RNA–Protein interactions for RNA: ENST00000511986.1

HMGCR-210, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 5

Gene HMGCR, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-210ENST00000511986 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
HMGCR-210ENST00000511986 ABCC9O60706 1549 aa19.51■□□□□ 0.71
HMGCR-210ENST00000511986 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
HMGCR-210ENST00000511986 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
HMGCR-210ENST00000511986 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
HMGCR-210ENST00000511986 NACADO15069 1562 aa18.21■□□□□ 0.51
HMGCR-210ENST00000511986 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
HMGCR-210ENST00000511986 DCAF8L2P0C7V8 631 aa18.1■□□□□ 0.49
HMGCR-210ENST00000511986 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
HMGCR-210ENST00000511986 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
HMGCR-210ENST00000511986 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
HMGCR-210ENST00000511986 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
HMGCR-210ENST00000511986 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
HMGCR-210ENST00000511986 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
HMGCR-210ENST00000511986 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
HMGCR-210ENST00000511986 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
HMGCR-210ENST00000511986 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
HMGCR-210ENST00000511986 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
HMGCR-210ENST00000511986 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
HMGCR-210ENST00000511986 CUX2O14529 1486 aa16.85■□□□□ 0.29
HMGCR-210ENST00000511986 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
HMGCR-210ENST00000511986 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
HMGCR-210ENST00000511986 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
HMGCR-210ENST00000511986 NESP48681 1621 aa16.72■□□□□ 0.27
HMGCR-210ENST00000511986 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
HMGCR-210ENST00000511986 HMGXB3Q12766 1538 aa16.67■□□□□ 0.26
HMGCR-210ENST00000511986 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
HMGCR-210ENST00000511986 THOC2Q8NI27 1593 aaKnown RBP16.58■□□□□ 0.24
HMGCR-210ENST00000511986 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
HMGCR-210ENST00000511986 BAZ1AQ9NRL2 1556 aaPredicted RBP16.54■□□□□ 0.24
HMGCR-210ENST00000511986 KIF21AQ7Z4S6 1674 aa16.5■□□□□ 0.23
HMGCR-210ENST00000511986 PEG3Q9GZU2 1588 aa16.49■□□□□ 0.23
HMGCR-210ENST00000511986 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
HMGCR-210ENST00000511986 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
HMGCR-210ENST00000511986 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
HMGCR-210ENST00000511986 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
HMGCR-210ENST00000511986 TRIM41Q8WV44 630 aa16.33■□□□□ 0.2
HMGCR-210ENST00000511986 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
HMGCR-210ENST00000511986 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
HMGCR-210ENST00000511986 WIZO95785 1651 aa16.27■□□□□ 0.19
HMGCR-210ENST00000511986 WDR62O43379 1518 aa16.25■□□□□ 0.19
HMGCR-210ENST00000511986 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
HMGCR-210ENST00000511986 FANCD2Q9BXW9 1451 aa16.13■□□□□ 0.17
HMGCR-210ENST00000511986 CFTRP13569 1480 aa16.06■□□□□ 0.16
HMGCR-210ENST00000511986 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
HMGCR-210ENST00000511986 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
HMGCR-210ENST00000511986 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
HMGCR-210ENST00000511986 TOP2AP11388 1531 aaKnown RBP15.99■□□□□ 0.15
HMGCR-210ENST00000511986 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
HMGCR-210ENST00000511986 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
HMGCR-210ENST00000511986 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
HMGCR-210ENST00000511986 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
HMGCR-210ENST00000511986 ZNF608Q9ULD9 1512 aaPredicted RBP15.9■□□□□ 0.14
HMGCR-210ENST00000511986 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
HMGCR-210ENST00000511986 IFT140Q96RY7 1462 aa15.83■□□□□ 0.12
HMGCR-210ENST00000511986 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
HMGCR-210ENST00000511986 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
HMGCR-210ENST00000511986 TOPBP1Q92547 1522 aa15.81■□□□□ 0.12
HMGCR-210ENST00000511986 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
HMGCR-210ENST00000511986 CHD1O14646 1710 aa15.75■□□□□ 0.11
HMGCR-210ENST00000511986 DNMBPQ6XZF7 1577 aa15.72■□□□□ 0.11
HMGCR-210ENST00000511986 CYB5RLQ6IPT4 315 aa15.71■□□□□ 0.11
HMGCR-210ENST00000511986 TARBP1Q13395 1621 aaKnown RBP15.71■□□□□ 0.11
HMGCR-210ENST00000511986 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.12e-18■■■■■ 63.4
HMGCR-210ENST00000511986 ABCC8Q09428 1581 aa15.68■□□□□ 0.1
HMGCR-210ENST00000511986 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
HMGCR-210ENST00000511986 FBLN2P98095 1184 aa15.64■□□□□ 0.09
HMGCR-210ENST00000511986 POLA1P09884 1462 aaPredicted RBP15.63■□□□□ 0.09
HMGCR-210ENST00000511986 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
HMGCR-210ENST00000511986 RAD54L2Q9Y4B4 1467 aa15.6■□□□□ 0.09
HMGCR-210ENST00000511986 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
HMGCR-210ENST00000511986 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
HMGCR-210ENST00000511986 SOGA1O94964 1423 aa15.53■□□□□ 0.08
HMGCR-210ENST00000511986 CLASP1Q7Z460 1538 aa15.53■□□□□ 0.08
HMGCR-210ENST00000511986 FGD5Q6ZNL6 1462 aa15.51■□□□□ 0.07
HMGCR-210ENST00000511986 CUX1P39880 1505 aa15.47■□□□□ 0.07
HMGCR-210ENST00000511986 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
HMGCR-210ENST00000511986 WDR97A6NE52 1622 aa15.45■□□□□ 0.06
HMGCR-210ENST00000511986 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
HMGCR-210ENST00000511986 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
HMGCR-210ENST00000511986 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
HMGCR-210ENST00000511986 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
HMGCR-210ENST00000511986 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
HMGCR-210ENST00000511986 GAPVD1Q14C86 1478 aa15.35■□□□□ 0.05
HMGCR-210ENST00000511986 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
HMGCR-210ENST00000511986 ERCC6L2Q5T890 1561 aa15.32■□□□□ 0.04
HMGCR-210ENST00000511986 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
HMGCR-210ENST00000511986 GRIN2AQ12879 1464 aa15.24■□□□□ 0.03
HMGCR-210ENST00000511986 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
HMGCR-210ENST00000511986 ADAMTS12P58397 1594 aa15.23■□□□□ 0.03
HMGCR-210ENST00000511986 NUP160Q12769 1436 aa15.18■□□□□ 0.02
HMGCR-210ENST00000511986 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
HMGCR-210ENST00000511986 WRNQ14191 1432 aaPredicted RBP eCLIP15.16■□□□□ 0.02
HMGCR-210ENST00000511986 KIF13AQ9H1H9 1805 aa15.15■□□□□ 0.02
HMGCR-210ENST00000511986 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
HMGCR-210ENST00000511986 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
HMGCR-210ENST00000511986 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
HMGCR-210ENST00000511986 SUPT5HO00267 1087 aaKnown RBP15.11■□□□□ 0.01
HMGCR-210ENST00000511986 ERICH3Q5RHP9 1530 aa15.08■□□□□ 0.01
HMGCR-210ENST00000511986 PRG4Q92954 1404 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms