209ENST00000511996 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
AFF1-209ENST00000511996 OSCARQ8IYS5 282 aa27.25■■□□□ 1.95
AFF1-209ENST00000511996 CEP164Q9UPV0 1460 aa27.21■■□□□ 1.95
AFF1-209ENST00000511996 WIZO95785 1651 aa27.11■■□□□ 1.93
AFF1-209ENST00000511996 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
AFF1-209ENST00000511996 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
AFF1-209ENST00000511996 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
AFF1-209ENST00000511996 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
AFF1-209ENST00000511996 CFTRP13569 1480 aa26.92■■□□□ 1.9
AFF1-209ENST00000511996 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.89
AFF1-209ENST00000511996 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
AFF1-209ENST00000511996 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
AFF1-209ENST00000511996 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
AFF1-209ENST00000511996 TOP2AP11388 1531 aaKnown RBP26.67■■□□□ 1.86
AFF1-209ENST00000511996 ZNF608Q9ULD9 1512 aaPredicted RBP26.67■■□□□ 1.86
AFF1-209ENST00000511996 CYB5RLQ6IPT4 315 aa26.67■■□□□ 1.86
AFF1-209ENST00000511996 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
AFF1-209ENST00000511996 CHD1O14646 1710 aa26.56■■□□□ 1.84
AFF1-209ENST00000511996 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
AFF1-209ENST00000511996 RSF1Q96T23 1441 aaPredicted RBP26.55■■□□□ 1.84
AFF1-209ENST00000511996 TOPBP1Q92547 1522 aa26.51■■□□□ 1.83
AFF1-209ENST00000511996 ARAP1Q96P48 1450 aa26.46■■□□□ 1.83
AFF1-209ENST00000511996 ABCC8Q09428 1581 aa26.45■■□□□ 1.82
AFF1-209ENST00000511996 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
AFF1-209ENST00000511996 FBLN2P98095 1184 aa26.4■■□□□ 1.82
AFF1-209ENST00000511996 DNMBPQ6XZF7 1577 aa26.37■■□□□ 1.81
AFF1-209ENST00000511996 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
AFF1-209ENST00000511996 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
AFF1-209ENST00000511996 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
AFF1-209ENST00000511996 POLA1P09884 1462 aaPredicted RBP26.18■■□□□ 1.78
AFF1-209ENST00000511996 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
AFF1-209ENST00000511996 CLASP1Q7Z460 1538 aa26.12■■□□□ 1.77
AFF1-209ENST00000511996 RAD54L2Q9Y4B4 1467 aa26.1■■□□□ 1.77
AFF1-209ENST00000511996 SNAPC4Q5SXM2 1469 aa26.09■■□□□ 1.77
AFF1-209ENST00000511996 TDRD9Q8NDG6 1382 aaKnown RBP26.08■■□□□ 1.77
AFF1-209ENST00000511996 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
AFF1-209ENST00000511996 SOGA1O94964 1423 aa26.07■■□□□ 1.76
AFF1-209ENST00000511996 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
AFF1-209ENST00000511996 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
AFF1-209ENST00000511996 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
AFF1-209ENST00000511996 GRIN2BQ13224 1484 aa25.92■■□□□ 1.74
AFF1-209ENST00000511996 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
AFF1-209ENST00000511996 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
AFF1-209ENST00000511996 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
AFF1-209ENST00000511996 CUX1P39880 1505 aa25.78■■□□□ 1.72
AFF1-209ENST00000511996 ERCC6L2Q5T890 1561 aa25.66■■□□□ 1.7
AFF1-209ENST00000511996 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.7
AFF1-209ENST00000511996 KIF13AQ9H1H9 1805 aa25.63■■□□□ 1.69
AFF1-209ENST00000511996 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
AFF1-209ENST00000511996 GRIN2AQ12879 1464 aa25.59■■□□□ 1.69
AFF1-209ENST00000511996 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
AFF1-209ENST00000511996 SHROOM2Q13796 1616 aa25.51■■□□□ 1.67
AFF1-209ENST00000511996 ADAMTS12P58397 1594 aa25.49■■□□□ 1.67
AFF1-209ENST00000511996 NUP160Q12769 1436 aa25.48■■□□□ 1.67
AFF1-209ENST00000511996 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
AFF1-209ENST00000511996 FAM69CQ0P6D2 419 aa25.36■■□□□ 1.65
AFF1-209ENST00000511996 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
AFF1-209ENST00000511996 NPM1P06748 294 aaKnown RBP eCLIP25.34■■□□□ 1.65
AFF1-209ENST00000511996 PRG4Q92954 1404 aaPredicted RBP25.34■■□□□ 1.65
AFF1-209ENST00000511996 ABCC10Q5T3U5 1492 aa25.31■■□□□ 1.64
AFF1-209ENST00000511996 KDM6BO15054 1643 aa25.29■■□□□ 1.64
AFF1-209ENST00000511996 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms