RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
COPS4-211ENST00000511891 NISCHQ9Y2I1 1504 aa24.48■■□□□ 1.51
COPS4-211ENST00000511891 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
COPS4-211ENST00000511891 SENP3Q9H4L4 574 aaPredicted RBP21.93■■□□□ 1.1
COPS4-211ENST00000511891 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.08
COPS4-211ENST00000511891 ABCC9O60706 1549 aa21.74■■□□□ 1.07
COPS4-211ENST00000511891 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
COPS4-211ENST00000511891 RB1CC1Q8TDY2 1594 aa20.71■□□□□ 0.91
COPS4-211ENST00000511891 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
COPS4-211ENST00000511891 NACADO15069 1562 aa20.6■□□□□ 0.89
COPS4-211ENST00000511891 FOXD1Q16676 465 aa20.55■□□□□ 0.88
COPS4-211ENST00000511891 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
COPS4-211ENST00000511891 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
COPS4-211ENST00000511891 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
COPS4-211ENST00000511891 UNC13AQ9UPW8 1703 aa20.24■□□□□ 0.83
COPS4-211ENST00000511891 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
COPS4-211ENST00000511891 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
COPS4-211ENST00000511891 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
COPS4-211ENST00000511891 POTEDQ86YR6 584 aa20.04■□□□□ 0.8
COPS4-211ENST00000511891 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
COPS4-211ENST00000511891 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
COPS4-211ENST00000511891 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
COPS4-211ENST00000511891 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
COPS4-211ENST00000511891 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
COPS4-211ENST00000511891 MSH5O43196 834 aa19.43■□□□□ 0.7
COPS4-211ENST00000511891 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
COPS4-211ENST00000511891 SMARCA4P51532 1647 aa19.05■□□□□ 0.64
COPS4-211ENST00000511891 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
COPS4-211ENST00000511891 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
COPS4-211ENST00000511891 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
COPS4-211ENST00000511891 SMARCA2P51531 1590 aa18.95■□□□□ 0.62
COPS4-211ENST00000511891 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
COPS4-211ENST00000511891 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
COPS4-211ENST00000511891 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
COPS4-211ENST00000511891 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.6
COPS4-211ENST00000511891 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
COPS4-211ENST00000511891 NESP48681 1621 aa18.74■□□□□ 0.59
COPS4-211ENST00000511891 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
COPS4-211ENST00000511891 ADRA2BP18089 450 aa18.69■□□□□ 0.58
COPS4-211ENST00000511891 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
COPS4-211ENST00000511891 WIZO95785 1651 aa18.67■□□□□ 0.58
COPS4-211ENST00000511891 CUX2O14529 1486 aa18.58■□□□□ 0.57
COPS4-211ENST00000511891 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
COPS4-211ENST00000511891 LAMC3Q9Y6N6 1575 aa18.56■□□□□ 0.56
COPS4-211ENST00000511891 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
COPS4-211ENST00000511891 PDS5BQ9NTI5 1447 aa18.47■□□□□ 0.55
COPS4-211ENST00000511891 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
COPS4-211ENST00000511891 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
COPS4-211ENST00000511891 TOP2AP11388 1531 aaKnown RBP18.43■□□□□ 0.54
COPS4-211ENST00000511891 DNAJC5Q9H3Z4 198 aa18.38■□□□□ 0.53
COPS4-211ENST00000511891 CFTRP13569 1480 aa18.31■□□□□ 0.52
COPS4-211ENST00000511891 MRC2Q9UBG0 1479 aa18.31■□□□□ 0.52
COPS4-211ENST00000511891 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
COPS4-211ENST00000511891 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
COPS4-211ENST00000511891 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
COPS4-211ENST00000511891 WDR62O43379 1518 aa18.24■□□□□ 0.51
COPS4-211ENST00000511891 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
COPS4-211ENST00000511891 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
COPS4-211ENST00000511891 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
COPS4-211ENST00000511891 TOPBP1Q92547 1522 aa17.96■□□□□ 0.47
COPS4-211ENST00000511891 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
COPS4-211ENST00000511891 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
COPS4-211ENST00000511891 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.45
COPS4-211ENST00000511891 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
COPS4-211ENST00000511891 OSCARQ8IYS5 282 aa17.81■□□□□ 0.44
COPS4-211ENST00000511891 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
COPS4-211ENST00000511891 TARBP1Q13395 1621 aaKnown RBP17.77■□□□□ 0.44
COPS4-211ENST00000511891 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.43
COPS4-211ENST00000511891 RAD54L2Q9Y4B4 1467 aa17.76■□□□□ 0.43
COPS4-211ENST00000511891 EIF4G3O43432 1585 aaKnown RBP17.76■□□□□ 0.43
COPS4-211ENST00000511891 CUX1P39880 1505 aa17.74■□□□□ 0.43
COPS4-211ENST00000511891 SOGA1O94964 1423 aa17.72■□□□□ 0.43
COPS4-211ENST00000511891 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
COPS4-211ENST00000511891 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
COPS4-211ENST00000511891 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
COPS4-211ENST00000511891 FBLN2P98095 1184 aa17.62■□□□□ 0.41
COPS4-211ENST00000511891 CHD1O14646 1710 aa17.59■□□□□ 0.41
COPS4-211ENST00000511891 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
COPS4-211ENST00000511891 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
COPS4-211ENST00000511891 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
COPS4-211ENST00000511891 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
COPS4-211ENST00000511891 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
COPS4-211ENST00000511891 GRIN2BQ13224 1484 aa17.52■□□□□ 0.4
COPS4-211ENST00000511891 ARHGEF11O15085 1522 aa17.52■□□□□ 0.39
COPS4-211ENST00000511891 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
COPS4-211ENST00000511891 ABCA10Q8WWZ4 1543 aa17.51■□□□□ 0.39
COPS4-211ENST00000511891 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
COPS4-211ENST00000511891 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
COPS4-211ENST00000511891 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
COPS4-211ENST00000511891 MAGI1Q96QZ7 1491 aaPredicted RBP17.49■□□□□ 0.39
COPS4-211ENST00000511891 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
COPS4-211ENST00000511891 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
COPS4-211ENST00000511891 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
COPS4-211ENST00000511891 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
COPS4-211ENST00000511891 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
COPS4-211ENST00000511891 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
COPS4-211ENST00000511891 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
COPS4-211ENST00000511891 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
COPS4-211ENST00000511891 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
COPS4-211ENST00000511891 ADAMTS12P58397 1594 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms