RNA–Protein interactions for RNA: ENST00000511538.5

GATB-208, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 2

Gene GATB, Length 1,345 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-208ENST00000511538 NISCHQ9Y2I1 1504 aa38.03■■■■□ 3.68
GATB-208ENST00000511538 CCDC180Q9P1Z9 1646 aa33.76■■■□□ 2.99
GATB-208ENST00000511538 ABCC9O60706 1549 aa33.07■■■□□ 2.88
GATB-208ENST00000511538 NACADO15069 1562 aa31.77■■■□□ 2.68
GATB-208ENST00000511538 RB1CC1Q8TDY2 1594 aa31.77■■■□□ 2.68
GATB-208ENST00000511538 DCAF8L2P0C7V8 631 aa31.69■■■□□ 2.66
GATB-208ENST00000511538 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
GATB-208ENST00000511538 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
GATB-208ENST00000511538 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
GATB-208ENST00000511538 UNC13AQ9UPW8 1703 aa31.15■■■□□ 2.58
GATB-208ENST00000511538 BICRAQ9NZM4 1560 aa30.94■■■□□ 2.54
GATB-208ENST00000511538 PABPN1Q86U42 306 aaKnown RBP eCLIP30.94■■■□□ 2.54
GATB-208ENST00000511538 SCRIBQ14160 1630 aa30.77■■■□□ 2.52
GATB-208ENST00000511538 DNAJC5BQ9UF47 199 aa30.56■■■□□ 2.48
GATB-208ENST00000511538 SHROOM4Q9ULL8 1493 aa30.49■■■□□ 2.47
GATB-208ENST00000511538 EIF4G1Q04637 1599 aaKnown RBP30.04■■■□□ 2.4
GATB-208ENST00000511538 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
GATB-208ENST00000511538 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
GATB-208ENST00000511538 SMARCA4P51532 1647 aa29.48■■■□□ 2.31
GATB-208ENST00000511538 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
GATB-208ENST00000511538 NCAPD3P42695 1498 aa29.38■■■□□ 2.29
GATB-208ENST00000511538 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
GATB-208ENST00000511538 MROH2BQ7Z745 1585 aa29.32■■■□□ 2.28
GATB-208ENST00000511538 SMARCA2P51531 1590 aa29.25■■■□□ 2.27
GATB-208ENST00000511538 PEG3Q9GZU2 1588 aa29.24■■■□□ 2.27
GATB-208ENST00000511538 HMGXB3Q12766 1538 aa29.16■■■□□ 2.26
GATB-208ENST00000511538 BAZ1BQ9UIG0 1483 aaKnown RBP29.03■■■□□ 2.24
GATB-208ENST00000511538 RSF1Q96T23 1441 aaPredicted RBP28.99■■■□□ 2.23
GATB-208ENST00000511538 WIZO95785 1651 aa28.98■■■□□ 2.23
GATB-208ENST00000511538 NESP48681 1621 aa28.66■■■□□ 2.18
GATB-208ENST00000511538 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
GATB-208ENST00000511538 LAMC3Q9Y6N6 1575 aa28.53■■■□□ 2.16
GATB-208ENST00000511538 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
GATB-208ENST00000511538 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
GATB-208ENST00000511538 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
GATB-208ENST00000511538 CFTRP13569 1480 aa28.32■■■□□ 2.12
GATB-208ENST00000511538 PDS5BQ9NTI5 1447 aa28.32■■■□□ 2.12
GATB-208ENST00000511538 KIF21AQ7Z4S6 1674 aa28.27■■■□□ 2.12
GATB-208ENST00000511538 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
GATB-208ENST00000511538 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
GATB-208ENST00000511538 CUX2O14529 1486 aa28.19■■■□□ 2.1
GATB-208ENST00000511538 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.09
GATB-208ENST00000511538 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
GATB-208ENST00000511538 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
GATB-208ENST00000511538 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
GATB-208ENST00000511538 MRC2Q9UBG0 1479 aa28.03■■■□□ 2.08
GATB-208ENST00000511538 WDR62O43379 1518 aa27.97■■■□□ 2.07
GATB-208ENST00000511538 URB2Q14146 1524 aaKnown RBP27.88■■■□□ 2.05
GATB-208ENST00000511538 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
GATB-208ENST00000511538 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
GATB-208ENST00000511538 DNMBPQ6XZF7 1577 aa27.61■■■□□ 2.01
GATB-208ENST00000511538 CUX1P39880 1505 aa27.49■■□□□ 1.99
GATB-208ENST00000511538 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
GATB-208ENST00000511538 DNAJC5Q9H3Z4 198 aa27.47■■□□□ 1.99
GATB-208ENST00000511538 POLA1P09884 1462 aaPredicted RBP27.45■■□□□ 1.98
GATB-208ENST00000511538 ZNF608Q9ULD9 1512 aaPredicted RBP27.43■■□□□ 1.98
GATB-208ENST00000511538 TARBP1Q13395 1621 aaKnown RBP27.42■■□□□ 1.98
GATB-208ENST00000511538 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
GATB-208ENST00000511538 RAD54L2Q9Y4B4 1467 aa27.35■■□□□ 1.97
GATB-208ENST00000511538 SOGA1O94964 1423 aa27.34■■□□□ 1.97
GATB-208ENST00000511538 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.95
GATB-208ENST00000511538 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
GATB-208ENST00000511538 EIF4G3O43432 1585 aaKnown RBP27.23■■□□□ 1.95
GATB-208ENST00000511538 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
GATB-208ENST00000511538 BIVM-ERCC5R4GMW8 1640 aa27.22■■□□□ 1.95
GATB-208ENST00000511538 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
GATB-208ENST00000511538 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
GATB-208ENST00000511538 WDR97A6NE52 1622 aa27.15■■□□□ 1.94
GATB-208ENST00000511538 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
GATB-208ENST00000511538 OSCARQ8IYS5 282 aa27.07■■□□□ 1.92
GATB-208ENST00000511538 GAPVD1Q14C86 1478 aa27■■□□□ 1.91
GATB-208ENST00000511538 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
GATB-208ENST00000511538 GRIN2BQ13224 1484 aa26.99■■□□□ 1.91
GATB-208ENST00000511538 SNAPC4Q5SXM2 1469 aa26.94■■□□□ 1.9
GATB-208ENST00000511538 CHD1O14646 1710 aa26.92■■□□□ 1.9
GATB-208ENST00000511538 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
GATB-208ENST00000511538 MAGI1Q96QZ7 1491 aaPredicted RBP26.91■■□□□ 1.9
GATB-208ENST00000511538 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
GATB-208ENST00000511538 FBLN2P98095 1184 aa26.83■■□□□ 1.89
GATB-208ENST00000511538 SYNJ2O15056 1496 aa26.82■■□□□ 1.88
GATB-208ENST00000511538 CHMP7Q8WUX9 453 aaPredicted RBP26.79■■□□□ 1.88
GATB-208ENST00000511538 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
GATB-208ENST00000511538 ADAMTS12P58397 1594 aa26.7■■□□□ 1.87
GATB-208ENST00000511538 FHAD1B1AJZ9 1412 aa26.69■■□□□ 1.86
GATB-208ENST00000511538 IGF1RP08069 1367 aa26.68■■□□□ 1.86
GATB-208ENST00000511538 CLASP1Q7Z460 1538 aa26.67■■□□□ 1.86
GATB-208ENST00000511538 KIF27Q86VH2 1401 aa26.66■■□□□ 1.86
GATB-208ENST00000511538 GRIN2AQ12879 1464 aa26.65■■□□□ 1.86
GATB-208ENST00000511538 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
GATB-208ENST00000511538 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
GATB-208ENST00000511538 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
GATB-208ENST00000511538 ARHGEF11O15085 1522 aa26.6■■□□□ 1.85
GATB-208ENST00000511538 NUP160Q12769 1436 aa26.58■■□□□ 1.85
GATB-208ENST00000511538 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
GATB-208ENST00000511538 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
GATB-208ENST00000511538 RUSC2Q8N2Y8 1516 aa26.53■■□□□ 1.84
GATB-208ENST00000511538 CUL7Q14999 1698 aa26.47■■□□□ 1.83
GATB-208ENST00000511538 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
GATB-208ENST00000511538 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
GATB-208ENST00000511538 SHROOM2Q13796 1616 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms